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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF ANCESTRAL APICOMPLEXAN MALATE DEHYDROGE OXAMATE.
Keywords ANCESTRAL SEQUENCE RECONSTRUCTION, DEHYDROGENASE, APICOMPLEX SPECIFICITY, OXIDOREDUCTASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   4PLH     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   MALATE DEHYDROGENASE  A 313 2368 0
2  Protein   MALATE DEHYDROGENASE  B 313 2359 0
3  Protein   MALATE DEHYDROGENASE  C 305 2302 0
4  Protein   MALATE DEHYDROGENASE  D 316 2377 0
5  Ligand   MALATE DEHYDROGENASE  A 3 0 51
6  Ligand   MALATE DEHYDROGENASE  B 2 0 50
7  Ligand   MALATE DEHYDROGENASE  C 2 0 50
8  Ligand   MALATE DEHYDROGENASE  D 3 0 51
9 Water     518 0 518
total       1775 9406 720
Proteins
Unit 1 GLN3 ARG4 LYS5 LYS6 ILE7 SER8 LEU9 ILE10 GLY11 ALA12 GLY13 ASN14 ILE15 GLY16 GLY17 THR18 LEU19 ALA20 HIS21 LEU22 ILE23 ALA24 GLN25 LYS26 GLU27 LEU28 GLY29 ASP30 VAL31 VAL32 LEU33 PHE34 ASP35 ILE36 VAL37 GLU38 GLY39 MET40 PRO41 GLN42 GLY43 LYS44 ALA45 LEU46 ASP47 ILE48 SER49 HIS50 SER51 SER52 PRO53 ILE54 MET55 GLY56 SER57 ASN58 VAL59 LYS60 ILE61 THR62 GLY63 THR64 ASN65 ASN66 TYR67 GLU68 ASP69 ILE70 LYS71 GLY72 SER73 ASP74 VAL75 VAL76 ILE77 ILE78 THR79 ALA80 GLY81 ILE82 PRO83 ARG84 SER89 ARG90 ASP91 ASP92 LEU93 LEU94 SER95 VAL96 ASN97 ALA98 LYS99 ILE100 MET101 LYS102 ASP103 VAL104 ALA105 GLU106 ASN107 ILE108 LYS109 LYS110 TYR111 CYS112 PRO113 ASN114 ALA115 PHE116 VAL117 ILE118 VAL119 VAL120 THR121 ASN122 PRO123 LEU124 ASP125 VAL126 MET127 VAL128 TYR129 VAL130 LEU131 HIS132 LYS133 TYR134 SER135 GLY136 LEU137 PRO138 HIS139 ASN140 LYS141 VAL142 CYS143 GLY144 MET145 ALA146 GLY147 VAL148 LEU149 ASP150 SER151 SER152 ARG153 PHE154 ARG155 TYR156 PHE157 LEU158 ALA159 GLU160 LYS161 LEU162 ASN163 VAL164 SER165 PRO166 ASN167 ASP168 VAL169 GLN170 ALA171 MET172 VAL173 ILE174 GLY175 GLY176 HIS177 GLY178 ASP179 THR180 MET181 VAL182 PRO183 LEU184 THR185 ARG186 TYR187 CYS188 THR189 VAL190 GLY191 GLY192 ILE193 PRO194 LEU195 THR196 GLU197 PHE198 ILE199 LYS200 GLN201 GLY202 TRP203 ILE204 THR205 GLN206 GLU207 GLU208 ILE209 ASP210 GLU211 ILE212 VAL213 GLU214 ARG215 THR216 ARG217 ASN218 ALA219 GLY220 GLY221 GLU222 ILE223 VAL224 ASN225 LEU226 LEU227 LYS228 THR229 GLY230 SER231 ALA232 TYR233 PHE234 ALA235 PRO236 ALA237 ALA238 SER239 ALA240 ILE241 GLU242 MET243 ALA244 GLU245 SER246 TYR247 LEU248 LYS249 ASP250 LYS251 LYS252 ARG253 ILE254 LEU255 PRO256 CYS257 SER258 ALA259 TYR260 LEU261 GLU262 GLY263 GLN264 TYR265 GLY266 VAL267 LYS268 ASP269 LEU270 PHE271 VAL272 GLY273 VAL274 PRO275 VAL276 ILE277 ILE278 GLY279 LYS280 ASN281 GLY282 VAL283 GLU284 LYS285 ILE286 ILE287 GLU288 LEU289 GLU290 LEU291 THR292 GLU293 GLU294 GLU295 GLN296 GLU297 MET298 PHE299 ASP300 LYS301 SER302 VAL303 GLU304 SER305 VAL306 ARG307 GLU308 LEU309 VAL310 GLU311 THR312 VAL313 LYS314 LYS315 LEU316 ASN317 ALA318 LEU319
Unit 2 GLN3 ARG4 LYS5 LYS6 ILE7 SER8 LEU9 ILE10 GLY11 ALA12 GLY13 ASN14 ILE15 GLY16 GLY17 THR18 LEU19 ALA20 HIS21 LEU22 ILE23 ALA24 GLN25 LYS26 GLU27 LEU28 GLY29 ASP30 VAL31 VAL32 LEU33 PHE34 ASP35 ILE36 VAL37 GLU38 GLY39 MET40 PRO41 GLN42 GLY43 LYS44 ALA45 LEU46 ASP47 ILE48 SER49 HIS50 SER51 SER52 PRO53 ILE54 MET55 GLY56 SER57 ASN58 VAL59 LYS60 ILE61 THR62 GLY63 THR64 ASN65 ASN66 TYR67 GLU68 ASP69 ILE70 LYS71 GLY72 SER73 ASP74 VAL75 VAL76 ILE77 ILE78 THR79 ALA80 GLY81 ILE82 PRO83 ARG84 LYS85 PRO86 GLY87 MET88 SER89 ARG90 ASP91 ASP92 LEU93 LEU94 SER95 VAL96 ASN97 ALA98 LYS99 ILE100 MET101 LYS102 ASP103 VAL104 ALA105 GLU106 ASN107 ILE108 LYS109 LYS110 TYR111 CYS112 PRO113 ASN114 ALA115 PHE116 VAL117 ILE118 VAL119 VAL120 THR121 ASN122 PRO123 LEU124 ASP125 VAL126 MET127 VAL128 TYR129 VAL130 LEU131 HIS132 LYS133 TYR134 SER135 GLY136 LEU137 PRO138 HIS139 ASN140 LYS141 VAL142 CYS143 GLY144 MET145 ALA146 GLY147 VAL148 LEU149 ASP150 SER151 SER152 ARG153 PHE154 ARG155 TYR156 PHE157 LEU158 ALA159 GLU160 LYS161 LEU162 ASN163 VAL164 SER165 PRO166 ASN167 ASP168 VAL169 GLN170 ALA171 MET172 VAL173 ILE174 GLY175 GLY176 HIS177 GLY178 ASP179 THR180 MET181 VAL182 PRO183 LEU184 THR185 ARG186 TYR187 CYS188 THR189 VAL190 GLY191 GLY192 ILE193 PRO194 LEU195 THR196 GLU197 PHE198 ILE199 LYS200 GLN201 GLY202 TRP203 ILE204 THR205 GLN206 GLU207 GLU208 ILE209 ASP210 GLU211 ILE212 VAL213 GLU214 ARG215 THR216 ARG217 ASN218 ALA219 GLY220 GLY221 GLU222 ILE223 VAL224 ASN225 LEU226 LEU227 LYS228 THR229 GLY230 SER231 ALA232 TYR233 PHE234 ALA235 PRO236 ALA237 ALA238 SER239 ALA240 ILE241 GLU242 MET243 ALA244 GLU245 SER246 TYR247 LEU248 LYS249 ASP250 LYS251 LYS252 ARG253 ILE254 LEU255 PRO256 CYS257 SER258 ALA259 TYR260 LEU261 GLU262 GLY263 GLN264 TYR265 GLY266 VAL267 LYS268 ASP269 LEU270 PHE271 VAL272 GLY273 VAL274 PRO275 VAL276 ILE277 ILE278 GLY279 LYS280 ASN281 GLY282 VAL283 GLU284 LYS285 ILE286 ILE287 GLU288 LEU289 GLU290 LEU291 THR292 GLU293 GLU294 GLU295 GLN296 GLU297 MET298 PHE299 ASP300 LYS301 SER302 VAL303 GLU304 SER305 VAL306 ARG307 GLU308 LEU309 VAL310 GLU311 THR312 VAL313 LYS314 LYS315
Unit 3 GLN3 ARG4 LYS5 LYS6 ILE7 SER8 LEU9 ILE10 GLY11 ALA12 GLY13 ASN14 ILE15 GLY16 GLY17 THR18 LEU19 ALA20 HIS21 LEU22 ILE23 ALA24 GLN25 LYS26 GLU27 LEU28 GLY29 ASP30 VAL31 VAL32 LEU33 PHE34 ASP35 ILE36 VAL37 GLU38 GLY39 MET40 PRO41 GLN42 GLY43 LYS44 ALA45 LEU46 ASP47 ILE48 SER49 HIS50 SER51 SER52 PRO53 ILE54 MET55 GLY56 SER57 ASN58 VAL59 LYS60 ILE61 THR62 GLY63 THR64 ASN65 ASN66 TYR67 GLU68 ASP69 ILE70 LYS71 GLY72 SER73 ASP74 VAL75 VAL76 ILE77 ILE78 THR79 ALA80 GLY81 ILE82 ASP92 LEU93 LEU94 SER95 VAL96 ASN97 ALA98 LYS99 ILE100 MET101 LYS102 ASP103 VAL104 ALA105 GLU106 ASN107 ILE108 LYS109 LYS110 TYR111 CYS112 PRO113 ASN114 ALA115 PHE116 VAL117 ILE118 VAL119 VAL120 THR121 ASN122 PRO123 LEU124 ASP125 VAL126 MET127 VAL128 TYR129 VAL130 LEU131 HIS132 LYS133 TYR134 SER135 GLY136 LEU137 PRO138 HIS139 ASN140 LYS141 VAL142 CYS143 GLY144 MET145 ALA146 GLY147 VAL148 LEU149 ASP150 SER151 SER152 ARG153 PHE154 ARG155 TYR156 PHE157 LEU158 ALA159 GLU160 LYS161 LEU162 ASN163 VAL164 SER165 PRO166 ASN167 ASP168 VAL169 GLN170 ALA171 MET172 VAL173 ILE174 GLY175 GLY176 HIS177 GLY178 ASP179 THR180 MET181 VAL182 PRO183 LEU184 THR185 ARG186 TYR187 CYS188 THR189 VAL190 GLY191 GLY192 ILE193 PRO194 LEU195 THR196 GLU197 PHE198 ILE199 LYS200 GLN201 GLY202 TRP203 ILE204 THR205 GLN206 GLU207 GLU208 ILE209 ASP210 GLU211 ILE212 VAL213 GLU214 ARG215 THR216 ARG217 ASN218 ALA219 GLY220 GLY221 GLU222 ILE223 VAL224 ASN225 LEU226 LEU227 LYS228 THR229 GLY230 SER231 ALA232 TYR233 PHE234 ALA235 PRO236 ALA237 ALA238 SER239 ALA240 ILE241 GLU242 MET243 ALA244 GLU245 SER246 TYR247 LEU248 LYS249 ASP250 LYS251 LYS252 ARG253 ILE254 LEU255 PRO256 CYS257 SER258 ALA259 TYR260 LEU261 GLU262 GLY263 GLN264 TYR265 GLY266 VAL267 LYS268 ASP269 LEU270 PHE271 VAL272 GLY273 VAL274 PRO275 VAL276 ILE277 ILE278 GLY279 LYS280 ASN281 GLY282 VAL283 GLU284 LYS285 ILE286 ILE287 GLU288 LEU289 GLU290 LEU291 THR292 GLU293 GLU294 GLU295 GLN296 GLU297 MET298 PHE299 ASP300 LYS301 SER302 VAL303 GLU304 SER305 VAL306 ARG307 GLU308 LEU309 VAL310 GLU311 THR312 VAL313 LYS314 LYS315 LEU316
Unit 4 THR2 GLN3 ARG4 LYS5 LYS6 ILE7 SER8 LEU9 ILE10 GLY11 ALA12 GLY13 ASN14 ILE15 GLY16 GLY17 THR18 LEU19 ALA20 HIS21 LEU22 ILE23 ALA24 GLN25 LYS26 GLU27 LEU28 GLY29 ASP30 VAL31 VAL32 LEU33 PHE34 ASP35 ILE36 VAL37 GLU38 GLY39 MET40 PRO41 GLN42 GLY43 LYS44 ALA45 LEU46 ASP47 ILE48 SER49 HIS50 SER51 SER52 PRO53 ILE54 MET55 GLY56 SER57 ASN58 VAL59 LYS60 ILE61 THR62 GLY63 THR64 ASN65 ASN66 TYR67 GLU68 ASP69 ILE70 LYS71 GLY72 SER73 ASP74 VAL75 VAL76 ILE77 ILE78 THR79 ALA80 GLY81 ILE82 PRO83 ARG84 LYS85 PRO86 GLY87 MET88 SER89 ARG90 ASP91 ASP92 LEU93 LEU94 SER95 VAL96 ASN97 ALA98 LYS99 ILE100 MET101 LYS102 ASP103 VAL104 ALA105 GLU106 ASN107 ILE108 LYS109 LYS110 TYR111 CYS112 PRO113 ASN114 ALA115 PHE116 VAL117 ILE118 VAL119 VAL120 THR121 ASN122 PRO123 LEU124 ASP125 VAL126 MET127 VAL128 TYR129 VAL130 LEU131 HIS132 LYS133 TYR134 SER135 GLY136 LEU137 PRO138 HIS139 ASN140 LYS141 VAL142 CYS143 GLY144 MET145 ALA146 GLY147 VAL148 LEU149 ASP150 SER151 SER152 ARG153 PHE154 ARG155 TYR156 PHE157 LEU158 ALA159 GLU160 LYS161 LEU162 ASN163 VAL164 SER165 PRO166 ASN167 ASP168 VAL169 GLN170 ALA171 MET172 VAL173 ILE174 GLY175 GLY176 HIS177 GLY178 ASP179 THR180 MET181 VAL182 PRO183 LEU184 THR185 ARG186 TYR187 CYS188 THR189 VAL190 GLY191 GLY192 ILE193 PRO194 LEU195 THR196 GLU197 PHE198 ILE199 LYS200 GLN201 GLY202 TRP203 ILE204 THR205 GLN206 GLU207 GLU208 ILE209 ASP210 GLU211 ILE212 VAL213 GLU214 ARG215 THR216 ARG217 ASN218 ALA219 GLY220 GLY221 GLU222 ILE223 VAL224 ASN225 LEU226 LEU227 LYS228 THR229 GLY230 SER231 ALA232 TYR233 PHE234 ALA235 PRO236 ALA237 ALA238 SER239 ALA240 ILE241 GLU242 MET243 ALA244 GLU245 SER246 TYR247 LEU248 LYS249 ASP250 LYS251 LYS252 ARG253 ILE254 LEU255 PRO256 CYS257 SER258 ALA259 TYR260 LEU261 GLU262 GLY263 GLN264 TYR265 GLY266 VAL267 LYS268 ASP269 LEU270 PHE271 VAL272 GLY273 VAL274 PRO275 VAL276 ILE277 ILE278 GLY279 LYS280 ASN281 GLY282 VAL283 GLU284 LYS285 ILE286 ILE287 GLU288 LEU289 GLU290 LEU291 THR292 GLU293 GLU294 GLU295 GLN296 GLU297 MET298 PHE299 ASP300 LYS301 SER302 VAL303 GLU304 SER305 VAL306 ARG307 GLU308 LEU309 VAL310 GLU311 THR312 VAL313 LYS314 LYS315 LEU316 ASN317
Ligands
Unit 5 OXM401 NA402 NAI403
Unit 6 OXM401 NAI402
Unit 7 OXM401 NAI402
Unit 8 OXM401 NA402 NAI403
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany