4PHH - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF YPT7 COVALENTLY MODIFIED WITH GNP
• Keywords: YPT7, ACRYL-NUCLEOTIDES, AGNP, COVALENT, GNP, GPPNHP, ENDOCY EXOCYTOSIS
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	4PHH	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	GTP-BINDING PROTEIN YPT7	A	172	1314	0
2	Protein	GTP-BINDING PROTEIN YPT7	B	172	1292	0
3	Protein	GTP-BINDING PROTEIN YPT7	C	169	1295	0
4	Protein	GTP-BINDING PROTEIN YPT7	D	165	1252	0
5	Ligand	GTP-BINDING PROTEIN YPT7	A	3	0	42
6	Ligand	GTP-BINDING PROTEIN YPT7	B	3	0	42
7	Ligand	GTP-BINDING PROTEIN YPT7	C	2	0	41
8	Ligand	GTP-BINDING PROTEIN YPT7	D	3	0	42
9	Water			17	0	17
total				706	5153	184

Proteins

Unit 1	ILE 8 LEU 9 LYS 10 VAL 11 ILE 12 ILE 13 LEU 14 GLY 15 ASP 16 SER 17 GLY 18 VAL 19 GLY 20 LYS 21 THR 22 SER 23 LEU 24 MET 25 HIS 26 ARG 27 TYR 28 VAL 29 ASN 30 ASP 31 LYS 32 TYR 33 SER 34 CYS 35 GLN 36 TYR 37 LYS 38 ALA 39 THR 40 ILE 41 GLY 42 ALA 43 ASP 44 PHE 45 LEU 46 THR 47 LYS 48 GLU 49 VAL 50 THR 51 VAL 52 ASP 53 GLY 54 ASP 55 LYS 56 VAL 57 ALA 58 THR 59 MET 60 GLN 61 VAL 62 TRP 63 ASP 64 THR 65 ALA 66 GLY 67 GLN 68 GLU 69 ARG 70 PHE 71 GLN 72 SER 73 VAL 76 ALA 77 PHE 78 TYR 79 ARG 80 GLY 81 ALA 82 ASP 83 CYS 84 CYS 85 VAL 86 LEU 87 VAL 88 TYR 89 ASP 90 VAL 91 THR 92 ASN 93 ALA 94 SER 95 SER 96 PHE 97 GLU 98 ASN 99 ILE 100 LYS 101 SER 102 TRP 103 ARG 104 ASP 105 GLU 106 PHE 107 LEU 108 VAL 109 HIS 110 ALA 111 ASN 112 VAL 113 ASN 114 SER 115 PRO 116 GLU 117 THR 118 PHE 119 PRO 120 PHE 121 VAL 122 ILE 123 LEU 124 GLY 125 ASN 126 LYS 127 ILE 128 ASP 129 ALA 130 GLU 131 GLU 132 SER 133 LYS 134 LYS 135 ILE 136 VAL 137 SER 138 GLU 139 LYS 140 SER 141 ALA 142 GLN 143 GLU 144 LEU 145 ALA 146 LYS 147 SER 148 LEU 149 GLY 150 ASP 151 ILE 152 PRO 153 LEU 154 PHE 155 LEU 156 THR 157 SER 158 ALA 159 LYS 160 ASN 161 ALA 162 ILE 163 ASN 164 VAL 165 ASP 166 THR 167 ALA 168 PHE 169 GLU 170 GLU 171 ILE 172 ALA 173 ARG 174 SER 175 ALA 176 LEU 177 GLN 178 GLN 179 ASN 180 GLN 181
Unit 2	ILE 8 LEU 9 LYS 10 VAL 11 ILE 12 ILE 13 LEU 14 GLY 15 ASP 16 SER 17 GLY 18 VAL 19 GLY 20 LYS 21 THR 22 SER 23 LEU 24 MET 25 HIS 26 ARG 27 TYR 28 VAL 29 ASN 30 ASP 31 LYS 32 TYR 33 SER 34 CYS 35 ALA 39 THR 40 ILE 41 GLY 42 ALA 43 ASP 44 PHE 45 LEU 46 THR 47 LYS 48 GLU 49 VAL 50 THR 51 VAL 52 ASP 53 GLY 54 ASP 55 LYS 56 VAL 57 ALA 58 THR 59 MET 60 GLN 61 VAL 62 TRP 63 ASP 64 THR 65 ALA 66 GLY 67 GLN 68 GLU 69 ARG 70 PHE 71 GLN 72 SER 73 LEU 74 GLY 75 VAL 76 ALA 77 PHE 78 TYR 79 ARG 80 GLY 81 ALA 82 ASP 83 CYS 84 CYS 85 VAL 86 LEU 87 VAL 88 TYR 89 ASP 90 VAL 91 THR 92 ASN 93 ALA 94 SER 95 SER 96 PHE 97 GLU 98 ASN 99 ILE 100 LYS 101 SER 102 TRP 103 ARG 104 ASP 105 GLU 106 PHE 107 LEU 108 VAL 109 HIS 110 ALA 111 ASN 112 VAL 113 ASN 114 SER 115 PRO 116 GLU 117 THR 118 PHE 119 PRO 120 PHE 121 VAL 122 ILE 123 LEU 124 GLY 125 ASN 126 LYS 127 ILE 128 ASP 129 ALA 130 GLU 131 GLU 132 SER 133 LYS 134 LYS 135 ILE 136 VAL 137 SER 138 GLU 139 LYS 140 SER 141 ALA 142 GLN 143 GLU 144 LEU 145 ALA 146 LYS 147 SER 148 LEU 149 GLY 150 ASP 151 ILE 152 PRO 153 LEU 154 PHE 155 LEU 156 THR 157 SER 158 ALA 159 LYS 160 ASN 161 ALA 162 ILE 163 ASN 164 VAL 165 ASP 166 THR 167 ALA 168 PHE 169 GLU 170 GLU 171 ILE 172 ALA 173 ARG 174 SER 175 ALA 176 LEU 177 GLN 178 GLN 179 ASN 180 GLN 181 ALA 182
Unit 3	ILE 8 LEU 9 LYS 10 VAL 11 ILE 12 ILE 13 LEU 14 GLY 15 ASP 16 SER 17 GLY 18 VAL 19 GLY 20 LYS 21 THR 22 SER 23 LEU 24 MET 25 HIS 26 ARG 27 TYR 28 VAL 29 ASN 30 ASP 31 LYS 32 TYR 33 SER 34 CYS 35 GLN 36 TYR 37 LYS 38 ALA 39 THR 40 ILE 41 GLY 42 ALA 43 ASP 44 PHE 45 LEU 46 THR 47 LYS 48 GLU 49 VAL 50 VAL 57 ALA 58 THR 59 MET 60 GLN 61 VAL 62 TRP 63 ASP 64 THR 65 ALA 66 GLY 67 GLN 68 GLU 69 ARG 70 PHE 71 GLN 72 SER 73 LEU 74 GLY 75 VAL 76 ALA 77 PHE 78 TYR 79 ARG 80 GLY 81 ALA 82 ASP 83 CYS 84 CYS 85 VAL 86 LEU 87 VAL 88 TYR 89 ASP 90 VAL 91 THR 92 ASN 93 ALA 94 SER 95 SER 96 PHE 97 GLU 98 ASN 99 ILE 100 LYS 101 SER 102 TRP 103 ARG 104 ASP 105 GLU 106 PHE 107 LEU 108 VAL 109 HIS 110 ALA 111 ASN 112 VAL 113 ASN 114 SER 115 PRO 116 GLU 117 THR 118 PHE 119 PRO 120 PHE 121 VAL 122 ILE 123 LEU 124 GLY 125 ASN 126 LYS 127 ILE 128 ASP 129 ALA 130 GLU 131 GLU 132 SER 133 LYS 134 LYS 135 ILE 136 VAL 137 SER 138 GLU 139 LYS 140 SER 141 ALA 142 GLN 143 GLU 144 LEU 145 ALA 146 LYS 147 SER 148 LEU 149 GLY 150 ASP 151 ILE 152 PRO 153 LEU 154 PHE 155 LEU 156 THR 157 SER 158 ALA 159 LYS 160 ASN 161 ALA 162 ILE 163 ASN 164 VAL 165 ASP 166 THR 167 ALA 168 PHE 169 GLU 170 GLU 171 ILE 172 ALA 173 ARG 174 SER 175 ALA 176 LEU 177 GLN 178 GLN 179 ASN 180 GLN 181 ALA 182
Unit 4	ASN 7 ILE 8 LEU 9 LYS 10 VAL 11 ILE 12 ILE 13 LEU 14 GLY 15 ASP 16 SER 17 GLY 18 VAL 19 GLY 20 LYS 21 THR 22 SER 23 LEU 24 MET 25 HIS 26 ARG 27 TYR 28 VAL 29 ASN 30 ASP 31 LYS 32 TYR 33 SER 34 CYS 35 LYS 38 ALA 39 THR 40 ILE 41 GLY 42 ALA 43 ASP 44 PHE 45 LEU 46 THR 47 LYS 48 GLU 49 VAL 50 THR 51 VAL 57 ALA 58 THR 59 MET 60 GLN 61 VAL 62 TRP 63 ASP 64 THR 65 ALA 66 GLY 67 GLN 68 GLU 69 ARG 70 GLY 75 VAL 76 ALA 77 PHE 78 TYR 79 ARG 80 GLY 81 ALA 82 ASP 83 CYS 84 CYS 85 VAL 86 LEU 87 VAL 88 TYR 89 ASP 90 VAL 91 THR 92 ASN 93 ALA 94 SER 95 SER 96 PHE 97 GLU 98 ASN 99 ILE 100 LYS 101 SER 102 TRP 103 ARG 104 ASP 105 GLU 106 PHE 107 LEU 108 VAL 109 HIS 110 ALA 111 ASN 112 VAL 113 ASN 114 SER 115 PRO 116 GLU 117 THR 118 PHE 119 PRO 120 PHE 121 VAL 122 ILE 123 LEU 124 GLY 125 ASN 126 LYS 127 ILE 128 ASP 129 ALA 130 GLU 131 GLU 132 SER 133 LYS 134 LYS 135 ILE 136 VAL 137 SER 138 GLU 139 LYS 140 SER 141 ALA 142 GLN 143 GLU 144 LEU 145 ALA 146 LYS 147 SER 148 LEU 149 GLY 150 ASP 151 ILE 152 PRO 153 LEU 154 PHE 155 LEU 156 THR 157 SER 158 ALA 159 LYS 160 ASN 161 ALA 162 ILE 163 ASN 164 VAL 165 ASP 166 THR 167 ALA 168 PHE 169 GLU 170 GLU 171 ILE 172 ALA 173 ARG 174 SER 175 ALA 176 LEU 177 GLN 178 GLN 179 ASN 180 GLN 181 ALA 182

Ligands

Unit 5	2UK 201 MG 202 CL 203
Unit 6	2UK 201 MG 202 CL 203
Unit 7	2UK 201 MG 202
Unit 8	2UK 201 MG 202 CL 203