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| Title | CRYSTAL STRUCTURE OF THE BACTERIAL RIBOSOMAL DECODING SITE I WITH 4'-DEOXY-4'-FLUORO NEOMYCIN ANALOG | |
| Keywords | RIBOSOME, AMINOGLYCOSIDE, RNA-ANTIBIOTIC COMPLEX | |
| Experiment | X-ray diffraction | |
| Number of Models | 1 |
| Database | ID code | Status | Coordinate files | ||
| Header | Asymmetric unit | Biological unit | |||
| PDB | 4PDQ | released | available | available | Quaternary Structure Server |
| Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
|---|---|---|---|---|---|---|
| 1 | RNA | A | 23 | 487 | 0 | |
| 2 | RNA | B | 23 | 487 | 0 | |
| 3 | Ligand | RNA (5'- *UP*UP*GP*CP*GP*UP*CP*AP*CP*GP*CP*CP*GP*GP*CP*GP*AP*AP*GP*U 3') | A | 1 | 0 | 1 |
| 4 | Ligand | RNA (5'- *UP*UP*GP*CP*GP*UP*CP*AP*CP*GP*CP*CP*GP*GP*CP*GP*AP*AP*GP*U 3') | B | 2 | 0 | 50 |
| 5 | Water | 1 | 0 | 1 | ||
| total | 50 | 974 | 52 |
| Unit 1 | U1 U2 G3 C4 G5 U6 C7 A8 C9 G10 C11 C12 G13 G14 C15 G16 A17 A18 G19 U20 C21 G22 C23 |
| Unit 2 | U24 U25 G26 C27 G28 U29 C30 A31 C32 G33 C34 C35 G36 G37 C38 G39 A40 A41 G42 U43 C44 G45 C46 |
| Unit 3 | MG101 |
| Unit 4 | NMZ101 MG102 |
Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.
| Perl script: | PDBscan.pl (15 Sep 2016) |
| Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |