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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE OF AN RRP6-RNA EXOSOME COMPLEX BOUND TO POLY(A) RN
Keywords RNA EXOSOME COMPLEX, RNA PROCESSING/DECAY, NUCLEUS, RNA BIND PROTEIN-RNA COMPLEX, HYDROLASE-RNA COMPLEX
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   4OO1     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   EXOSOME COMPLEX COMPONENT RRP45  A 293 2282 0
2  Protein   EXOSOME COMPLEX COMPONENT SKI6  B 239 1879 0
3  Protein   EXOSOME COMPLEX COMPONENT RRP43  C 312 2425 0
4  Protein   EXOSOME COMPLEX COMPONENT RRP46  D 221 1689 0
5  Protein   EXOSOME COMPLEX COMPONENT RRP42  E 255 1964 0
6  Protein   EXOSOME COMPLEX COMPONENT MTR3  F 207 1600 0
7  Protein   EXOSOME COMPLEX COMPONENT RRP40  G 226 1763 0
8  Protein   EXOSOME COMPLEX COMPONENT RRP4  H 279 2159 0
9  Protein   EXOSOME COMPLEX COMPONENT CSL4  I 216 1650 0
10  Protein   EXOSOME COMPLEX EXONUCLEASE RRP6  J 493 4034 0
11  RNA    S 6 119 0
12  Ligand   EXOSOME COMPLEX COMPONENT RRP42  E 2 0 9
13  Ligand   EXOSOME COMPLEX COMPONENT RRP40  G 1 0 6
14  Ligand   EXOSOME COMPLEX COMPONENT CSL4  I 1 0 5
15  Ligand   POLY A RNA  S 2 0 6
total       2753 21564 26
Proteins
Unit 1 LYS3 ASP4 ILE5 GLU6 ILE7 SER8 ALA9 SER10 GLU11 SER12 LYS13 PHE14 ILE15 LEU16 GLU17 ALA18 LEU19 ARG20 GLN21 ASN22 TYR23 ARG24 LEU25 ASP26 GLY27 ARG28 SER29 PHE30 ASP31 GLN32 PHE33 ARG34 ASP35 VAL36 GLU37 ILE38 THR39 PHE40 GLY41 LYS42 GLU43 PHE44 GLY45 ASP46 VAL47 SER48 VAL49 LYS50 MET51 GLY52 ASN53 THR54 LYS55 VAL56 HIS57 CYS58 ARG59 ILE60 SER61 CYS62 GLN63 ILE64 ALA65 GLN66 PRO67 TYR68 GLU69 ASP70 ARG71 PRO72 PHE73 GLU74 GLY75 LEU76 PHE77 VAL78 ILE79 SER80 THR81 GLU82 ILE83 SER84 PRO85 MET86 ALA87 GLY88 SER89 GLN90 PHE91 GLU92 ASN93 GLY94 ASN95 ILE96 THR97 GLY98 GLU99 ASP100 GLU101 VAL102 LEU103 CYS104 SER105 ARG106 ILE107 ILE108 GLU109 LYS110 SER111 VAL112 ARG113 ARG114 SER115 GLY116 ALA117 LEU118 ASP119 VAL120 GLU121 GLY122 LEU123 CYS124 ILE125 VAL126 ALA127 GLY128 SER129 LYS130 CYS131 TRP132 ALA133 VAL134 ARG135 ALA136 ASP137 VAL138 HIS139 PHE140 LEU141 ASP142 CYS143 ASP144 GLY145 GLY146 PHE147 ILE148 ASP149 ALA150 SER151 CYS152 ILE153 ALA154 VAL155 MET156 ALA157 GLY158 LEU159 MET160 HIS161 PHE162 LYS163 LYS164 PRO165 ASP166 ILE167 THR168 VAL169 HIS170 GLY171 GLU172 GLN173 ILE174 ILE175 VAL176 HIS177 PRO178 VAL179 ASN180 GLU181 ARG182 GLU183 PRO184 VAL185 PRO186 LEU187 GLY188 ILE189 LEU190 HIS191 ILE192 PRO193 ILE194 CYS195 VAL196 THR197 PHE198 SER199 PHE200 PHE201 ASN202 PRO203 GLN204 ASP205 THR206 GLU213 THR214 ASN215 SER216 GLU217 ILE218 SER219 ILE220 ILE221 ASP222 ALA223 THR224 LEU225 LYS226 GLU227 GLU228 LEU229 LEU230 ARG231 ASP232 GLY233 VAL234 LEU235 THR236 VAL237 THR238 LEU239 ASN240 LYS241 ASN242 ARG243 GLU244 VAL245 VAL246 GLN247 VAL248 SER249 LYS250 ALA251 GLY252 GLY253 LEU254 PRO255 MET256 ASP257 ALA258 LEU259 THR260 LEU261 MET262 LYS263 CYS264 CYS265 HIS266 GLU267 ALA268 TYR269 SER270 ILE271 ILE272 GLU273 LYS274 ILE275 THR276 ASP277 GLN278 ILE279 LEU280 GLN281 LEU282 LEU283 LYS284 GLU285 ASP286 SER287 GLU288 LYS289 ARG290 ASN291 LYS292 TYR293 ALA294 ALA295 MET296 LEU297 THR298 SER299 GLU300 ASN301
Unit 2 LEU4 GLU5 ILE6 TYR7 SER8 PRO9 GLU10 GLY11 LEU12 ARG13 LEU14 ASP15 GLY16 ARG17 ARG18 TRP19 ASN20 GLU21 LEU22 ARG23 ARG24 PHE25 GLU26 SER27 SER28 ILE29 ASN30 THR31 HIS32 PRO33 HIS34 ALA35 ALA36 ASP37 GLY38 SER39 SER40 TYR41 MET42 GLU43 GLN44 GLY45 ASN46 ASN47 LYS48 ILE49 ILE50 THR51 LEU52 VAL53 LYS54 GLY55 PRO56 LYS57 GLU58 PRO59 ARG60 LEU61 LYS62 SER63 GLN64 MET65 ASP66 THR67 SER68 LYS69 ALA70 LEU71 LEU72 ASN73 VAL74 SER75 VAL76 ASN77 ILE78 THR79 LYS80 PHE81 SER82 LYS83 PHE84 GLU85 ARG86 SER87 LYS88 SER89 SER90 HIS91 LYS92 ASN93 GLU94 ARG95 ARG96 VAL97 LEU98 GLU99 ILE100 GLN101 THR102 SER103 LEU104 VAL105 ARG106 MET107 PHE108 GLU109 LYS110 ASN111 VAL112 MET113 LEU114 ASN115 ILE116 TYR117 PRO118 ARG119 THR120 VAL121 ILE122 ASP123 ILE124 GLU125 ILE126 HIS127 VAL128 LEU129 GLU130 GLN131 ASP132 GLY133 GLY134 ILE135 MET136 GLY137 SER138 LEU139 ILE140 ASN141 GLY142 ILE143 THR144 LEU145 ALA146 LEU147 ILE148 ASP149 ALA150 GLY151 ILE152 SER153 MET154 PHE155 ASP156 TYR157 ILE158 SER159 GLY160 ILE161 SER162 VAL163 GLY164 LEU165 TYR166 ASP167 THR168 THR169 PRO170 LEU171 LEU172 ASP173 THR174 ASN175 SER176 LEU177 GLU178 GLU179 ASN180 ALA181 MET182 SER183 THR184 VAL185 THR186 LEU187 GLY188 VAL189 VAL190 GLY191 LYS192 SER193 GLU194 LYS195 LEU196 SER197 LEU198 LEU199 LEU200 VAL201 GLU202 ASP203 LYS204 ILE205 PRO206 LEU207 ASP208 ARG209 LEU210 GLU211 ASN212 VAL213 LEU214 ALA215 ILE216 GLY217 ILE218 ALA219 GLY220 ALA221 HIS222 ARG223 VAL224 ARG225 ASP226 LEU227 MET228 ASP229 GLU230 GLU231 LEU232 ARG233 LYS234 HIS235 ALA236 GLN237 LYS238 ARG239 VAL240 SER241 ASN242
Unit 3 THR6 LEU7 GLU8 THR9 ILE10 GLU11 ILE12 HIS13 PRO14 ILE15 THR16 PHE17 PRO18 PRO19 GLU20 VAL21 LEU22 ALA23 ARG24 ILE25 SER26 PRO27 GLU28 LEU29 SER30 LEU31 GLN32 ARG33 HIS34 LEU35 SER36 LEU37 GLY38 ILE39 ARG40 PRO41 CYS42 LEU43 ARG44 LYS45 TYR46 GLU47 GLU48 PHE49 ARG50 ASP51 VAL52 ALA53 ILE54 GLU55 ASN56 ASN57 THR58 LEU59 SER60 ARG61 TYR62 ALA63 ASP64 ALA65 GLY66 ASN67 ILE68 ASP69 THR70 LYS71 ASN72 ASN73 ILE74 LEU75 GLY76 SER77 ASN78 VAL79 LEU80 LYS81 SER82 GLY83 LYS84 THR85 ILE86 VAL87 ILE88 THR89 SER90 ILE91 THR92 GLY93 GLY94 ILE95 ILE96 GLU97 GLU98 THR99 SER100 ALA101 GLU121 ASP122 ILE123 ILE124 ALA125 ASN126 TYR127 ALA128 SER129 VAL130 TYR131 PRO132 VAL133 VAL134 GLU135 VAL136 GLU137 ARG138 GLY139 ARG140 VAL141 GLY142 ALA143 CYS144 THR145 ASP146 GLU147 GLU148 MET149 THR150 ILE151 SER152 GLN153 LYS154 LEU155 HIS156 ASP157 SER158 ILE159 LEU160 HIS161 SER162 ARG163 ILE164 LEU165 PRO166 LYS167 LYS168 ALA169 LEU170 LYS171 VAL172 LYS173 ALA174 GLY175 VAL176 ARG177 SER178 ALA179 ASN180 THR184 PHE185 SER186 VAL187 LEU188 TYR189 PRO190 ASP191 TRP209 SER210 TYR211 VAL212 LEU213 TYR214 ALA215 LYS216 ILE217 VAL218 VAL219 LEU220 SER221 ARG222 THR223 GLY224 PRO225 VAL226 PHE227 ASP228 LEU229 CYS230 TRP231 ASN232 SER233 LEU234 MET235 TYR236 ALA237 LEU238 GLN239 SER240 VAL241 LYS242 LEU243 PRO244 ARG245 ALA246 PHE247 ILE248 ASP249 THR271 TYR272 GLU273 ILE274 ILE275 CYS276 ASP277 GLN278 THR279 LYS280 SER281 VAL282 PRO283 LEU284 MET285 ILE286 ASN287 ALA288 LYS289 ASN290 ILE291 ALA292 PHE293 ALA294 SER295 ASN296 TYR297 GLY298 ILE299 VAL300 GLU301 LEU302 ASP303 PRO304 GLU305 CYS306 GLN307 LEU308 GLN309 ASN327 THR328 VAL329 LEU330 ILE331 ALA332 ASP333 LEU334 ASP335 THR336 GLU337 ALA338 GLU339 GLU340 THR341 SER342 ILE343 HIS344 SER345 THR346 ILE347 SER348 ILE349 LEU350 ALA351 ALA352 PRO353 SER354 GLY355 ASN356 TYR357 LYS358 GLN359 LEU360 THR361 LEU362 VAL363 GLY364 GLY365 GLY366 ALA367 LYS368 ILE369 THR370 PRO371 GLU372 MET373 ILE374 LYS375 ARG376 SER377 LEU378 LEU379 LEU380 SER381 ARG382 VAL383 ARG384 ALA385 ASP386 ASP387 LEU388 SER389 THR390 ARG391 PHE392 ASN393 ILE394
Unit 4 MET1 SER2 VAL3 GLN4 ALA5 GLU6 ILE7 GLY8 ILE9 LEU10 ASP11 HIS12 VAL13 ASP14 GLY15 SER16 SER17 GLU18 PHE19 VAL20 SER21 GLN22 ASP23 THR24 LYS25 VAL26 ILE27 CYS28 SER29 VAL30 THR31 GLY32 PRO33 ILE34 GLU35 PRO36 LYS37 ALA38 ARG39 GLN40 GLU41 LEU42 PRO43 THR44 GLN45 LEU46 ALA47 LEU48 GLU49 ILE50 ILE51 VAL52 ARG53 PRO54 ALA55 LYS56 GLY57 VAL58 ALA59 THR60 THR61 ARG62 GLU63 LYS64 VAL65 LEU66 GLU67 ASP68 LYS69 LEU70 ARG71 ALA72 VAL73 LEU74 THR75 PRO76 LEU77 ILE78 THR79 ARG80 HIS81 CYS82 TYR83 PRO84 ARG85 GLN86 LEU87 CYS88 GLN89 ILE90 THR91 CYS92 GLN93 ILE94 LEU95 GLU96 SER97 GLY98 GLU99 ASP100 GLU101 ALA102 GLU103 PHE104 SER105 LEU106 ARG107 GLU108 LEU109 SER110 CYS111 CYS112 ILE113 ASN114 ALA115 ALA116 PHE117 LEU118 ALA119 LEU120 VAL121 ASP122 ALA123 GLY124 ILE125 ALA126 LEU127 ASN128 SER129 MET130 CYS131 ALA132 SER133 ILE134 PRO135 ILE136 ALA137 ILE138 ILE139 LYS140 ASP141 THR142 SER143 ASP144 ILE145 ILE146 VAL147 ASP148 PRO149 THR150 ALA151 GLU152 GLN153 LEU154 LYS155 ILE156 SER157 LEU158 SER159 VAL160 HIS161 THR162 LEU163 ALA164 LEU165 GLU166 PHE167 VAL168 ASN169 GLY170 GLY171 LYS172 VAL173 VAL174 LYS175 ASN176 VAL177 LEU178 LEU179 LEU180 ASP181 SER182 ASN183 GLY184 ASP185 PHE186 ASN187 GLU188 ASP189 GLN190 LEU191 PHE192 SER193 LEU194 LEU195 GLU196 LEU197 GLY198 GLU199 GLN200 LYS201 CYS202 GLN203 GLU204 LEU205 VAL206 THR207 ASN208 ILE209 ARG210 ARG211 ILE212 ILE213 GLN214 ASP215 ASN216 ILE217 SER218 PRO219 ARG220 LEU221
Unit 5 SER2 LEU3 SER4 VAL5 ALA6 GLU7 LYS8 SER9 TYR10 LEU11 TYR12 ASP13 SER14 LEU15 ALA16 SER17 THR18 PRO19 SER20 ILE21 ARG22 PRO23 ASP24 GLY25 ARG26 LEU27 PRO28 HIS29 GLN30 PHE31 ARG32 PRO33 ILE34 GLU35 ILE36 PHE37 THR38 ASP39 PHE40 LEU41 PRO42 SER43 SER44 ASN45 GLY46 SER47 SER48 ARG49 ILE50 ILE51 ALA52 SER53 ASP54 GLY55 SER56 GLU57 CYS58 ILE59 VAL60 SER61 ILE62 LYS63 SER64 LYS65 VAL66 VAL67 ASP68 HIS69 HIS70 VAL71 GLU72 ASN73 GLU74 LEU75 LEU76 GLN77 VAL78 ASP79 VAL80 ASP81 ILE82 ALA83 GLY84 GLN85 ARG86 ASP87 ASP88 ALA89 LEU90 VAL91 VAL92 GLU93 THR94 ILE95 THR96 SER97 LEU98 LEU99 ASN100 LYS101 VAL102 LEU103 LYS104 SER105 GLY106 SER107 GLY108 VAL109 ASP110 SER111 SER112 LYS113 LEU114 GLN115 LEU116 THR117 LYS118 LYS119 TYR120 SER121 PHE122 LYS123 ILE124 PHE125 VAL126 ASP127 VAL128 LEU129 VAL130 ILE131 SER132 SER133 HIS134 SER135 HIS136 PRO137 VAL138 SER139 LEU140 ILE141 SER142 PHE143 ALA144 ILE145 TYR146 SER147 ALA148 LEU149 ASN150 SER151 THR152 TYR153 LEU154 PRO155 LYS156 LEU157 ILE158 SER159 ALA160 PHE161 PRO170 THR171 PHE172 HIS173 ASP174 TYR175 ASP176 MET177 VAL178 LYS179 LEU180 ASP181 ILE182 ASN183 PRO184 PRO185 LEU186 VAL187 PHE188 ILE189 LEU190 ALA191 VAL192 VAL193 GLY194 ASN195 ASN196 MET197 LEU198 LEU199 ASP200 PRO201 ALA202 ALA203 ASN204 GLU205 SER206 GLU207 VAL208 ALA209 ASN210 ASN211 GLY212 LEU213 ILE214 ILE215 SER216 TRP217 SER218 ASN219 GLY220 LYS221 ILE222 THR223 SER224 PRO225 ILE226 ARG227 SER228 VAL229 ALA230 LEU231 ASN232 ASP233 SER234 ASN235 VAL236 LYS237 SER238 PHE239 LYS240 PRO241 HIS242 LEU243 LEU244 LYS245 GLN246 GLY247 LEU248 ALA249 MET250 VAL251 GLU252 LYS253 TYR254 ALA255 PRO256 ASP257 VAL258 VAL259 ARG260 SER261 LEU262 GLU263 ASN264
Unit 6 ASP5 ARG6 ARG7 ARG8 LEU9 LEU10 GLY11 PRO12 ALA13 ALA14 ALA15 LYS16 PRO17 MET18 ALA19 PHE20 GLU43 GLN44 GLU45 LEU46 SER47 LEU48 HIS49 THR50 GLY51 PHE52 ILE53 GLU54 ASN55 CYS56 ASN57 GLY58 SER59 ALA60 LEU61 VAL62 GLU63 ALA64 ARG65 SER66 LEU67 GLY68 HIS69 GLN70 THR71 SER72 LEU73 ILE74 THR75 ALA76 VAL77 TYR78 GLY79 PRO80 ARG81 SER82 ILE83 ARG84 GLY85 SER86 PHE87 THR88 SER89 GLN90 GLY91 THR92 ILE93 SER94 ILE95 GLN96 LEU97 LYS98 ASN99 GLY100 LEU101 LEU102 GLU103 LYS104 TYR105 ASN106 THR107 ASN108 GLU109 LEU110 LYS111 GLU112 VAL113 SER114 SER115 PHE116 LEU117 MET118 GLY119 ILE120 PHE121 ASN122 SER123 VAL124 VAL125 ASN126 LEU127 SER128 ARG129 TYR130 PRO131 LYS132 SER133 GLY134 ILE135 ASP136 ILE137 PHE138 VAL139 TYR140 LEU141 THR142 TYR143 ASP144 LYS145 ASP146 LEU147 SER163 GLN164 ILE165 SER166 SER167 LEU168 ILE169 PRO170 HIS171 CYS172 ILE173 THR174 SER175 ILE176 THR177 LEU178 ALA179 LEU180 ALA181 ASP182 ALA183 GLY184 ILE185 GLU186 LEU187 VAL188 ASP189 MET190 ALA191 GLY192 ALA193 GLY194 GLU195 ALA196 ASN197 GLY198 THR199 VAL200 VAL201 SER202 PHE203 ILE204 LYS205 ASN206 GLY207 GLU208 GLU209 ILE210 VAL211 GLY212 PHE213 TRP214 LYS215 ASP216 ASP217 GLY218 ASP219 ASP220 GLU221 ASP222 LEU223 LEU224 GLU225 CYS226 LEU227 ASP228 ARG229 CYS230 LYS231 GLU232 GLN233 TYR234 ASN235 ARG236 TYR237 ARG238 ASP239 LEU240 MET241 ILE242 SER243 CYS244 LEU245 MET246 ASN247 GLN248
Unit 7 SER2 THR3 PHE4 ILE5 PHE6 PRO7 GLY8 ASP9 SER10 PHE11 PRO12 VAL13 ASP14 PRO15 THR16 THR17 PRO18 VAL19 LYS20 LEU21 GLY22 PRO23 GLY24 ILE25 TYR26 CYS27 ASP28 PRO29 ASN30 THR31 GLN32 GLU33 ILE34 ARG35 PRO36 VAL37 ASN38 THR39 GLY40 VAL41 LEU42 HIS43 VAL44 SER45 THR54 ALA55 TYR56 ILE57 ASP58 TYR59 SER60 SER61 LYS62 ARG63 TYR64 ILE65 PRO66 SER67 VAL68 ASN69 ASP70 PHE71 VAL72 ILE73 GLY74 VAL75 ILE76 ILE77 GLY78 THR79 PHE80 SER81 ASP82 SER83 TYR84 LYS85 VAL86 SER87 LEU88 GLN89 ASN90 PHE91 SER92 SER93 SER94 VAL95 SER96 LEU97 SER98 TYR99 MET100 ALA101 PHE102 PRO103 ASN104 ALA105 SER106 LYS107 LYS108 ASN109 ARG110 PRO111 THR112 LEU113 GLN114 VAL115 GLY116 ASP117 LEU118 VAL119 TYR120 ALA121 ARG122 VAL123 CYS124 THR125 ALA126 GLU127 LYS128 GLU129 LEU130 GLU131 ALA132 GLU133 ILE134 GLU135 CYS136 PHE137 ASP138 SER139 THR140 THR141 GLY142 ARG143 ASP144 ALA145 GLY146 PHE147 GLY148 ILE149 LEU150 GLU151 ASP152 GLY153 MET154 ILE155 ILE156 ASP157 VAL158 ASN159 LEU160 ASN161 PHE162 ALA163 ARG164 GLN165 LEU166 LEU167 PHE168 ASN169 ASN170 ASP171 PHE172 PRO173 LEU174 LEU175 LYS176 VAL177 LEU178 ALA179 ALA180 HIS181 THR182 LYS183 PHE184 GLU185 VAL186 ALA187 ILE188 GLY189 LEU190 ASN191 GLY192 LYS193 ILE194 TRP195 VAL196 LYS197 CYS198 GLU199 GLU200 LEU201 SER202 ASN203 THR204 LEU205 ALA206 CYS207 TYR208 ARG209 THR210 ILE211 MET212 GLU213 CYS214 CYS215 GLN216 LYS217 ASN218 ASP219 THR220 ALA221 ALA222 PHE223 LYS224 ASP225 ILE226 ALA227 LYS228 ARG229 GLN230 PHE231 LYS232 GLU233 ILE234 LEU235
Unit 8 ILE5 THR6 ILE7 THR8 LYS9 ARG10 ASN11 GLY12 ALA13 PHE14 SER50 ASP51 SER52 GLN53 ILE54 VAL55 THR56 PRO57 GLY58 GLU59 LEU60 VAL61 THR62 ASP63 ASP64 PRO65 ILE66 TRP67 MET68 ARG69 GLY70 HIS71 GLY72 THR73 TYR74 PHE75 LEU76 ASP77 ASN78 MET79 THR80 TYR81 SER82 SER83 VAL84 ALA85 GLY86 THR87 VAL88 SER89 ARG90 VAL91 ASN92 ARG93 LEU94 LEU95 SER96 VAL97 ILE98 PRO99 LEU100 LYS101 GLY102 ARG103 TYR104 ALA105 PRO106 GLU107 THR108 GLY109 ASP110 HIS111 VAL112 VAL113 GLY114 ARG115 ILE116 ALA117 GLU118 VAL119 GLY120 ASN121 LYS122 ARG123 TRP124 LYS125 VAL126 ASP127 ILE128 GLY129 GLY130 LYS131 GLN132 HIS133 ALA134 VAL135 LEU136 MET137 LEU138 GLY139 SER140 VAL141 ASN142 LEU143 PRO144 GLY145 GLN158 MET159 ARG160 SER161 PHE162 LEU163 LYS164 GLU165 GLY166 ASP167 LEU168 LEU169 ASN170 ALA171 GLU172 VAL173 GLN174 SER175 LEU176 PHE177 GLN178 ASP179 GLY180 SER181 ALA182 SER183 LEU184 HIS185 THR186 ARG187 SER188 LEU189 LYS190 TYR191 GLY192 LYS193 LEU194 ARG195 ASN196 GLY197 MET198 PHE199 CYS200 GLN201 VAL202 PRO203 SER204 SER205 LEU206 ILE207 VAL208 ARG209 ALA210 LYS211 ASN212 HIS213 THR214 HIS215 ASN216 LEU217 PRO218 GLY219 ASN220 ILE221 THR222 VAL223 VAL224 LEU225 GLY226 VAL227 ASN228 GLY229 TYR230 ILE231 TRP232 LEU233 ARG234 LYS235 THR236 SER237 GLN238 MET239 ASP240 LEU241 ALA242 ARG243 ASP244 THR245 PRO246 SER247 ALA248 ASN249 SER277 TRP278 GLN279 ILE280 TYR281 SER282 ASP283 GLU284 ASN285 ASP286 PRO287 SER288 ILE289 SER290 ASN291 ASN292 ILE293 ARG294 GLN295 ALA296 ILE297 CYS298 ARG299 TYR300 ALA301 ASN302 VAL303 ILE304 LYS305 ALA306 LEU307 ALA308 PHE309 CYS310 GLU311 ILE312 GLY313 ILE314 THR315 GLN316 GLN317 ARG318 ILE319 VAL320 SER321 ALA322 TYR323 GLU324 ALA325 SER326 MET327 VAL328 TYR329 SER330 ASN331 VAL332 GLY333 GLU334 LEU335 ILE336 GLU337 LYS338 ASN339 VAL340 MET341 GLU342 SER343 ILE344 GLY345 SER346 ASP347 ILE348 LEU349 THR350 ALA351 GLU352 LYS353 MET354 ARG355 GLY356 ASN357
Unit 9 PHE5 GLN6 PHE7 PRO8 GLU9 ILE10 ALA11 TYR12 PRO13 GLY14 LYS15 LEU16 ILE17 CYS18 PRO19 GLN20 TYR21 GLY22 THR23 GLU24 ASN25 LYS26 ASP27 GLY28 GLU29 ASP30 ILE31 ILE32 PHE33 ASN34 TYR35 VAL36 PRO37 GLY38 PRO39 GLY40 THR41 LYS42 LEU43 ILE44 GLN45 TYR46 GLU47 HIS48 ASN49 GLY50 ARG51 THR52 LEU53 GLU54 ALA55 ILE56 THR57 ALA58 THR59 LEU60 VAL61 GLY62 THR63 VAL64 ARG65 CYS66 GLU67 GLU68 GLU69 LYS70 ASN105 ILE106 LEU107 VAL108 SER109 VAL110 LEU111 PRO112 GLY113 PHE128 ALA129 ASN130 ASN131 LEU132 PRO133 LYS134 GLU135 GLY136 ASP137 ILE138 VAL139 LEU140 THR141 ARG142 VAL143 THR144 ARG145 LEU146 SER147 LEU148 GLN149 ARG150 ALA151 ASN152 VAL153 GLU154 ILE155 LEU156 ALA157 VAL158 GLU159 ASP160 LYS161 PRO162 ALA186 THR187 PHE188 SER189 VAL190 SER191 GLN192 ALA193 SER194 SER195 ASP196 LEU197 GLY198 GLU199 THR200 PHE201 ARG202 GLY203 ILE204 ILE205 ARG206 SER207 GLN208 ASP209 VAL210 ARG211 SER212 THR213 ASP214 ARG215 ASP216 ARG217 VAL218 LYS219 VAL220 ILE221 GLU222 CYS223 PHE224 LYS225 PRO226 GLY227 ASP228 ILE229 VAL230 ARG231 ALA232 GLN233 VAL234 LEU235 SER236 LEU237 GLY238 ASP239 GLY240 THR241 ASN242 TYR243 TYR244 LEU245 THR246 THR247 ALA248 ARG249 ASN250 ASP251 LEU252 GLY253 VAL254 VAL255 PHE256 ALA257 ARG258 ALA259 ALA260 ASN261 GLY262 ALA263 GLY264 GLY265 LEU266 MET267 TYR268 ALA269 THR270 ASP271 TRP272 GLN273 MET274 MET275 THR276 SER277 PRO278 VAL279 THR280 GLY281 ALA282 THR283 GLU284 LYS285 ARG286 LYS287 CYS288 ALA289 LYS290 PRO291
Unit 10 MET128 VAL129 GLU130 LYS131 PRO132 GLN133 LEU134 LYS135 PHE136 LYS137 SER138 PRO139 ILE140 ASP141 ASN142 SER143 GLU144 SER145 HIS146 PRO147 PHE148 ILE149 PRO150 LEU151 LEU152 LYS153 GLU154 LYS155 PRO156 ASN157 ALA158 LEU159 LYS160 PRO161 LEU162 SER163 GLU164 SER165 LEU166 ARG167 LEU168 VAL169 ASP170 ASP171 ASP172 GLU173 ASN174 ASN175 PRO176 SER177 HIS178 TYR179 PRO180 HIS181 PRO182 TYR183 GLU184 TYR185 GLU186 ILE187 ASP188 HIS189 GLN190 GLU191 TYR192 SER193 PRO194 GLU195 ILE196 LEU197 GLN198 ILE199 ARG200 GLU201 GLU202 ILE203 PRO204 SER205 LYS206 SER207 TRP208 ASP209 ASP210 SER211 VAL212 PRO213 ILE214 TRP215 VAL216 ASP217 THR218 SER219 THR220 GLU221 LEU222 GLU223 SER224 MET225 LEU226 GLU227 ASP228 LEU229 LYS230 ASN231 THR232 LYS233 GLU234 ILE235 ALA236 VAL237 ASN238 LEU239 GLU240 HIS241 HIS242 ASP243 TYR244 ARG245 SER246 TYR247 TYR248 GLY249 ILE250 VAL251 CYS252 LEU253 MET254 GLN255 ILE256 SER257 THR258 ARG259 GLU260 ARG261 ASP262 TYR263 LEU264 VAL265 ASP266 THR267 LEU268 LYS269 LEU270 ARG271 GLU272 ASN273 LEU274 HIS275 ILE276 LEU277 ASN278 GLU279 VAL280 PHE281 THR282 ASN283 PRO284 SER285 ILE286 VAL287 LYS288 VAL289 PHE290 HIS291 GLY292 ALA293 PHE294 MET295 ASP296 ILE297 ILE298 TRP299 LEU300 GLN301 ARG302 ASP303 LEU304 GLY305 LEU306 TYR307 VAL308 VAL309 GLY310 LEU311 PHE312 ASP313 THR314 TYR315 HIS316 ALA317 SER318 LYS319 ALA320 ILE321 GLY322 LEU323 PRO324 ARG325 HIS326 SER327 LEU328 ALA329 TYR330 LEU331 LEU332 GLU333 ASN334 PHE335 ALA336 ASN337 PHE338 LYS339 THR340 SER341 LYS342 LYS343 TYR344 GLN345 LEU346 ALA347 ASP348 TRP349 ARG350 ILE351 ARG352 PRO353 LEU354 SER355 LYS356 PRO357 MET358 THR359 ALA360 TYR361 ALA362 ARG363 ALA364 ASP365 THR366 HIS367 PHE368 LEU369 LEU370 ASN371 ILE372 TYR373 ASP374 GLN375 LEU376 ARG377 ASN378 LYS379 LEU380 ILE381 GLU382 SER383 ASN384 LYS385 LEU386 ALA387 GLY388 VAL389 LEU390 TYR391 GLU392 SER393 ARG394 ASN395 VAL396 ALA397 LYS398 ARG399 ARG400 PHE401 GLU402 TYR403 SER404 LYS405 TYR406 ARG407 PRO408 LEU409 THR410 PRO411 SER412 SER413 GLU414 VAL415 TYR416 SER417 PRO418 ILE419 GLU420 LYS421 GLU422 SER423 PRO424 TRP425 LYS426 ILE427 LEU428 MET429 TYR430 GLN431 TYR432 ASN433 ILE434 PRO435 PRO436 GLU437 ARG438 GLU439 VAL440 LEU441 VAL442 ARG443 GLU444 LEU445 TYR446 GLN447 TRP448 ARG449 ASP450 LEU451 ILE452 ALA453 ARG454 ARG455 ASP456 ASP457 GLU458 SER459 PRO460 ARG461 PHE462 VAL463 MET464 PRO465 ASN466 GLN467 LEU468 LEU469 ALA470 ALA471 LEU472 VAL473 ALA474 TYR475 THR476 PRO477 THR478 ASP479 VAL480 ILE481 GLY482 VAL483 VAL484 SER485 LEU486 THR487 ASN488 GLY489 VAL490 THR491 GLU492 HIS493 VAL494 ARG495 GLN496 ASN497 ALA498 LYS499 LEU500 LEU501 ALA502 ASN503 LEU504 ILE505 ARG506 ASP507 ALA508 LEU509 ARG510 ASN511 ILE512 LYS513 ASN514 THR515 ASN516 SER525 GLU526 THR527 LYS528 ALA529 ASP530 GLY531 ILE532 LEU533 LEU534 GLU535 THR536 ILE537 SER538 VAL539 PRO540 GLN541 ILE542 ARG543 ASP544 VAL545 MET546 GLU547 ARG548 PHE549 SER550 VAL551 LEU552 CYS553 ASN554 SER555 ASN556 ILE557 SER558 LYS559 SER560 ARG561 ALA562 LYS563 PRO564 VAL565 THR566 ASN567 SER568 SER569 ILE570 LEU571 LEU572 GLY573 LYS574 ILE575 LEU576 PRO577 ARG578 GLU579 GLU580 HIS581 ASP582 ILE583 ALA584 TYR585 SER586 LYS587 ASP588 GLY589 LEU590 PRO591 ASN592 LYS593 VAL594 LYS595 THR596 GLU597 ASP598 ILE599 ARG600 ILE601 ARG602 ALA603 GLN604 ASN605 PHE606 LYS607 SER608 ALA609 LEU610 ALA611 ASN612 LEU613 GLU614 ASP615 ILE616 ILE617 PHE618 GLU619 ILE620 GLU621 LYS622 PRO623 LEU624 VAL625 VAL626 PRO627 VAL628
Nucleic acids
Unit 11 A19 A20 A21 A22 A23 A24
Ligands
Unit 12 MG301 MPD302
Unit 13 MES301
Unit 14 PO4301
Unit 15 MG101 PO4102
Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany