4P87 - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF EST-Y29, A NOVEL PENICILLIN-BINDING PRO LACTAMASE HOMOLOG FROM A METAGENOMIC LIBRARY
• Keywords: HYDROLASE, PENICILLIN-BINDING PROTEIN, BETA-LACTAMASE, METAG
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	4P87	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	EST-Y29	A	390	3014	0
2	Protein	EST-Y29	B	387	2996	0
3	Ligand	EST-Y29	A	1	0	14
4	Ligand	EST-Y29	B	1	0	14
5	Water			816	0	816
total				1595	6010	844

Proteins

Unit 1

SER 0 MET 1 PRO 2 ASP 3 LEU 4 LEU 5 THR 6 ASN 7 VAL 8 ALA 9 GLU 10 ASN 11 TYR 12 VAL 13 ASN 14 GLN 15 ASP 16 LEU 17 PHE 18 ALA 19 GLY 20 ILE 21 GLU 22 TRP 23 ARG 24 ILE 25 ASP 26 GLN 27 ASP 28 GLY 29 LYS 30 PRO 31 ILE 32 PHE 33 GLN 34 GLY 35 CYS 36 ALA 37 GLY 38 VAL 39 LYS 40 ASP 41 ILE 42 GLU 43 THR 44 ARG 45 THR 46 PHE 47 ILE 48 PRO 49 LYS 50 ASN 51 ALA 52 ILE 53 TYR 54 ARG 55 ILE 56 TYR 57 SER 58 MET 59 THR 60 LYS 61 PRO 62 ILE 63 VAL 64 SER 65 PHE 66 LEU 67 ALA 68 MET 69 MET 70 LEU 71 ILE 72 GLU 73 ARG 74 GLY 75 VAL 76 PHE 77 ARG 78 LEU 79 SER 80 SER 81 PRO 82 ILE 83 GLN 84 ASN 85 PHE 86 ASP 87 PRO 88 ARG 89 PHE 90 LYS 91 SER 92 MET 93 LYS 94 VAL 95 ILE 96 ASP 97 GLN 98 HIS 99 ALA 100 HIS 101 ILE 102 GLU 103 PRO 104 ALA 105 THR 106 ALA 107 LEU 108 ILE 109 THR 110 ILE 111 GLU 112 HIS 113 LEU 114 LEU 115 THR 116 HIS 117 GLN 118 ALA 119 GLY 120 PHE 121 SER 122 TYR 123 ASP 124 PHE 125 SER 126 LEU 127 GLY 128 CYS 129 PRO 130 ILE 131 SER 132 ALA 133 HIS 134 TYR 135 ARG 136 ASP 137 ALA 138 GLN 139 LEU 140 ILE 141 GLU 142 ASP 143 GLY 144 GLY 145 ARG 146 ASP 147 LEU 148 THR 149 ASP 150 MET 151 MET 152 GLY 153 VAL 154 LEU 155 ALA 156 GLU 157 LEU 158 PRO 159 LEU 160 VAL 161 PHE 162 HIS 163 PRO 164 GLY 165 THR 166 GLN 167 TRP 168 LYS 169 TYR 170 