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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF CYTOSOLIC NUCLEOTIDASE II (LPG0095) IN WITH GMP FROM LEGIONELLA PNEUMOPHILA, NORTHEAST STRUCTURAL CONSORTIUM TARGET LGR1
Keywords STRUCTURAL GENOMICS, PSI-BIOLOGY, NORTHEAST STRUCTURAL GENOM CONSORTIUM, NESG, 3-DOMAINED STRUCTURE THAT RESEMBLES HAD, NUCLEOTIDASE. IT CATALYZES THE BREAKDOWN OF SELECTED NUCLEO MONOPHOSPHATES, CYTOSOL, HYDROLASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   4OHF     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   CYTOSOLIC IMP-GMP SPECIFIC 5'-NUCLEOTIDASE  A 455 3736 0
2  Protein   CYTOSOLIC IMP-GMP SPECIFIC 5'-NUCLEOTIDASE  B 458 3752 0
3  Protein   CYTOSOLIC IMP-GMP SPECIFIC 5'-NUCLEOTIDASE  C 438 3594 0
4  Protein   CYTOSOLIC IMP-GMP SPECIFIC 5'-NUCLEOTIDASE  D 456 3742 0
5  Ligand   CYTOSOLIC IMP-GMP SPECIFIC 5'-NUCLEOTIDASE  A 3 0 34
6  Ligand   CYTOSOLIC IMP-GMP SPECIFIC 5'-NUCLEOTIDASE  B 3 0 11
7  Ligand   CYTOSOLIC IMP-GMP SPECIFIC 5'-NUCLEOTIDASE  C 4 0 35
8  Ligand   CYTOSOLIC IMP-GMP SPECIFIC 5'-NUCLEOTIDASE  D 3 0 11
9 Water     228 0 228
total       2048 14824 319
Proteins
Unit 1 LYS5 VAL6 PHE7 VAL8 ASN9 ARG10 ILE11 ILE12 ASN13 MET14 ARG15 LYS16 ILE17 LYS18 LEU19 ILE20 GLY21 LEU22 ASP23 MET24 ASP25 HIS26 THR27 LEU28 ILE29 ARG30 TYR31 ASN32 SER33 LYS34 ASN35 PHE36 GLU37 SER38 LEU39 VAL40 TYR41 ASP42 LEU43 VAL44 LYS45 GLU46 ARG47 LEU48 ALA49 GLU50 SER51 PHE52 HIS53 TYR54 PRO55 GLU56 GLU57 ILE58 LYS59 LYS60 PHE61 LYS62 PHE63 ASN64 PHE65 ASP66 ASP67 ALA68 ILE69 ARG70 GLY71 LEU72 VAL73 ILE74 ASP75 SER76 LYS77 ASN78 GLY79 ASN80 ILE81 LEU82 LYS83 LEU84 SER85 ARG86 TYR87 GLY88 ALA89 ILE90 ARG91 LEU92 SER93 TYR94 HIS95 GLY96 THR97 LYS98 GLN99 ILE100 SER101 PHE102 SER103 ASP104 GLN105 LYS106 LYS107 ILE108 TYR109 ARG110 SER111 ILE112 TYR113 VAL114 ASP115 LEU116 GLY117 ASP118 PRO119 ASN120 TYR121 MET122 ALA123 ILE124 ASP125 THR126 SER127 PHE128 SER129 ILE130 ALA131 PHE132 CYS133 ILE134 LEU135 TYR136 GLY137 GLN138 LEU139 VAL140 ASP141 LEU142 LYS143 ASP144 THR145 ASN146 PRO147 ASP148 LYS149 MET150 PRO151 SER152 TYR153 GLN154 ALA155 ILE156 ALA157 GLN158 ASP159 VAL160 GLN161 TYR162 CYS163 VAL164 ASP165 LYS166 VAL167 HIS168 SER169 ASP170 GLY171 THR172 LEU173 LYS174 ASN175 ILE176 