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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF ANCESTRAL APICOMPLEXAN MALATE DEHYDROGE LACTATE.
Keywords ANCESTRAL SEQUENCE RECONSTRUCTION, DEHYDROGENASE, APICOMPLEX SPECIFICITY, OXIDOREDUCTASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   4PLV     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   MALATE DEHYDROGENASE  A 305 2260 0
2  Protein   MALATE DEHYDROGENASE  B 318 2406 0
3  Protein   MALATE DEHYDROGENASE  C 318 2390 0
4  Protein   MALATE DEHYDROGENASE  D 307 2292 0
5  Ligand   MALATE DEHYDROGENASE  A 2 0 50
6  Ligand   MALATE DEHYDROGENASE  B 2 0 50
7  Ligand   MALATE DEHYDROGENASE  C 2 0 50
8  Ligand   MALATE DEHYDROGENASE  D 2 0 50
9 Water     461 0 461
total       1717 9348 661
Proteins
Unit 1 GLN3 ARG4 LYS5 LYS6 ILE7 SER8 LEU9 ILE10 GLY11 ALA12 GLY13 ASN14 ILE15 GLY16 GLY17 THR18 LEU19 ALA20 HIS21 LEU22 ILE23 ALA24 GLN25 LYS26 GLU27 LEU28 GLY29 ASP30 VAL31 VAL32 LEU33 PHE34 ASP35 ILE36 VAL37 GLU38 GLY39 MET40 PRO41 GLN42 GLY43 LYS44 ALA45 LEU46 ASP47 ILE48 SER49 HIS50 SER51 SER52 PRO53 ILE54 MET55 GLY56 SER57 ASN58 VAL59 LYS60 ILE61 THR62 GLY63 THR64 ASN65 ASN66 TYR67 GLU68 ASP69 ILE70 LYS71 GLY72 SER73 ASP74 VAL75 VAL76 ILE77 ILE78 THR79 ALA80 GLY81 ILE82 ASP97 LEU98 LEU99 SER100 VAL101 ASN102 ALA103 LYS104 ILE105 MET106 LYS107 ASP108 VAL109 ALA110 GLU111 ASN112 ILE113 LYS114 LYS115 TYR116 CYS117 PRO118 ASN119 ALA120 PHE121 VAL122 ILE123 VAL124 VAL125 THR126 ASN127 PRO128 LEU129 ASP130 VAL131 MET132 VAL133 TYR134 VAL135 LEU136 HIS137 LYS138 TYR139 SER140 GLY141 LEU142 PRO143 HIS144 ASN145 LYS146 VAL147 CYS148 GLY149 MET150 ALA151 GLY152 VAL153 LEU154 ASP155 SER156 SER157 ARG158 PHE159 ARG160 TYR161 PHE162 LEU163 ALA164 GLU165 LYS166 LEU167 ASN168 VAL169 SER170 PRO171 ASN172 ASP173 VAL174 GLN175 ALA176 MET177 VAL178 ILE179 GLY180 GLY181 HIS182 GLY183 ASP184 THR185 MET186 VAL187 PRO188 LEU189 THR190 ARG191 TYR192 CYS193 THR194 VAL195 GLY196 GLY197 ILE198 PRO199 LEU200 THR201 GLU202 PHE203 ILE204 LYS205 GLN206 GLY207 TRP208 ILE209 THR210 GLN211 GLU212 GLU213 ILE214 ASP215 GLU216 ILE217 VAL218 GLU219 ARG220 THR221 ARG222 ASN223 ALA224 GLY225 GLY226 GLU227 ILE228 VAL229 ASN230 LEU231 LEU232 LYS233 THR234 GLY235 SER236 ALA237 TYR238 PHE239 ALA240 PRO241 ALA242 ALA243 SER244 ALA245 ILE246 GLU247 MET248 