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Sequence, Chains, Asymmetric and Biological Units

Title VOLTAGE-GATED SODIUM CHANNEL 1.5 (NAV1.5) C-TERMINAL DOMAIN WITH CALMODULIN POISED FOR ACTIVATION
Keywords SCN5A, VOLTAGE GATED SODIUM CHANNEL, CALMODULIN, METAL BINDI PROTEIN
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4OVN     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   CALMODULIN  A 145 2060 153
2  Protein   SODIUM CHANNEL PROTEIN TYPE 5 SUBUNIT ALPHA  F 146 2225 136
3  Protein   CALMODULIN  B 144 2044 153
4  Protein   SODIUM CHANNEL PROTEIN TYPE 5 SUBUNIT ALPHA  G 144 2195 136
5  Protein   CALMODULIN  C 145 2060 153
6  Protein   SODIUM CHANNEL PROTEIN TYPE 5 SUBUNIT ALPHA  H 151 2295 136
7  Protein   CALMODULIN  D 145 2060 153
8  Protein   SODIUM CHANNEL PROTEIN TYPE 5 SUBUNIT ALPHA  I 143 2181 136
9  Protein   CALMODULIN  E 144 2044 153
10  Protein   SODIUM CHANNEL PROTEIN TYPE 5 SUBUNIT ALPHA  J 151 2287 136
11  Ligand   CALMODULIN  A 5 0 9
12  Ligand   SODIUM CHANNEL PROTEIN TYPE 5 SUBUNIT ALPHA  F 1 0 5
13  Ligand   CALMODULIN  B 4 0 8
14  Ligand   SODIUM CHANNEL PROTEIN TYPE 5 SUBUNIT ALPHA  G 1 0 5
15  Ligand   CALMODULIN  C 6 0 10
16  Ligand   SODIUM CHANNEL PROTEIN TYPE 5 SUBUNIT ALPHA  H 1 0 5
17  Ligand   CALMODULIN  D 4 0 4
18  Ligand   CALMODULIN  E 2 0 2
19  Ligand   SODIUM CHANNEL PROTEIN TYPE 5 SUBUNIT ALPHA  J 1 0 5
20 Water     62 0 62
total       1545 21451 1560

Proteins
Unit 1 GLN4 LEU5 THR6 GLU7 GLU8 GLN9 ILE10 ALA11 GLU12 PHE13 LYS14 GLU15 ALA16 PHE17 SER18 LEU19 PHE20 ASP21 LYS22 ASP23 GLY24 ASP25 GLY26 THR27 ILE28 THR29 THR30 LYS31 GLU32 LEU33 GLY34 THR35 VAL36 MSE37 ARG38 SER39 LEU40 GLY41 GLN42 ASN43 PRO44 THR45 GLU46 ALA47 GLU48 LEU49 GLN50 ASP51 MSE52 ILE53 ASN54 GLU55 VAL56 ASP57 ALA58 ASP59 GLY60 ASN61 GLY62 THR63 ILE64 ASP65 PHE66 PRO67 GLU68 PHE69 LEU70 THR71 MSE72 MSE73 ALA74 ARG75 LYS76 MSE77 LYS78 ASP79 THR80 ASP81 SER82 GLU83 GLU84 GLU85 ILE86 ARG87 GLU88 ALA89 PHE90 ARG91 VAL92 PHE93 ASP94 LYS95 ASP96 GLY97 ASN98 GLY99 TYR100 ILE101 SER102 ALA103 ALA104 GLU105 LEU106 ARG107 HIS108 VAL109 MSE110 THR111 ASN112 LEU113 GLY114 GLU115 LYS116 LEU117 THR118 ASP119 GLU120 GLU121 VAL122 ASP123 GLU124 MSE125 ILE126 ARG127 GLU128 ALA129 ASP130 ILE131 ASP132 GLY133 ASP134 GLY135 GLN136 VAL137 ASN138 TYR139 GLU140 GLU141 PHE142 VAL143 GLN144 MSE145 MSE146 THR147 ALA148
Unit 2 SER1782 THR1783 GLU1784 PRO1785 LEU1786 SER1787 GLU1788 ASP1789 ASP1790 PHE1791 ASP1792 MSE1793 PHE1794 TYR1795 GLU1796 ILE1797 TRP1798 GLU1799 LYS1800 PHE1801 ASP1802 PRO1803 GLU1804 ALA1805 THR1806 GLN1807 PHE1808 ILE1809 GLU1810 TYR1811 SER1812 VAL1813 LEU1814 SER1815 ASP1816 PHE1817 ALA1818 ASP1819 ALA1820 LEU1821 SER1822 GLU1823 PRO1824 LEU1825 ARG1826 ILE1827 ALA1828 LYS1829 PRO1830 ASN1831 GLN1832 ILE1833 SER1834 LEU1835 ILE1836 ASN1837 MSE1838 ASP1839 LEU1840 PRO1841 MSE1842 VAL1843 SER1844 GLY1845 ASP1846 ARG1847 ILE1848 HIS1849 CYS1850 MSE1851 ASP1852 ILE1853 LEU1854 PHE1855 ALA1856 PHE1857 THR1858 LYS1859 ARG1860 VAL1861 LEU1862 GLY1863 GLU1864 SER1865 GLY1866 GLU1867 MSE1868 ASP1869 ALA1870 LEU1871 LYS1872 ILE1873 GLN1874 MSE1875 GLU1876 GLU1877 LYS1878 PHE1879 MSE1880 ALA1881 ALA1882 ASN1883 PRO1884 SER1885 LYS1886 ILE1887 SER1888 TYR1889 GLU1890 PRO1891 ILE1892 THR1893 THR1894 THR1895 LEU1896 ARG1897 ARG1898 LYS1899 HIS1900 GLU1901 GLU1902 VAL1903 SER1904 ALA1905 MSE1906 VAL1907 ILE1908 GLN1909 ARG1910 ALA1911 PHE1912 ARG1913 ARG1914 HIS1915 LEU1916 LEU1917 GLN1918 ARG1919 SER1920 LEU1921 LYS1922 HIS1923 ALA1924 SER1925 PHE1926 LEU1927
Unit 3 LEU5 THR6 GLU7 GLU8 GLN9 ILE10 ALA11 GLU12 PHE13 LYS14 GLU15 ALA16 PHE17 SER18 LEU19 PHE20 ASP21 LYS22 ASP23 GLY24 ASP25 GLY26 THR27 ILE28 THR29 THR30 LYS31 GLU32 LEU33 GLY34 THR35 VAL36 MSE37 ARG38 SER39 LEU40 GLY41 GLN42 ASN43 PRO44 THR45 GLU46 ALA47 GLU48 LEU49 GLN50 ASP51 MSE52 ILE53 ASN54 GLU55 VAL56 ASP57 ALA58 ASP59 GLY60 ASN61 GLY62 THR63 ILE64 ASP65 PHE66 PRO67 GLU68 PHE69 LEU70 THR71 MSE72 MSE73 ALA74 ARG75 LYS76 MSE77 LYS78 ASP79 THR80 ASP81 SER82 GLU83 GLU84 GLU85 ILE86 ARG87 GLU88 ALA89 PHE90 ARG91 VAL92 PHE93 ASP94 LYS95 ASP96 GLY97 ASN98 GLY99 TYR100 ILE101 SER102 ALA103 ALA104 GLU105 LEU106 ARG107 HIS108 VAL109 MSE110 THR111 ASN112 LEU113 GLY114 GLU115 LYS116 LEU117 THR118 ASP119 GLU120 GLU121 VAL122 ASP123 GLU124 MSE125 ILE126 ARG127 GLU128 ALA129 ASP130 ILE131 ASP132 GLY133 ASP134 GLY135 GLN136 VAL137 ASN138 TYR139 GLU140 GLU141 PHE142 VAL143 GLN144 MSE145 MSE146 THR147 ALA148
Unit 4 THR1783 GLU1784 PRO1785 LEU1786 SER1787 GLU1788 ASP1789 ASP1790 PHE1791 ASP1792 MSE1793 PHE1794 TYR1795 GLU1796 ILE1797 TRP1798 GLU1799 LYS1800 PHE1801 ASP1802 PRO1803 GLU1804 ALA1805 THR1806 GLN1807 PHE1808 ILE1809 GLU1810 TYR1811 SER1812 VAL1813 LEU1814 SER1815 ASP1816 PHE1817 ALA1818 ASP1819 ALA1820 LEU1821 SER1822 GLU1823 PRO1824 LEU1825 ARG1826 ILE1827 ALA1828 LYS1829 PRO1830 ASN1831 GLN1832 ILE1833 SER1834 LEU1835 ILE1836 ASN1837 MSE1838 ASP1839 LEU1840 PRO1841 MSE1842 VAL1843 SER1844 GLY1845 ASP1846 ARG1847 ILE1848 HIS1849 CYS1850 MSE1851 ASP1852 ILE1853 LEU1854 PHE1855 ALA1856 PHE1857 THR1858 LYS1859 ARG1860 VAL1861 LEU1862 GLY1863 GLU1864 SER1865 GLY1866 GLU1867 MSE1868 ASP1869 ALA1870 LEU1871 LYS1872 ILE1873 GLN1874 MSE1875 GLU1876 GLU1877 LYS1878 PHE1879 MSE1880 ALA1881 ALA1882 ASN1883 PRO1884 SER1885 LYS1886 ILE1887 SER1888 TYR1889 GLU1890 PRO1891 ILE1892 THR1893 THR1894 THR1895 LEU1896 ARG1897 ARG1898 LYS1899 HIS1900 GLU1901 GLU1902 VAL1903 SER1904 ALA1905 MSE1906 VAL1907 ILE1908 GLN1909 ARG1910 ALA1911 PHE1912 ARG1913 ARG1914 HIS1915 LEU1916 LEU1917 GLN1918 ARG1919 SER1920 LEU1921 LYS1922 HIS1923 ALA1924 SER1925 PHE1926
Unit 5 GLN4 LEU5 THR6 GLU7 GLU8 GLN9 ILE10 ALA11 GLU12 PHE13 LYS14 GLU15 ALA16 PHE17 SER18 LEU19 PHE20 ASP21 LYS22 ASP23 GLY24 ASP25 GLY26 THR27 ILE28 THR29 THR30 LYS31 GLU32 LEU33 GLY34 THR35 VAL36 MSE37 ARG38 SER39 LEU40 GLY41 GLN42 ASN43 PRO44 THR45 GLU46 ALA47 GLU48 LEU49 GLN50 ASP51 MSE52 ILE53 ASN54 GLU55 VAL56 ASP57 ALA58 ASP59 GLY60 ASN61 GLY62 THR63 ILE64 ASP65 PHE66 PRO67 GLU68 PHE69 LEU70 THR71 MSE72 MSE73 ALA74 ARG75 LYS76 MSE77 LYS78 ASP79 THR80 ASP81 SER82 GLU83 GLU84 GLU85 ILE86 ARG87 GLU88 ALA89 PHE90 ARG91 VAL92 PHE93 ASP94 LYS95 ASP96 GLY97 ASN98 GLY99 TYR100 ILE101 SER102 ALA103 ALA104 GLU105 LEU106 ARG107 HIS108 VAL109 MSE110 THR111 ASN112 LEU113 GLY114 GLU115 LYS116 LEU117 THR118 ASP119 GLU120 GLU121 VAL122 ASP123 GLU124 MSE125 ILE126 ARG127 GLU128 ALA129 ASP130 ILE131 ASP132 GLY133 ASP134 GLY135 GLN136 VAL137 ASN138 TYR139 GLU140 GLU141 PHE142 VAL143 GLN144 MSE145 MSE146 THR147 ALA148
Unit 6 VAL1777 ALA1778 THR1779 GLU1780 GLU1781 SER1782 THR1783 GLU1784 PRO1785 LEU1786 SER1787 GLU1788 ASP1789 ASP1790 PHE1791 ASP1792 MSE1793 PHE1794 TYR1795 GLU1796 ILE1797 TRP1798 GLU1799 LYS1800 PHE1801 ASP1802 PRO1803 GLU1804 ALA1805 THR1806 GLN1807 PHE1808 ILE1809 GLU1810 TYR1811 SER1812 VAL1813 LEU1814 SER1815 ASP1816 PHE1817 ALA1818 ASP1819 ALA1820 LEU1821 SER1822 GLU1823 PRO1824 LEU1825 ARG1826 ILE1827 ALA1828 LYS1829 PRO1830 ASN1831 GLN1832 ILE1833 SER1834 LEU1835 ILE1836 ASN1837 MSE1838 ASP1839 LEU1840 PRO1841 MSE1842 VAL1843 SER1844 GLY1845 ASP1846 ARG1847 ILE1848 HIS1849 CYS1850 MSE1851 ASP1852 ILE1853 LEU1854 PHE1855 ALA1856 PHE1857 THR1858 LYS1859 ARG1860 VAL1861 LEU1862 GLY1863 GLU1864 SER1865 GLY1866 GLU1867 MSE1868 ASP1869 ALA1870 LEU1871 LYS1872 ILE1873 GLN1874 MSE1875 GLU1876 GLU1877 LYS1878 PHE1879 MSE1880 ALA1881 ALA1882 ASN1883 PRO1884 SER1885 LYS1886 ILE1887 SER1888 TYR1889 GLU1890 PRO1891 ILE1892 THR1893 THR1894 THR1895 LEU1896 ARG1897 ARG1898 LYS1899 HIS1900 GLU1901 GLU1902 VAL1903 SER1904 ALA1905 MSE1906 VAL1907 ILE1908 GLN1909 ARG1910 ALA1911 PHE1912 ARG1913 ARG1914 HIS1915 LEU1916 LEU1917 GLN1918 ARG1919 SER1920 LEU1921 LYS1922 HIS1923 ALA1924 SER1925 PHE1926 LEU1927
Unit 7 GLN4 LEU5 THR6 GLU7 GLU8 GLN9 ILE10 ALA11 GLU12 PHE13 LYS14 GLU15 ALA16 PHE17 SER18 LEU19 PHE20 ASP21 LYS22 ASP23 GLY24 ASP25 GLY26 THR27 ILE28 THR29 THR30 LYS31 GLU32 LEU33 GLY34 THR35 VAL36 MSE37 ARG38 SER39 LEU40 GLY41 GLN42 ASN43 PRO44 THR45 GLU46 ALA47 GLU48 LEU49 GLN50 ASP51 MSE52 ILE53 ASN54 GLU55 VAL56 ASP57 ALA58 ASP59 GLY60 ASN61 GLY62 THR63 ILE64 ASP65 PHE66 PRO67 GLU68 PHE69 LEU70 THR71 MSE72 MSE73 ALA74 ARG75 LYS76 MSE77 LYS78 ASP79 THR80 ASP81 SER82 GLU83 GLU84 GLU85 ILE86 ARG87 GLU88 ALA89 PHE90 ARG91 VAL92 PHE93 ASP94 LYS95 ASP96 GLY97 ASN98 GLY99 TYR100 ILE101 SER102 ALA103 ALA104 GLU105 LEU106 ARG107 HIS108 VAL109 MSE110 THR111 ASN112 LEU113 GLY114 GLU115 LYS116 LEU117 THR118 ASP119 GLU120 GLU121 VAL122 ASP123 GLU124 MSE125 ILE126 ARG127 GLU128 ALA129 ASP130 ILE131 ASP132 GLY133 ASP134 GLY135 GLN136 VAL137 ASN138 TYR139 GLU140 GLU141 PHE142 VAL143 GLN144 MSE145 MSE146 THR147 ALA148
Unit 8 GLU1784 PRO1785 LEU1786 SER1787 GLU1788 ASP1789 ASP1790 PHE1791 ASP1792 MSE1793 PHE1794 TYR1795 GLU1796 ILE1797 TRP1798 GLU1799 LYS1800 PHE1801 ASP1802 PRO1803 GLU1804 ALA1805 THR1806 GLN1807 PHE1808 ILE1809 GLU1810 TYR1811 SER1812 VAL1813 LEU1814 SER1815 ASP1816 PHE1817 ALA1818 ASP1819 ALA1820 LEU1821 SER1822 GLU1823 PRO1824 LEU1825 ARG1826 ILE1827 ALA1828 LYS1829 PRO1830 ASN1831 GLN1832 ILE1833 SER1834 LEU1835 ILE1836 ASN1837 MSE1838 ASP1839 LEU1840 PRO1841 MSE1842 VAL1843 SER1844 GLY1845 ASP1846 ARG1847 ILE1848 HIS1849 CYS1850 MSE1851 ASP1852 ILE1853 LEU1854 PHE1855 ALA1856 PHE1857 THR1858 LYS1859 ARG1860 VAL1861 LEU1862 GLY1863 GLU1864 SER1865 GLY1866 GLU1867 MSE1868 ASP1869 ALA1870 LEU1871 LYS1872 ILE1873 GLN1874 MSE1875 GLU1876 GLU1877 LYS1878 PHE1879 MSE1880 ALA1881 ALA1882 ASN1883 PRO1884 SER1885 LYS1886 ILE1887 SER1888 TYR1889 GLU1890 PRO1891 ILE1892 THR1893 THR1894 THR1895 LEU1896 ARG1897 ARG1898 LYS1899 HIS1900 GLU1901 GLU1902 VAL1903 SER1904 ALA1905 MSE1906 VAL1907 ILE1908 GLN1909 ARG1910 ALA1911 PHE1912 ARG1913 ARG1914 HIS1915 LEU1916 LEU1917 GLN1918 ARG1919 SER1920 LEU1921 LYS1922 HIS1923 ALA1924 SER1925 PHE1926
Unit 9 LEU5 THR6 GLU7 GLU8 GLN9 ILE10 ALA11 GLU12 PHE13 LYS14 GLU15 ALA16 PHE17 SER18 LEU19 PHE20 ASP21 LYS22 ASP23 GLY24 ASP25 GLY26 THR27 ILE28 THR29 THR30 LYS31 GLU32 LEU33 GLY34 THR35 VAL36 MSE37 ARG38 SER39 LEU40 GLY41 GLN42 ASN43 PRO44 THR45 GLU46 ALA47 GLU48 LEU49 GLN50 ASP51 MSE52 ILE53 ASN54 GLU55 VAL56 ASP57 ALA58 ASP59 GLY60 ASN61 GLY62 THR63 ILE64 ASP65 PHE66 PRO67 GLU68 PHE69 LEU70 THR71 MSE72 MSE73 ALA74 ARG75 LYS76 MSE77 LYS78 ASP79 THR80 ASP81 SER82 GLU83 GLU84 GLU85 ILE86 ARG87 GLU88 ALA89 PHE90 ARG91 VAL92 PHE93 ASP94 LYS95 ASP96 GLY97 ASN98 GLY99 TYR100 ILE101 SER102 ALA103 ALA104 GLU105 LEU106 ARG107 HIS108 VAL109 MSE110 THR111 ASN112 LEU113 GLY114 GLU115 LYS116 LEU117 THR118 ASP119 GLU120 GLU121 VAL122 ASP123 GLU124 MSE125 ILE126 ARG127 GLU128 ALA129 ASP130 ILE131 ASP132 GLY133 ASP134 GLY135 GLN136 VAL137 ASN138 TYR139 GLU140 GLU141 PHE142 VAL143 GLN144 MSE145 MSE146 THR147 ALA148
Unit 10 SER1776 VAL1777 ALA1778 THR1779 GLU1780 GLU1781 SER1782 THR1783 GLU1784 PRO1785 LEU1786 SER1787 GLU1788 ASP1789 ASP1790 PHE1791 ASP1792 MSE1793 PHE1794 TYR1795 GLU1796 ILE1797 TRP1798 GLU1799 LYS1800 PHE1801 ASP1802 PRO1803 GLU1804 ALA1805 THR1806 GLN1807 PHE1808 ILE1809 GLU1810 TYR1811 SER1812 VAL1813 LEU1814 SER1815 ASP1816 PHE1817 ALA1818 ASP1819 ALA1820 LEU1821 SER1822 GLU1823 PRO1824 LEU1825 ARG1826 ILE1827 ALA1828 LYS1829 PRO1830 ASN1831 GLN1832 ILE1833 SER1834 LEU1835 ILE1836 ASN1837 MSE1838 ASP1839 LEU1840 PRO1841 MSE1842 VAL1843 SER1844 GLY1845 ASP1846 ARG1847 ILE1848 HIS1849 CYS1850 MSE1851 ASP1852 ILE1853 LEU1854 PHE1855 ALA1856 PHE1857 THR1858 LYS1859 ARG1860 VAL1861 LEU1862 GLY1863 GLU1864 SER1865 GLY1866 GLU1867 MSE1868 ASP1869 ALA1870 LEU1871 LYS1872 ILE1873 GLN1874 MSE1875 GLU1876 GLU1877 LYS1878 PHE1879 MSE1880 ALA1881 ALA1882 ASN1883 PRO1884 SER1885 LYS1886 ILE1887 SER1888 TYR1889 GLU1890 PRO1891 ILE1892 THR1893 THR1894 THR1895 LEU1896 ARG1897 ARG1898 LYS1899 HIS1900 GLU1901 GLU1902 VAL1903 SER1904 ALA1905 MSE1906 VAL1907 ILE1908 GLN1909 ARG1910 ALA1911 PHE1912 ARG1913 ARG1914 HIS1915 LEU1916 LEU1917 GLN1918 ARG1919 SER1920 LEU1921 LYS1922 HIS1923 ALA1924 SER1925 PHE1926

Ligands
Unit 11 MG201 MG202 MG203 MG204 SO4205
Unit 12 SO42101
Unit 13 MG201 MG202 MG203 PO4204
Unit 14 SO42101
Unit 15 MG201 MG202 MG203 MG204 PO4205 MG206
Unit 16 SO42101
Unit 17 MG201 MG202 MG203 MG204
Unit 18 MG201 MG202
Unit 19 SO42101

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany