4OYD - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF A COMPUTATIONALLY DESIGNED INHIBITOR OF EPSTEIN-BARR VIRAL BCL-2 PROTEIN
• Keywords: INHIBITOR, COMPLEX, APOPTOSIS, VIRAL PROTEIN-INHIBITOR COMPL
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	4OYD	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	APOPTOSIS REGULATOR BHRF1	A	156	1256	0
2	Protein	COMPUTATIONALLY DESIGNED INHIBITOR	B	117	972	0
3	Protein	APOPTOSIS REGULATOR BHRF1	C	158	1273	0
4	Protein	COMPUTATIONALLY DESIGNED INHIBITOR	D	117	972	0
5	Ligand	COMPUTATIONALLY DESIGNED INHIBITOR	D	1	0	4
6	Water			165	0	165
total				714	4473	169

Proteins

Unit 1	SER 1 ALA 2 TYR 3 SER 4 THR 5 ARG 6 GLU 7 ILE 8 LEU 9 LEU 10 ALA 11 LEU 12 CYS 13 ILE 14 ARG 15 ASP 16 SER 17 ARG 18 VAL 19 HIS 20 GLY 21 ASN 22 GLY 23 THR 24 LEU 25 HIS 26 PRO 27 VAL 28 LEU 29 GLU 30 LEU 31 ALA 32 ALA 33 ARG 34 GLU 35 THR 36 PRO 37 LEU 38 ARG 39 LEU 40 SER 41 PRO 42 GLU 43 ASP 44 THR 45 VAL 46 VAL 47 LEU 48 ARG 49 TYR 50 HIS 51 VAL 52 LEU 53 LEU 54 GLU 55 GLU 56 ILE 57 ILE 58 GLU 59 ARG 60 ASN 61 SER 62 GLU 63 THR 64 PHE 65 THR 66 GLU 67 THR 68 TRP 69 ASN 70 ARG 71 PHE 72 ILE 73 THR 74 HIS 75 THR 76 GLU 77 HIS 78 VAL 79 ASP 80 LEU 81 ASP 82 PHE 83 ASN 84 SER 85 VAL 86 PHE 87 LEU 88 GLU 89 ILE 90 PHE 91 HIS 92 ARG 93 GLY 94 ASP 95 PRO 96 SER 97 LEU 98 GLY 99 ARG 100 ALA 101 LEU 102 ALA 103 TRP 104 MET 105 ALA 106 TRP 107 CYS 108 MET 109 HIS 110 ALA 111 CYS 112 ARG 113 THR 114 LEU 115 CYS 116 CYS 117 ASN 118 GLN 119 SER 120 THR 121 PRO 122 TYR 123 TYR 124 VAL 125 VAL 126 ASP 127 LEU 128 SER 129 VAL 130 ARG 131 GLY 132 MET 133 LEU 134 GLU 135 ALA 136 SER 137 GLU 138 GLY 139 LEU 140 ASP 141 GLY 142 TRP 143 ILE 144 HIS 145 GLN 146 GLN 147 GLY 148 GLY 149 TRP 150 SER 151 THR 152 LEU 153 ILE 154 GLU 155 ASP 156
Unit 2	ALA 1 ASP 2 PRO 3 LYS 4 LYS 5 VAL 6 LEU 7 ASP 8 LYS 9 ALA 10 LYS 11 ASP 12 GLN 13 ALA 14 GLU 15 ASN 16 ARG 17 VAL 18 ARG 19 GLU 20 LEU 21 LYS 22 GLN 23 LYS 24 LEU 25 GLU 26 GLU 27 LEU 28 TYR 29 LYS 30 GLU 31 ALA 32 ARG 33 LYS 34 LEU 35 ASP 36 LEU 37 THR 38 GLN 39 GLU 40 MET 41 ARG 42 ARG 43 LYS 44 LEU 45 GLU 46 LEU 47 ARG 48 TYR 49 ILE 50 ALA 51 ALA 52 MET 53 LEU 54 MET 55 ALA 56 ILE 57 GLY 58 ASP 59 ILE 60 TYR 61 ASN 62 ALA 63 ILE 64 ARG 65 GLN 66 ALA 67 LYS 68 GLN 69 GLU 70 ALA 71 ASP 72 LYS 73 LEU 74 LYS 75 LYS 76 ALA 77 GLY 78 LEU 79 VAL 80 ASN 81 SER 82 GLN 83 GLN 84 LEU 85 ASP 86 GLU 87 LEU 88 LYS 89 ARG 90 ARG 91 LEU 92 GLU 93 GLU 94 LEU 95 LYS 96 GLU 97 GLU 98 ALA 99 SER 100 ARG 101 LYS 102 ALA 103 ARG 104 ASP 105 TYR 106 GLY 107 ARG 108 GLU 109 PHE 110 GLN 111 LEU 112 LYS 113 LEU 114 GLU 115 TYR 116 GLY 117
Unit 3	SER 1 ALA 2 TYR 3 SER 4 THR 5 ARG 6 GLU 7 ILE 8 LEU 9 LEU 10 ALA 11 LEU 12 CYS 13 ILE 14 ARG 15 ASP 16 SER 17 ARG 18 VAL 19 HIS 20 GLY 21 ASN 22 GLY 23 THR 24 LEU 25 HIS 26 PRO 27 VAL 28 LEU 29 GLU 30 LEU 31 ALA 32 ALA 33 ARG 34 GLU 35 THR 36 PRO 37 LEU 38 ARG 39 LEU 40 SER 41 PRO 42 GLU 43 ASP 44 THR 45 VAL 46 VAL 47 LEU 48 ARG 49 TYR 50 HIS 51 VAL 52 LEU 53 LEU 54 GLU 55 GLU 56 ILE 57 ILE 58 GLU 59 ARG 60 ASN 61 SER 62 GLU 63 THR 64 PHE 65 THR 66 GLU 67 THR 68 TRP 69 ASN 70 ARG 71 PHE 72 ILE 73 THR 74 HIS 75 THR 76 GLU 77 HIS 78 VAL 79 ASP 80 LEU 81 ASP 82 PHE 83 ASN 84 SER 85 VAL 86 PHE 87 LEU 88 GLU 89 ILE 90 PHE 91 HIS 92 ARG 93 GLY 94 ASP 95 PRO 96 SER 97 LEU 98 GLY 99 ARG 100 ALA 101 LEU 102 ALA 103 TRP 104 MET 105 ALA 106 TRP 107 CYS 108 MET 109 HIS 110 ALA 111 CYS 112 ARG 113 THR 114 LEU 115 CYS 116 CYS 117 ASN 118 GLN 119 SER 120 THR 121 PRO 122 TYR 123 TYR 124 VAL 125 VAL 126 ASP 127 LEU 128 SER 129 VAL 130 ARG 131 GLY 132 MET 133 LEU 134 GLU 135 ALA 136 SER 137 GLU 138 GLY 139 LEU 140 ASP 141 GLY 142 TRP 143 ILE 144 HIS 145 GLN 146 GLN 147 GLY 148 GLY 149 TRP 150 SER 151 THR 152 LEU 153 ILE 154 GLU 155 ASP 156 ASN 157 ILE 158
Unit 4	ALA 1 ASP 2 PRO 3 LYS 4 LYS 5 VAL 6 LEU 7 ASP 8 LYS 9 ALA 10 LYS 11 ASP 12 GLN 13 ALA 14 GLU 15 ASN 16 ARG 17 VAL 18 ARG 19 GLU 20 LEU 21 LYS 22 GLN 23 LYS 24 LEU 25 GLU 26 GLU 27 LEU 28 TYR 29 LYS 30 GLU 31 ALA 32 ARG 33 LYS 34 LEU 35 ASP 36 LEU 37 THR 38 GLN 39 GLU 40 MET 41 ARG 42 ARG 43 LYS 44 LEU 45 GLU 46 LEU 47 ARG 48 TYR 49 ILE 50 ALA 51 ALA 52 MET 53 LEU 54 MET 55 ALA 56 ILE 57 GLY 58 ASP 59 ILE 60 TYR 61 ASN 62 ALA 63 ILE 64 ARG 65 GLN 66 ALA 67 LYS 68 GLN 69 GLU 70 ALA 71 ASP 72 LYS 73 LEU 74 LYS 75 LYS 76 ALA 77 GLY 78 LEU 79 VAL 80 ASN 81 SER 82 GLN 83 GLN 84 LEU 85 ASP 86 GLU 87 LEU 88 LYS 89 ARG 90 ARG 91 LEU 92 GLU 93 GLU 94 LEU 95 LYS 96 GLU 97 GLU 98 ALA 99 SER 100 ARG 101 LYS 102 ALA 103 ARG 104 ASP 105 TYR 106 GLY 107 ARG 108 GLU 109 PHE 110 GLN 111 LEU 112 LYS 113 LEU 114 GLU 115 TYR 116 GLY 117

Ligands

Unit 5

EDO 201