SER 171 ILE 172 SER 173 THR 174 ASP 175 VAL 176 LEU 177 ALA 178 HIS 179 ILE 180 ILE 181 GLU 182 CYS 183 ALA 184 THR 185 GLY 186 GLU 187 ARG 188 VAL 189 ASP 190 ASP 191 LEU 192 LEU 193 GLN 194 ARG 195 LEU 196 ILE 197 PHE 198 ASP 199 PRO 200 LEU 201 ASP 202 MET 203 GLN 204 ASP 205 THR 206 GLY 207 PHE 208 SER 209 LEU 210 PRO 211 LEU 212 ASP 213 GLY 214 ALA 215 SER 216 ARG 217 LEU 218 MET 219 GLU 220 VAL 221 TYR 222 GLY 223 MET 224 ARG 225 SER 226 LEU 227 HIS 228 GLY 229 LEU 230 PRO 231 ALA 232 LEU 233 LYS 234 PRO 235 ALA 236 PRO 237 HIS 238 VAL 239 LEU 240 VAL 241 PRO 242 ALA 243 ASP 244 LEU 245 GLY 246 SER 247 SER 248 HIS 249 PRO 250 THR 251 ASP 252 ASP 253 PRO 254 ASP 255 PHE 256 ARG 257 ARG 258 GLY 259 GLY 260 HIS 261 GLY 262 LEU 263 TYR 264 SER 265 THR 266 LEU 267 ASP 268 ASP 269 TYR 270 MET 271 ALA 272 PHE 273 ALA 274 ASN 275 MET 276 LEU 277 LEU 278 SER 279 GLY 280 GLN 281 THR 282 PRO 283 GLU 284 GLY 285 GLU 286 THR 287 LEU 288 LEU 289 SER 290 PRO 291 ALA 292 VAL 293 LEU 294 LYS 295 LEU 296 ALA 297 LEU 298 ALA 299 PRO 300 ARG 301 VAL 302 HIS 303 PHE 304 GLY 305 ALA 306 ARG 307 GLY 308 MET 309 ARG 310 ILE 311 ASN 312 ASP 313 GLU 314 PRO 315 PHE 316 ALA 317 GLY 318 TYR 319 SER 320 TRP 321 ASN 322 LEU 323 LEU 324 GLY 325 ARG 326 VAL 327 MET 328 THR 329 ASP 330 VAL 331 GLY 332 ALA 333 ALA 334 ALA 335 TYR 336 ALA 337 THR 338 HIS 339 LEU 340 GLY 341 GLU 342 PHE 343 GLY 344 TRP 345 SER 346 GLY 347 ALA 348 ALA 349 ALA 350 THR 351 TYR 352 PHE 353 TRP 354 VAL 355 ASP 356 PRO 357 THR 358 LYS 359 ASN 360 MET 361 THR 362 GLY 363 CYS 364 VAL 365 MET 366 THR 367 GLN 368 PHE 369 LEU 370 GLY 371 SER 372 GLN 373 HIS 374 PRO 375 ILE 376 GLY 377 SER 378 ASP 379 MET 380 GLN 381 ALA 382 ALA 383 ALA 384 MET 385 SER 386 MET 387 LEU 388 GLY 389

Unit 2

PRO 2 ASP 3 LEU 4 LEU 5 THR 6 ASN 7 VAL 8 ALA 9 GLU 10 ASN 11 TYR 12 VAL 13 ASN 14 GLN 15 ASP 16 LEU 17 PHE 18 ALA 19 GLY 20 ILE 21 GLU 22 TRP 23 ARG 24 ILE 25 ASP 26 GLN 27 ASP 28 GLY 29 LYS 30 PRO 31 ILE 32 PHE 33 GLN 34 GLY 35 CYS 36 ALA 37 GLY 38 VAL 39 LYS 40 ASP 41 ILE 42 GLU 43 THR 44 ARG 45 THR 46 PHE 47 ILE 48 PRO 49 LYS 50 ASN 51 ALA 52 ILE 53 TYR 54 ARG 55 ILE 56 TYR 57 SER 58 MET 59 THR 60 LYS 61 PRO 62 ILE 63 VAL 64 SER 65 PHE 66 LEU 67 ALA 68 MET 69 MET 70 LEU 71 ILE 72 GLU 73 ARG 74 GLY 75 VAL 76 PHE 77 ARG 78 LEU 79 SER 80 SER 81 PRO 82 ILE 83 GLN 84 ASN 85 PHE 86 ASP 87 PRO 88 ARG 89 PHE 90 LYS 91 SER 92 MET 93 LYS 94 VAL 95 ILE 96 ASP 97 GLN 98 HIS 99 ALA 100 HIS 101 ILE 102 GLU 103 PRO 104 ALA 105 THR 106 ALA 107 LEU 108 ILE 109 THR 110 ILE 111 GLU 112 HIS 113 LEU 114 LEU 115 THR 116 HIS 117 GLN 118 ALA 119 GLY 120 PHE 121 SER 122 TYR 123 ASP 124 PHE 125 SER 126 LEU 127 GLY 128 CYS 129 PRO 130 ILE 131 SER 132 ALA 133 HIS 134 TYR 135 ARG 136 ASP 137 ALA 138 GLN 139 LEU 140 ILE 141 GLU 142 ASP 143 GLY 144 GLY 145 ARG 146 ASP 147 LEU 148 THR 149 ASP 150 MET 151 MET 152 GLY 153 VAL 154 LEU 155 ALA 156 GLU 157 LEU 158 PRO 159 LEU 160 VAL 161 PHE 162 HIS 163 PRO 164 GLY 165 THR 166 GLN 167 TRP 168 LYS 169 TYR 170 SER 171 ILE 172 SER 173 THR 174 ASP 175 VAL 176 LEU 177 ALA 178 HIS 179 ILE 180 ILE 181 GLU 182 CYS 183 ALA 184 THR 185 GLY 186 GLU 187 ARG 188 VAL 189 ASP 190 ASP 191 LEU 192 LEU 193 GLN 194 ARG 195 LEU 196 ILE 197 PHE 198 ASP 199 PRO 200 LEU 201 ASP 202 MET 203 GLN 204 ASP 205 THR 206 GLY 207 PHE 208 SER 209 LEU 210 PRO 211 LEU 212 ASP 213 GLY 214 ALA 215 SER 216 ARG 217 LEU 218 MET 219 GLU 220 VAL 221 TYR 222 GLY 223 MET 224 ARG 225 SER 226 LEU 227 HIS 228 GLY 229 LEU 230 PRO 231 ALA 232 LEU 233 LYS 234 PRO 235 ALA 236 PRO 237 HIS 238 VAL 239 LEU 240 VAL 241 PRO 242 ALA 243 ASP 244 LEU 245 GLY 246 SER 247 SER 248 HIS 249 PRO 250 THR 251 ASP 252 ASP 253 PRO 254 ASP 255 PHE 256 ARG 257 ARG 258 GLY 259 GLY 260 HIS 261 GLY 262 LEU 263 TYR 264 SER 265 THR 266 LEU 267 ASP 268 ASP 269 TYR 270 MET 271 ALA 272 PHE 273 ALA 274 ASN 275 MET 276 LEU 277 LEU 278 SER 279 GLY 280 GLN 281 THR 282 PRO 283 GLU 284 GLY 285 GLU 286 THR 287 LEU 288 LEU 289 SER 290 PRO 291 ALA 292 VAL 293 LEU 294 LYS 295 LEU 296 ALA 297 LEU 298 ALA 299 PRO 300 ARG 301 VAL 302 HIS 303 PHE 304 GLY 305 ALA 306 ARG 307 GLY 308 MET 309 ARG 310 ILE 311 ASN 312 ASP 313 GLU 314 PRO 315 PHE 316 ALA 317 GLY 318 TYR 319 SER 320 TRP 321 ASN 322 LEU 323 LEU 324 GLY 325 ARG 326 VAL 327 MET 328 THR 329 ASP 330 VAL 331 GLY 332 ALA 333 ALA 334 ALA 335 TYR 336 ALA 337 THR 338 HIS 339 LEU 340 GLY 341 GLU 342 PHE 343 GLY 344 TRP 345 SER 346 GLY 347 ALA 348 ALA 349 ALA 350 THR 351 TYR 352 PHE 353 TRP 354 VAL 355 ASP 356 PRO 357 THR 358 LYS 359 ASN 360 MET 361 THR 362 GLY 363 CYS 364 VAL 365 MET 366 THR 367 GLN 368 PHE 369 LEU 370 GLY 371 SER 372 GLN 373 HIS 374 PRO 375 ILE 376 GLY 377 SER 378 ASP 379 MET 380 GLN 381 ALA 382 ALA 383 ALA 384 MET 385 SER 386 MET 387 LEU 388

Ligands

Unit 3	4NP 401
Unit 4	4NP 401