ALA249 GLU250 SER251 TYR252 LEU253 LYS254 ASP255 LYS256 LYS257 ARG258 ILE259 LEU260 PRO261 CYS262 SER263 ALA264 TYR265 LEU266 GLU267 GLY268 GLN269 TYR270 GLY271 VAL272 LYS273 ASP274 LEU275 PHE276 VAL277 GLY278 VAL279 PRO280 VAL281 ILE282 ILE283 GLY284 LYS285 ASN286 GLY287 VAL288 GLU289 LYS290 ILE291 ILE292 GLU293 LEU294 GLU295 LEU296 THR297 GLU298 GLU299 GLU300 GLN301 GLU302 MET303 PHE304 ASP305 LYS306 SER307 VAL308 GLU309 SER310 VAL311 ARG312 GLU313 LEU314 VAL315 GLU316 THR317 VAL318 LYS319 LYS320 LEU321
Unit 2 GLN3 ARG4 LYS5 LYS6 ILE7 SER8 LEU9 ILE10 GLY11 ALA12 GLY13 ASN14 ILE15 GLY16 GLY17 THR18 LEU19 ALA20 HIS21 LEU22 ILE23 ALA24 GLN25 LYS26 GLU27 LEU28 GLY29 ASP30 VAL31 VAL32 LEU33 PHE34 ASP35 ILE36 VAL37 GLU38 GLY39 MET40 PRO41 GLN42 GLY43 LYS44 ALA45 LEU46 ASP47 ILE48 SER49 HIS50 SER51 SER52 PRO53 ILE54 MET55 GLY56 SER57 ASN58 VAL59 LYS60 ILE61 THR62 GLY63 THR64 ASN65 ASN66 TYR67 GLU68 ASP69 ILE70 LYS71 GLY72 SER73 ASP74 VAL75 VAL76 ILE77 ILE78 THR79 ALA80 GLY81 ILE82 PRO83 ARG84 LYS85 PRO86 GLY87 LYS88 SER89 ASP90 LYS91 GLU92 TRP93 SER94 ARG95 ASP96 ASP97 LEU98 LEU99 SER100 VAL101 ASN102 ALA103 LYS104 ILE105 MET106 LYS107 ASP108 VAL109 ALA110 GLU111 ASN112 ILE113 LYS114 LYS115 TYR116 CYS117 PRO118 ASN119 ALA120 PHE121 VAL122 ILE123 VAL124 VAL125 THR126 ASN127 PRO128 LEU129 ASP130 VAL131 MET132 VAL133 TYR134 VAL135 LEU136 HIS137 LYS138 TYR139 SER140 GLY141 LEU142 PRO143 HIS144 ASN145 LYS146 VAL147 CYS148 GLY149 MET150 ALA151 GLY152 VAL153 LEU154 ASP155 SER156 SER157 ARG158 PHE159 ARG160 TYR161 PHE162 LEU163 ALA164 GLU165 LYS166 LEU167 ASN168 VAL169 SER170 PRO171 ASN172 ASP173 VAL174 GLN175 ALA176 MET177 VAL178 ILE179 GLY180 GLY181 HIS182 GLY183 ASP184 THR185 MET186 VAL187 PRO188 LEU189 THR190 ARG191 TYR192 CYS193 THR194 VAL195 GLY196 GLY197 ILE198 PRO199 LEU200 THR201 GLU202 PHE203 ILE204 LYS205 GLN206 GLY207 TRP208 ILE209 THR210 GLN211 GLU212 GLU213 ILE214 ASP215 GLU216 ILE217 VAL218 GLU219 ARG220 THR221 ARG222 ASN223 ALA224 GLY225 GLY226 GLU227 ILE228 VAL229 ASN230 LEU231 LEU232 LYS233 THR234 GLY235 SER236 ALA237 TYR238 PHE239 ALA240 PRO241 ALA242 ALA243 SER244 ALA245 ILE246 GLU247 MET248 ALA249 GLU250 SER251 TYR252 LEU253 LYS254 ASP255 LYS256 LYS257 ARG258 ILE259 LEU260 PRO261 CYS262 SER263 ALA264 TYR265 LEU266 GLU267 GLY268 GLN269 TYR270 GLY271 VAL272 LYS273 ASP274 LEU275 PHE276 VAL277 GLY278 VAL279 PRO280 VAL281 ILE282 ILE283 GLY284 LYS285 ASN286 GLY287 VAL288 GLU289 LYS290 ILE291 ILE292 GLU293 LEU294 GLU295 LEU296 THR297 GLU298 GLU299 GLU300 GLN301 GLU302 MET303 PHE304 ASP305 LYS306 SER307 VAL308 GLU309 SER310 VAL311 ARG312 GLU313 LEU314 VAL315 GLU316 THR317 VAL318 LYS319 LYS320
Unit 3 GLN3 ARG4 LYS5 LYS6 ILE7 SER8 LEU9 ILE10 GLY11 ALA12 GLY13 ASN14 ILE15 GLY16 GLY17 THR18 LEU19 ALA20 HIS21 LEU22 ILE23 ALA24 GLN25 LYS26 GLU27 LEU28 GLY29 ASP30 VAL31 VAL32 LEU33 PHE34 ASP35 ILE36 VAL37 GLU38 GLY39 MET40 PRO41 GLN42 GLY43 LYS44 ALA45 LEU46 ASP47 ILE48 SER49 HIS50 SER51 SER52 PRO53 ILE54 MET55 GLY56 SER57 ASN58 VAL59 LYS60 ILE61 THR62 GLY63 THR64 ASN65 ASN66 TYR67 GLU68 ASP69 ILE70 LYS71 GLY72 SER73 ASP74 VAL75 VAL76 ILE77 ILE78 THR79 ALA80 GLY81 ILE82 PRO83 ARG84 LYS85 PRO86 GLY87 LYS88 SER89 ASP90 LYS91 GLU92 TRP93 SER94 ARG95 ASP96 ASP97 LEU98 LEU99 SER100 VAL101 ASN102 ALA103 LYS104 ILE105 MET106 LYS107 ASP108 VAL109 ALA110 GLU111 ASN112 ILE113 LYS114 LYS115 TYR116 CYS117 PRO118 ASN119 ALA120 PHE121 VAL122 ILE123 VAL124 VAL125 THR126 ASN127 PRO128 LEU129 ASP130 VAL131 MET132 VAL133 TYR134 VAL135 LEU136 HIS137 LYS138 TYR139 SER140 GLY141 LEU142 PRO143 HIS144 ASN145 LYS146 VAL147 CYS148 GLY149 MET150 ALA151 GLY152 VAL153 LEU154 ASP155 SER156 SER157 ARG158 PHE159 ARG160 TYR161 PHE162 LEU163 ALA164 GLU165 LYS166 LEU167 ASN168 VAL169 SER170 PRO171 ASN172 ASP173 VAL174 GLN175 ALA176 MET177 VAL178 ILE179 GLY180 GLY181 HIS182 GLY183 ASP184 THR185 MET186 VAL187 PRO188 LEU189 THR190 ARG191 TYR192 CYS193 THR194 VAL195 GLY196 GLY197 ILE198 PRO199 LEU200 THR201 GLU202 PHE203 ILE204 LYS205 GLN206 GLY207 TRP208 ILE209 THR210 GLN211 GLU212 GLU213 ILE214 ASP215 GLU216 ILE217 VAL218 GLU219 ARG220 THR221 ARG222 ASN223 ALA224 GLY225 GLY226 GLU227 ILE228 VAL229 ASN230 LEU231 LEU232 LYS233 THR234 GLY235 SER236 ALA237 TYR238 PHE239 ALA240 PRO241 ALA242 ALA243 SER244 ALA245 ILE246 GLU247 MET248 ALA249 GLU250 SER251 TYR252 LEU253 LYS254 ASP255 LYS256 LYS257 ARG258 ILE259 LEU260 PRO261 CYS262 SER263 ALA264 TYR265 LEU266 GLU267 GLY268 GLN269 TYR270 GLY271 VAL272 LYS273 ASP274 LEU275 PHE276 VAL277 GLY278 VAL279 PRO280 VAL281 ILE282 ILE283 GLY284 LYS285 ASN286 GLY287 VAL288 GLU289 LYS290 ILE291 ILE292 GLU293 LEU294 GLU295 LEU296 THR297 GLU298 GLU299 GLU300 GLN301 GLU302 MET303 PHE304 ASP305 LYS306 SER307 VAL308 GLU309 SER310 VAL311 ARG312 GLU313 LEU314 VAL315 GLU316 THR317 VAL318 LYS319 LYS320
Unit 4 THR2 GLN3 ARG4 LYS5 LYS6 ILE7 SER8 LEU9 ILE10 GLY11 ALA12 GLY13 ASN14 ILE15 GLY16 GLY17 THR18 LEU19 ALA20 HIS21 LEU22 ILE23 ALA24 GLN25 LYS26 GLU27 LEU28 GLY29 ASP30 VAL31 VAL32 LEU33 PHE34 ASP35 ILE36 VAL37 GLU38 GLY39 MET40 PRO41 GLN42 GLY43 LYS44 ALA45 LEU46 ASP47 ILE48 SER49 HIS50 SER51 SER52 PRO53 ILE54 MET55 GLY56 SER57 ASN58 VAL59 LYS60 ILE61 THR62 GLY63 THR64 ASN65 ASN66 TYR67 GLU68 ASP69 ILE70 LYS71 GLY72 SER73 ASP74 VAL75 VAL76 ILE77 ILE78 THR79 ALA80 GLY81 ILE82 ASP96 ASP97 LEU98 LEU99 SER100 VAL101 ASN102 ALA103 LYS104 ILE105 MET106 LYS107 ASP108 VAL109 ALA110 GLU111 ASN112 ILE113 LYS114 LYS115 TYR116 CYS117 PRO118 ASN119 ALA120 PHE121 VAL122 ILE123 VAL124 VAL125 THR126 ASN127 PRO128 LEU129 ASP130 VAL131 MET132 VAL133 TYR134 VAL135 LEU136 HIS137 LYS138 TYR139 SER140 GLY141 LEU142 PRO143 HIS144 ASN145 LYS146 VAL147 CYS148 GLY149 MET150 ALA151 GLY152 VAL153 LEU154 ASP155 SER156 SER157 ARG158 PHE159 ARG160 TYR161 PHE162 LEU163 ALA164 GLU165 LYS166 LEU167 ASN168 VAL169 SER170 PRO171 ASN172 ASP173 VAL174 GLN175 ALA176 MET177 VAL178 ILE179 GLY180 GLY181 HIS182 GLY183 ASP184 THR185 MET186 VAL187 PRO188 LEU189 THR190 ARG191 TYR192 CYS193 THR194 VAL195 GLY196 GLY197 ILE198 PRO199 LEU200 THR201 GLU202 PHE203 ILE204 LYS205 GLN206 GLY207 TRP208 ILE209 THR210 GLN211 GLU212 GLU213 ILE214 ASP215 GLU216 ILE217 VAL218 GLU219 ARG220 THR221 ARG222 ASN223 ALA224 GLY225 GLY226 GLU227 ILE228 VAL229 ASN230 LEU231 LEU232 LYS233 THR234 GLY235 SER236 ALA237 TYR238 PHE239 ALA240 PRO241 ALA242 ALA243 SER244 ALA245 ILE246 GLU247 MET248 ALA249 GLU250 SER251 TYR252 LEU253 LYS254 ASP255 LYS256 LYS257 ARG258 ILE259 LEU260 PRO261 CYS262 SER263 ALA264 TYR265 LEU266 GLU267 GLY268 GLN269 TYR270 GLY271 VAL272 LYS273 ASP274 LEU275 PHE276 VAL277 GLY278 VAL279 PRO280 VAL281 ILE282 ILE283 GLY284 LYS285 ASN286 GLY287 VAL288 GLU289 LYS290 ILE291 ILE292 GLU293 LEU294 GLU295 LEU296 THR297 GLU298 GLU299 GLU300 GLN301 GLU302 MET303 PHE304 ASP305 LYS306 SER307 VAL308 GLU309 SER310 VAL311 ARG312 GLU313 LEU314 VAL315 GLU316 THR317 VAL318 LYS319 LYS320 LEU321
Ligands
Unit 5 NAI401 2OP402
Unit 6 NAI401 2OP402
Unit 7 NAI401 2OP402
Unit 8 NAI401 2OP402
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany