4ODW - Sequence, Chains, Asymmetric and Biological Units

• Title: UNLIGANDED FAB STRUCTURE OF LIPID A-SPECIFIC ANTIBODY A6
• Keywords: CARBOHYDRATE BINDING, IMMUNE SYSTEM
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	4ODW	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	A6 FAB (IGG2B KAPPA) LIGHT CHAIN	L	214	1669	0
2	Protein	A6 FAB (IGG2B) HEAVY CHAIN	H	214	1618	0
3	Protein	A6 FAB (IGG2B KAPPA) LIGHT CHAIN	B	214	1669	0
4	Protein	A6 FAB (IGG2B) HEAVY CHAIN	A	208	1578	0
5	Ligand	A6 FAB (IGG2B) HEAVY CHAIN	A	1	0	8
6	Water			16	0	16
total				867	6534	24

Proteins

Unit 1	ASP 1 ILE 2 VAL 3 LEU 4 THR 5 GLN 6 SER 7 THR 8 SER 9 SER 10 LEU 11 SER 12 ALA 13 SER 14 LEU 15 GLY 16 ASP 17 ARG 18 VAL 19 THR 20 ILE 21 THR 22 CYS 23 ARG 24 ALA 25 SER 26 GLN 27 ASP 28 ILE 29 ARG 30 ASN 31 TYR 32 LEU 33 SER 34 TRP 35 TYR 36 GLN 37 GLN 38 ARG 39 PRO 40 ASP 41 GLY 42 THR 43 VAL 44 LYS 45 LEU 46 LEU 47 ILE 48 TYR 49 TYR 50 THR 51 SER 52 LYS 53 LEU 54 HIS 55 SER 56 GLY 57 VAL 58 PRO 59 SER 60 ARG 61 PHE 62 SER 63 GLY 64 SER 65 GLY 66 SER 67 GLY 68 THR 69 ASP 70 TYR 71 SER 72 LEU 73 THR 74 ILE 75 THR 76 ASN 77 LEU 78 GLU 79 GLN 80 GLU 81 ASP 82 ILE 83 ALA 84 THR 85 TYR 86 PHE 87 CYS 88 GLN 89 GLN 90 GLY 91 LYS 92 THR 93 LEU 94 PRO 95 LEU 95A TYR 96 THR 97 PHE 98 GLY 99 GLY 100 GLY 101 THR 102 LYS 103 LEU 104 GLU 105 ILE 106 LYS 107 ARG 108 ALA 109 ASP 110 ALA 111 ALA 112 PRO 113 THR 114 VAL 115 SER 116 ILE 117 PHE 118 PRO 119 PRO 120 SER 121 SER 122 GLU 123 GLN 124 LEU 125 THR 126 SER 127 GLY 128 GLY 129 ALA 130 SER 131 VAL 132 VAL 133 CYS 134 PHE 135 LEU 136 ASN 137 ASN 138 PHE 139 TYR 140 PRO 141 LYS 142 ASP 143 ILE 144 ASN 145 VAL 146 LYS 147 TRP 148 LYS 149 ILE 150 ASP 151 GLY 152 SER 153 GLU 154 ARG 155 GLN 156 ASN 157 GLY 158 VAL 159 LEU 160 ASN 161 SER 162 TRP 163 THR 164 ASP 165 GLN 166 ASP 167 SER 168 LYS 169 ASP 170 SER 171 THR 172 TYR 173 SER 174 MET 175 SER 176 SER 177 THR 178 LEU 179 THR 180 LEU 181 THR 182 LYS 183 ASP 184 GLU 185 TYR 186 GLU 187 ARG 188 HIS 189 ASN 190 SER 191 TYR 192 THR 193 CYS 194 GLU 195 ALA 196 THR 197 HIS 198 LYS 199 THR 200 SER 201 THR 202 SER 203 PRO 204 ILE 205 VAL 206 LYS 207 SER 208 PHE 209 ASN 210 ARG 211 ASN 212 GLU 213
Unit 2	VAL 2 LYS 3 LEU 4 VAL 5 GLU 6 SER 7 GLY 8 GLY 9 GLY 10 LEU 11 VAL 12 LYS 13 LEU 14 GLY 15 GLY 16 SER 17 LEU 18 LYS 19 LEU 20 SER 21 CYS 22 ALA 23 ALA 24 SER 25 GLY 26 PHE 27 THR 28 PHE 29 SER 30 SER 31 TYR 32 TYR 33 MET 34 SER 35 TRP 36 VAL 37 ARG 38 GLN 39 THR 40 PRO 41 GLU 42 LYS 43 ARG 44 LEU 45 GLU 46 LEU 47 VAL 48 ALA 49 ALA 50 ILE 51 ASN 52 SER 52A ASN 53 GLY 54 GLY 55 ASN 56 THR 57 TYR 58 TYR 59 PRO 60 ASP 61 THR 62 VAL 63 LYS 64 GLY 65 LEU 66 PHE 67 THR 68 ILE 69 SER 70 ARG 71 ASP 72 ASN 73 ALA 74 LYS 75 ASN 76 THR 77 LEU 78 TYR 79 LEU 80 GLN 81 MET 82 SER 82A ARG 82B LEU 82C LYS 83 SER 84 GLU 85 ASP 86 THR 87 ALA 88 LEU 89 TYR 90 TYR 91 CYS 92 THR 93 ARG 94 LEU 95 TYR 96 GLY 97 ASN 98 TYR 99 VAL 100 ARG 100A ILE 100B HIS 100C THR 100D MET 100E ASP 101 TYR 102 TRP 103 GLY 104 GLN 105 GLY 106 THR 107 SER 108 VAL 109 THR 110 VAL 111 SER 112 SER 113 ALA 114 LYS 115 THR 116 THR 117 PRO 118 PRO 119 SER 120 VAL 121 TYR 122 PRO 123 LEU 124 ALA 125 PRO 126 GLY 127 CYS 128 SER 134 VAL 135 THR 136 LEU 137 GLY 138 CYS 139 LEU 140 VAL 141 LYS 142 GLY 143 TYR 144 PHE 145 PRO 146 GLU 147 SER 148 VAL 149 THR 150 VAL 151 THR 152 TRP 153 ASN 154 SER 155 GLY 156 SER 157 LEU 158 SER 159 SER 160 SER 161 VAL 162 HIS 163 THR 164 PHE 165 PRO 166 ALA 167 LEU 168 LEU 169 GLN 170 SER 171 GLY 172 LEU 173 TYR 174 THR 175 MET 176 SER 177 SER 178 SER 179 VAL 180 THR 181 VAL 182 PRO 183 SER 184 SER 185 THR 186 TRP 187 PRO 188 SER 189 GLU 190 THR 191 VAL 192 THR 193 CYS 194 SER 195 VAL 196 ALA 197 HIS 198 PRO 199 ALA 200 SER 201 SER 202 THR 203 THR 204 VAL 205 ASP 206 LYS 207 LYS 208 LEU 209 GLU 210 PRO 211
Unit 3	ASP 1 ILE 2 VAL 3 LEU 4 THR 5 GLN 6 SER 7 THR 8 SER 9 SER 10 LEU 11 SER 12 ALA 13 SER 14 LEU 15 GLY 16 ASP 17 ARG 18 VAL 19 THR 20 ILE 21 THR 22 CYS 23 ARG 24 ALA 25 SER 26 GLN 27 ASP 28 ILE 29 ARG 30 ASN 31 TYR 32 LEU 33 SER 34 TRP 35 TYR 36 GLN 37 GLN 38 ARG 39 PRO 40 ASP 41 GLY 42 THR 43 VAL 44 LYS 45 LEU 46 LEU 47 ILE 48 TYR 49 TYR 50 THR 51 SER 52 LYS 53 LEU 54 HIS 55 SER 56 GLY 57 VAL 58 PRO 59 SER 60 ARG 61 PHE 62 SER 63 GLY 64 SER 65 GLY 66 SER 67 GLY 68 THR 69 ASP 70 TYR 71 SER 72 LEU 73 THR 74 ILE 75 THR 76 ASN 77 LEU 78 GLU 79 GLN 80 GLU 81 ASP 82 ILE 83 ALA 84 THR 85 TYR 86 PHE 87 CYS 88 GLN 89 GLN 90 GLY 91 LYS 92 THR 93 LEU 94 PRO 95 LEU 95A TYR 96 THR 97 PHE 98 GLY 99 GLY 100 GLY 101 THR 102 LYS 103 LEU 104 GLU 105 ILE 106 LYS 107 ARG 108 ALA 109 ASP 110 ALA 111 ALA 112 PRO 113 THR 114 VAL 115 SER 116 ILE 117 PHE 118 PRO 119 PRO 120 SER 121 SER 122 GLU 123 GLN 124 LEU 125 THR 126 SER 127 GLY 128 GLY 129 ALA 130 SER 131 VAL 132 VAL 133 CYS 134 PHE 135 LEU 136 ASN 137 ASN 138 PHE 139 TYR 140 PRO 141 LYS 142 ASP 143 ILE 144 ASN 145 VAL 146 LYS 147 TRP 148 LYS 149 ILE 150 ASP 151 GLY 152 SER 153 GLU 154 ARG 155 GLN 156 ASN 157 GLY 158 VAL 159 LEU 160 ASN 161 SER 162 TRP 163 THR 164 ASP 165 GLN 166 ASP 167 SER 168 LYS 169 ASP 170 SER 171 THR 172 TYR 173 SER 174 MET 175 SER 176 SER 177 THR 178 LEU 179 THR 180 LEU 181 THR 182 LYS 183 ASP 184 GLU 185 TYR 186 GLU 187 ARG 188 HIS 189 ASN 190 SER 191 TYR 192 THR 193 CYS 194 GLU 195 ALA 196 THR 197 HIS 198 LYS 199 THR 200 SER 201 THR 202 SER 203 PRO 204 ILE 205 VAL 206 LYS 207 SER 208 PHE 209 ASN 210 ARG 211 ASN 212 GLU 213
Unit 4	VAL 2 LYS 3 LEU 4 VAL 5 GLU 6 SER 7 GLY 8 GLY 9 GLY 10 LEU 11 VAL 12 LYS 13 LEU 14 GLY 15 GLY 16 SER 17 LEU 18 LYS 19 LEU 20 SER 21 CYS 22 ALA 23 ALA 24 SER 25 GLY 26 PHE 27 THR 28 PHE 29 SER 30 SER 31 TYR 32 TYR 33 MET 34 SER 35 TRP 36 VAL 37 ARG 38 GLN 39 THR 40 PRO 41 GLU 42 LYS 43 ARG 44 LEU 45 GLU 46 LEU 47 VAL 48 ALA 49 ALA 50 ILE 51 ASN 52 SER 52A ASN 53 GLY 54 GLY 55 ASN 56 THR 57 TYR 58 TYR 59 PRO 60 ASP 61 THR 62 VAL 63 LYS 64 GLY 65 LEU 66 PHE 67 THR 68 ILE 69 SER 70 ARG 71 ASP 72 ASN 73 ALA 74 LYS 75 ASN 76 THR 77 LEU 78 TYR 79 LEU 80 GLN 81 MET 82 SER 82A ARG 82B LEU 82C LYS 83 SER 84 GLU 85 ASP 86 THR 87 ALA 88 LEU 89 TYR 90 TYR 91 CYS 92 THR 93 ARG 94 LEU 95 TYR 96 GLY 97 ASN 98 TYR 99 VAL 100 ARG 100A ILE 100B HIS 100C THR 100D MET 100E ASP 101 TYR 102 TRP 103 GLY 104 GLN 105 GLY 106 THR 107 SER 108 VAL 109 THR 110 VAL 111 SER 112 SER 113 ALA 114 LYS 115 THR 116 THR 117 PRO 118 PRO 119 SER 120 VAL 121 TYR 122 PRO 123 LEU 124 ALA 125 PRO 126 GLY 132 SER 133 SER 134 VAL 135 THR 136 LEU 137 GLY 138 CYS 139 LEU 140 VAL 141 LYS 142 GLY 143 TYR 144 PHE 145 PRO 146 GLU 147 SER 148 VAL 149 THR 150 VAL 151 THR 152 TRP 153 ASN 154 SER 155 SER 160 SER 161 VAL 162 HIS 163 THR 164 PHE 165 PRO 166 ALA 167 LEU 168 LEU 169 GLN 170 SER 171 GLY 172 LEU 173 TYR 174 THR 175 MET 176 SER 177 SER 178 SER 179 VAL 180 THR 181 VAL 182 PRO 183 SER 184 SER 185 THR 186 TRP 187 PRO 188 SER 189 GLU 190 THR 191 VAL 192 THR 193 CYS 194 SER 195 VAL 196 ALA 197 HIS 198 PRO 199 ALA 200 SER 201 SER 202 THR 203 THR 204 VAL 205 ASP 206 LYS 207 LYS 208 LEU 209

Ligands

Unit 5

TRS 301