ILE177 ILE178 LYS179 ASN180 LEU181 LYS182 LYS183 TYR184 VAL185 ILE186 ARG187 GLU188 LYS189 GLU190 VAL191 VAL192 GLU193 GLY194 LEU195 LYS196 HIS197 PHE198 ILE199 ARG200 TYR201 GLY202 LYS203 LYS204 ILE205 PHE206 ILE207 LEU208 THR209 ASN210 SER211 GLU212 TYR213 SER214 TYR215 SER216 LYS217 LEU218 LEU219 LEU220 ASP221 TYR222 ALA223 LEU224 SER225 PRO226 PHE227 LEU228 ASP229 LYS230 GLY231 GLU232 HIS233 TRP234 GLN235 GLY236 LEU237 PHE238 GLU239 PHE240 VAL241 ILE242 THR243 LEU244 ALA245 ASN246 LYS247 PRO248 ARG249 PHE250 PHE251 TYR252 ASP253 ASN254 LEU255 ARG256 PHE257 LEU258 SER259 VAL260 ASN261 PRO262 GLU263 ASN264 GLY265 THR266 MET267 THR268 ASN269 VAL270 HIS271 GLY272 PRO273 ILE274 VAL275 PRO276 GLY277 VAL278 TYR279 GLN280 GLY281 GLY282 ASN283 ALA284 LYS285 LYS286 PHE287 THR288 GLU289 ASP290 LEU291 GLY292 VAL293 GLY294 GLY295 ASP296 GLU297 ILE298 LEU299 TYR300 ILE301 GLY302 ASP303 HIS304 ILE305 TYR306 GLY307 ASP308 ILE309 LEU310 ARG311 LEU312 LYS313 LYS314 ASP315 CYS316 ASN317 TRP318 ARG319 THR320 ALA321 LEU322 VAL323 VAL324 GLU325 GLU326 LEU327 GLY328 GLU329 GLU330 ILE331 ALA332 SER333 GLN334 ILE335 ARG336 ALA337 LEU338 PRO339 ILE340 GLU341 LYS342 LYS343 ILE344 GLY345 GLU346 ALA347 MET348 ALA349 ILE350 LYS351 LYS352 GLU353 LEU354 GLU355 GLN356 LYS357 TYR358 VAL359 ASP360 LEU361 CYS362 THR363 ARG364 SER365 ILE366 ASP367 GLU368 SER369 TYR373 ASP374 GLN375 GLU376 ILE377 HIS378 ASP379 LEU380 GLN381 LEU382 GLN383 ILE384 SER385 THR386 VAL387 ASP388 LEU389 GLN390 ILE391 SER392 ARG393 LEU394 LEU395 GLN396 GLU397 GLN398 ASN399 SER400 PHE401 TYR402 ASN403 PRO404 LYS405 TRP406 GLU407 ARG408 VAL409 PHE410 ARG411 ALA412 GLY413 ALA414 GLU415 GLU416 SER417 TYR418 PHE419 ALA420 TYR421 GLN422 VAL423 ASP424 ARG425 PHE426 ALA427 CYS428 ILE429 TYR430 MET431 GLU432 LYS433 LEU434 SER435 ASP436 LEU437 LEU438 GLU439 HIS440 SER441 PRO442 MET443 THR444 TYR445 PHE446 ARG447 ALA448 ASN449 ARG450 ARG451 LEU452 LEU453 ALA454 HIS455 ASP456 ILE457 ASP458 ILE459 LEU460 GLU461 HIS462
Unit 2 ASP2 THR3 HIS4 LYS5 VAL6 PHE7 VAL8 ASN9 ARG10 ILE11 ILE12 ASN13 MET14 ARG15 LYS16 ILE17 LYS18 LEU19 ILE20 GLY21 LEU22 ASP23 MET24 ASP25 HIS26 THR27 LEU28 ILE29 ARG30 TYR31 ASN32 SER33 LYS34 ASN35 PHE36 GLU37 SER38 LEU39 VAL40 TYR41 ASP42 LEU43 VAL44 LYS45 GLU46 ARG47 LEU48 ALA49 GLU50 SER51 PHE52 HIS53 TYR54 PRO55 GLU56 GLU57 ILE58 LYS59 LYS60 PHE61 LYS62 PHE63 ASN64 PHE65 ASP66 ASP67 ALA68 ILE69 ARG70 GLY71 LEU72 VAL73 ILE74 ASP75 SER76 LYS77 ASN78 GLY79 ASN80 ILE81 LEU82 LYS83 LEU84 SER85 ARG86 TYR87 GLY88 ALA89 ILE90 ARG91 LEU92 SER93 TYR94 HIS95 GLY96 THR97 LYS98 GLN99 ILE100 SER101 PHE102 SER103 ASP104 GLN105 LYS106 LYS107 ILE108 TYR109 ARG110 SER111 ILE112 TYR113 VAL114 ASP115 LEU116 GLY117 ASP118 PRO119 ASN120 TYR121 MET122 ALA123 ILE124 ASP125 THR126 SER127 PHE128 SER129 ILE130 ALA131 PHE132 CYS133 ILE134 LEU135 TYR136 GLY137 GLN138 LEU139 VAL140 ASP141 LEU142 LYS143 ASP144 THR145 ASN146 PRO147 ASP148 LYS149 MET150 PRO151 SER152 TYR153 GLN154 ALA155 ILE156 ALA157 GLN158 ASP159 VAL160 GLN161 TYR162 CYS163 VAL164 ASP165 LYS166 VAL167 HIS168 SER169 ASP170 GLY171 THR172 LEU173 LYS174 ASN175 ILE176 ILE177 ILE178 LYS179 ASN180 LEU181 LYS182 LYS183 TYR184 VAL185 ILE186 ARG187 GLU188 LYS189 GLU190 VAL191 VAL192 GLU193 GLY194 LEU195 LYS196 HIS197 PHE198 ILE199 ARG200 TYR201 GLY202 LYS203 LYS204 ILE205 PHE206 ILE207 LEU208 THR209 ASN210 SER211 GLU212 TYR213 SER214 TYR215 SER216 LYS217 LEU218 LEU219 LEU220 ASP221 TYR222 ALA223 LEU224 SER225 PRO226 PHE227 LEU228 ASP229 LYS230 GLY231 GLU232 HIS233 TRP234 GLN235 GLY236 LEU237 PHE238 GLU239 PHE240 VAL241 ILE242 THR243 LEU244 ALA245 ASN246 LYS247 PRO248 ARG249 PHE250 PHE251 TYR252 ASP253 ASN254 LEU255 ARG256 PHE257 LEU258 SER259 VAL260 ASN261 PRO262 GLU263 ASN264 GLY265 THR266 MET267 THR268 ASN269 VAL270 HIS271 GLY272 PRO273 ILE274 VAL275 PRO276 GLY277 VAL278 TYR279 GLN280 GLY281 GLY282 ASN283 ALA284 LYS285 LYS286 PHE287 THR288 GLU289 ASP290 LEU291 GLY292 VAL293 GLY294 GLY295 ASP296 GLU297 ILE298 LEU299 TYR300 ILE301 GLY302 ASP303 HIS304 ILE305 TYR306 GLY307 ASP308 ILE309 LEU310 ARG311 LEU312 LYS313 LYS314 ASP315 CYS316 ASN317 TRP318 ARG319 THR320 ALA321 LEU322 VAL323 VAL324 GLU325 GLU326 LEU327 GLY328 GLU329 GLU330 ILE331 ALA332 SER333 GLN334 ILE335 ARG336 ALA337 LEU338 PRO339 ILE340 GLU341 LYS342 LYS343 ILE344 GLY345 GLU346 ALA347 MET348 ALA349 ILE350 LYS351 LYS352 GLU353 LEU354 GLU355 GLN356 LYS357 TYR358 VAL359 ASP360 LEU361 CYS362 THR363 ARG364 SER365 ILE366 ASP367 GLU368 SER369 SER370 GLN371 GLN372 TYR373 ASP374 GLN375 GLU376 ILE377 HIS378 ASP379 LEU380 GLN381 LEU382 GLN383 ILE384 SER385 THR386 VAL387 ASP388 LEU389 GLN390 ILE391 SER392 ARG393 LEU394 LEU395 GLN396 GLU397 GLN398 ASN399 SER400 PHE401 TYR402 ASN403 PRO404 LYS405 TRP406 GLU407 ARG408 VAL409 PHE410 ARG411 ALA412 GLY413 ALA414 GLU415 GLU416 SER417 TYR418 PHE419 ALA420 TYR421 GLN422 VAL423 ASP424 ARG425 PHE426 ALA427 CYS428 ILE429 TYR430 MET431 GLU432 LYS433 LEU434 SER435 ASP436 LEU437 LEU438 GLU439 HIS440 SER441 PRO442 MET443 THR444 TYR445 PHE446 ARG447 ALA448 ASN449 ARG450 ARG451 LEU452 LEU453 ALA454 HIS455 ASP456 ILE457 ASP458 ILE459
Unit 3 LYS5 VAL6 PHE7 VAL8 ASN9 ARG10 ILE11 ILE12 ASN13 MET14 ARG15 LYS16 ILE17 LYS18 LEU19 ILE20 GLY21 LEU22 ASP23 MET24 ASP25 HIS26 THR27 LEU28 ILE29 ARG30 TYR31 ASN32 SER33 LYS34 ASN35 PHE36 GLU37 SER38 LEU39 VAL40 TYR41 ASP42 LEU43 VAL44 LYS45 GLU46 ARG47 LEU48 ALA49 GLU50 SER51 PHE52 HIS53 TYR54 PRO55 GLU56 GLU57 ILE58 LYS59 LYS60 PHE61 LYS62 PHE63 ASN64 PHE65 ASP66 ASP67 ALA68 ILE69 ARG70 GLY71 LEU72 VAL73 ILE74 ASP75 SER76 LYS77 ASN78 GLY79 ASN80 ILE81 LEU82 LYS83 LEU84 SER85 ARG86 TYR87 GLY88 ALA89 ILE90 ARG91 LEU92 SER93 TYR94 HIS95 GLY96 THR97 LYS98 GLN99 ILE100 SER101 PHE102 SER103 ASP104 GLN105 LYS106 LYS107 ILE108 TYR109 ARG110 SER111 ILE112 TYR113 VAL114 ASP115 LEU116 GLY117 ASP118 PRO119 ASN120 TYR121 MET122 ALA123 ILE124 ASP125 THR126 SER127 PHE128 SER129 ILE130 ALA131 PHE132 CYS133 ILE134 LEU135 TYR136 GLY137 GLN138 LEU139 VAL140 ASP141 LEU142 LYS143 ASP144 THR145 ASN146 PRO147 ASP148 LYS149 MET150 PRO151 SER152 TYR153 GLN154 ALA155 ILE156 ALA157 GLN158 ASP159 VAL160 GLN161 TYR162 CYS163 VAL164 ASP165 LYS166 VAL167 HIS168 SER169 ASP170 GLY171 THR172 LEU173 LYS174 ASN175 ILE176 ILE177 ILE178 LYS179 ASN180 LEU181 LYS182 LYS183 TYR184 VAL185 ILE186 ARG187 GLU188 LYS189 GLU190 VAL191 VAL192 GLU193 GLY194 LEU195 LYS196 HIS197 PHE198 ILE199 ARG200 TYR201 GLY202 LYS203 LYS204 ILE205 PHE206 ILE207 LEU208 THR209 ASN210 SER211 GLU212 TYR213 SER214 TYR215 SER216 LYS217 LEU218 LEU219 LEU220 ASP221 TYR222 ALA223 LEU224 SER225 PRO226 PHE227 LEU228 ASP229 LYS230 GLY231 GLU232 HIS233 TRP234 GLN235 GLY236 LEU237 PHE238 GLU239 PHE240 VAL241 ILE242 THR243 LEU244 ALA245 ASN246 LYS247 PRO248 ARG249 PHE250 PHE251 TYR252 ASP253 ASN254 LEU255 ARG256 PHE257 LEU258 SER259 VAL260 ASN261 PRO262 GLU263 ASN264 GLY265 THR266 MET267 THR268 ASN269 VAL270 HIS271 GLY272 PRO273 ILE274 VAL275 PRO276 GLY277 VAL278 TYR279 GLN280 GLY281 GLY282 ASN283 ALA284 LYS285 LYS286 PHE287 THR288 GLU289 ASP290 LEU291 GLY292 VAL293 GLY294 GLY295 ASP296 GLU297 ILE298 LEU299 TYR300 ILE301 GLY302 ASP303 HIS304 ILE305 TYR306 GLY307 ASP308 ILE309 LEU310 ARG311 LEU312 LYS313 LYS314 ASP315 CYS316 ASN317 TRP318 ARG319 THR320 ALA321 LEU322 VAL323 VAL324 GLU325 GLU326 LEU327 GLY328 GLU329 GLU330 ILE331 ALA332 SER333 GLN334 ILE335 ARG336 ALA337 LEU338 PRO339 ILE340 GLU341 LYS342 LYS343 ILE344 GLY345 GLU346 ALA347 MET348 ALA349 ILE350 LYS351 LYS352 GLU353 LEU354 GLU355 GLN356 LYS357 TYR358 VAL359 ASP360 LEU361 HIS378 ASP379 LEU380 GLN381 LEU382 GLN383 ILE384 SER385 THR386 VAL387 ASP388 LEU389 GLN390 ILE391 SER392 ARG393 LEU394 LEU395 GLN396 GLU397 GLN398 ASN399 SER400 PHE401 TYR402 ASN403 PRO404 LYS405 TRP406 GLU407 ARG408 VAL409 PHE410 ARG411 ALA412 GLY413 ALA414 GLU415 GLU416 SER417 TYR418 PHE419 ALA420 TYR421 GLN422 VAL423 ASP424 ARG425 PHE426 ALA427 CYS428 ILE429 TYR430 MET431 GLU432 LYS433 LEU434 SER435 ASP436 LEU437 LEU438 GLU439 HIS440 SER441 PRO442 MET443 THR444 TYR445 PHE446 ARG447 ALA448 ASN449 ARG450 ARG451 LEU452 LEU453 ALA454 HIS455 ASP456 ILE457 ASP458
Unit 4 THR3 HIS4 LYS5 VAL6 PHE7 VAL8 ASN9 ARG10 ILE11 ILE12 ASN13 MET14 ARG15 LYS16 ILE17 LYS18 LEU19 ILE20 GLY21 LEU22 ASP23 MET24 ASP25 HIS26 THR27 LEU28 ILE29 ARG30 TYR31 ASN32 SER33 LYS34 ASN35 PHE36 GLU37 SER38 LEU39 VAL40 TYR41 ASP42 LEU43 VAL44 LYS45 GLU46 ARG47 LEU48 ALA49 GLU50 SER51 PHE52 HIS53 TYR54 PRO55 GLU56 GLU57 ILE58 LYS59 LYS60 PHE61 LYS62 PHE63 ASN64 PHE65 ASP66 ASP67 ALA68 ILE69 ARG70 GLY71 LEU72 VAL73 ILE74 ASP75 SER76 LYS77 ASN78 GLY79 ASN80 ILE81 LEU82 LYS83 LEU84 SER85 ARG86 TYR87 GLY88 ALA89 ILE90 ARG91 LEU92 SER93 TYR94 HIS95 GLY96 THR97 LYS98 GLN99 ILE100 SER101 PHE102 SER103 ASP104 GLN105 LYS106 LYS107 ILE108 TYR109 ARG110 SER111 ILE112 TYR113 VAL114 ASP115 LEU116 GLY117 ASP118 PRO119 ASN120 TYR121 MET122 ALA123 ILE124 ASP125 THR126 SER127 PHE128 SER129 ILE130 ALA131 PHE132 CYS133 ILE134 LEU135 TYR136 GLY137 GLN138 LEU139 VAL140 ASP141 LEU142 LYS143 ASP144 THR145 ASN146 PRO147 ASP148 LYS149 MET150 PRO151 SER152 TYR153 GLN154 ALA155 ILE156 ALA157 GLN158 ASP159 VAL160 GLN161 TYR162 CYS163 VAL164 ASP165 LYS166 VAL167 HIS168 SER169 ASP170 GLY171 THR172 LEU173 LYS174 ASN175 ILE176 ILE177 ILE178 LYS179 ASN180 LEU181 LYS182 LYS183 TYR184 VAL185 ILE186 ARG187 GLU188 LYS189 GLU190 VAL191 VAL192 GLU193 GLY194 LEU195 LYS196 HIS197 PHE198 ILE199 ARG200 TYR201 GLY202 LYS203 LYS204 ILE205 PHE206 ILE207 LEU208 THR209 ASN210 SER211 GLU212 TYR213 SER214 TYR215 SER216 LYS217 LEU218 LEU219 LEU220 ASP221 TYR222 ALA223 LEU224 SER225 PRO226 PHE227 LEU228 ASP229 LYS230 GLY231 GLU232 HIS233 TRP234 GLN235 GLY236 LEU237 PHE238 GLU239 PHE240 VAL241 ILE242 THR243 LEU244 ALA245 ASN246 LYS247 PRO248 ARG249 PHE250 PHE251 TYR252 ASP253 ASN254 LEU255 ARG256 PHE257 LEU258 SER259 VAL260 ASN261 PRO262 GLU263 ASN264 GLY265 THR266 MET267 THR268 ASN269 VAL270 HIS271 GLY272 PRO273 ILE274 VAL275 PRO276 GLY277 VAL278 TYR279 GLN280 GLY281 GLY282 ASN283 ALA284 LYS285 LYS286 PHE287 THR288 GLU289 ASP290 LEU291 GLY292 VAL293 GLY294 GLY295 ASP296 GLU297 ILE298 LEU299 TYR300 ILE301 GLY302 ASP303 HIS304 ILE305 TYR306 GLY307 ASP308 ILE309 LEU310 ARG311 LEU312 LYS313 LYS314 ASP315 CYS316 ASN317 TRP318 ARG319 THR320 ALA321 LEU322 VAL323 VAL324 GLU325 GLU326 LEU327 GLY328 GLU329 GLU330 ILE331 ALA332 SER333 GLN334 ILE335 ARG336 ALA337 LEU338 PRO339 ILE340 GLU341 LYS342 LYS343 ILE344 GLY345 GLU346 ALA347 MET348 ALA349 ILE350 LYS351 LYS352 GLU353 LEU354 GLU355 GLN356 LYS357 TYR358 VAL359 ASP360 LEU361 CYS362 THR363 ARG364 SER365 ILE366 ASP367 GLU368 SER369 SER370 GLN371 GLN372 TYR373 ASP374 GLN375 GLU376 ILE377 HIS378 ASP379 LEU380 GLN381 LEU382 GLN383 ILE384 SER385 THR386 VAL387 ASP388 LEU389 GLN390 ILE391 SER392 ARG393 LEU394 LEU395 GLN396 GLU397 GLN398 ASN399 SER400 PHE401 TYR402 ASN403 PRO404 LYS405 TRP406 GLU407 ARG408 VAL409 PHE410 ARG411 ALA412 GLY413 ALA414 GLU415 GLU416 SER417 TYR418 PHE419 ALA420 TYR421 GLN422 VAL423 ASP424 ARG425 PHE426 ALA427 CYS428 ILE429 TYR430 MET431 GLU432 LYS433 LEU434 SER435 ASP436 LEU437 LEU438 GLU439 HIS440 SER441 PRO442 MET443 THR444 TYR445 PHE446 ARG447 ALA448 ASN449 ARG450 ARG451 LEU452 LEU453 ALA454 HIS455 ASP456 ILE457 ASP458
Ligands
Unit 5 5GP501 PO4502 PO4503
Unit 6 PO4501 PO4502 MG503
Unit 7 5GP501 PO4502 PO4503 MG504
Unit 8 PO4501 PO4502 MG503
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany