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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF THE RPN8-RPN11 MPN DOMAIN HETERODIMER, FORM II
Keywords 26S PROTEASOME, ISOPEPTIDASE ACTIVITY, REGULATORY PARTICLE, UBIQUITIN, HYDROLASE, PROTEIN BINDING
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4OCN     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   26S PROTEASOME REGULATORY SUBUNIT RPN8  A 174 1374 0
2  Protein   26S PROTEASOME REGULATORY SUBUNIT RPN11  B 165 1296 0
3  Protein   NB1  C 122 955 0
4  Protein   26S PROTEASOME REGULATORY SUBUNIT RPN8  D 172 1360 0
5  Protein   26S PROTEASOME REGULATORY SUBUNIT RPN11  E 162 1265 0
6  Protein   NB1  F 123 956 0
7 Water     135 0 135
total       1053 7206 135

Proteins
Unit 1 LEU3 GLN4 HIS5 GLU6 LYS7 VAL8 THR9 ILE10 ALA11 PRO12 LEU13 VAL14 LEU15 LEU16 SER17 ALA18 LEU19 ASP20 HIS21 TYR22 GLU23 ARG24 THR25 GLN26 THR27 LYS28 GLU29 ASN30 LYS31 ARG32 CYS33 VAL34 GLY35 VAL36 ILE37 LEU38 GLY39 ASP40 ALA41 ASN42 SER43 SER44 THR45 ILE46 ARG47 VAL48 THR49 ASN50 SER51 PHE52 ALA53 LEU54 PRO55 PHE56 GLU57 GLU58 ASP59 GLU60 LYS61 ASN62 SER63 ASP64 VAL65 TRP66 PHE67 LEU68 ASP69 HIS70 ASN71 TYR72 ILE73 GLU74 ASN75 MET76 ASN77 GLU78 MET79 CYS80 LYS81 LYS82 ILE83 ASN84 ALA85 LYS86 GLU87 LYS88 LEU89 ILE90 GLY91 TRP92 TYR93 HIS94 SER95 GLY96 PRO97 LYS98 LEU99 ARG100 ALA101 SER102 ASP103 LEU104 LYS105 ILE106 ASN107 GLU108 LEU109 PHE110 LYS111 LYS112 TYR113 THR114 GLN115 ASN116 ASN117 PRO118 LEU119 LEU120 LEU121 ILE122 VAL123 ASP124 VAL125 LYS126 GLN127 GLN128 GLY129 VAL130 GLY131 LEU132 PRO133 THR134 ASP135 ALA136 TYR137 VAL138 ALA139 ILE140 GLU141 GLN142 VAL143 LYS144 ASP145 ASP146 GLY147 THR148 SER149 THR150 GLU151 LYS152 THR153 PHE154 LEU155 HIS156 LEU157 PRO158 CYS159 THR160 ILE161 GLU162 ALA163 GLU164 GLU165 ALA166 GLU167 GLU168 ILE169 GLY170 VAL171 GLU172 HIS173 LEU174 LEU175 ARG176
Unit 2 THR23 LYS24 GLU25 THR26 VAL27 TYR28 ILE29 SER30 SER31 ILE32 ALA33 LEU34 LEU35 LYS36 MET37 LEU38 LYS39 HIS40 GLY41 ARG42 ALA43 GLY44 VAL45 PRO46 MET47 GLU48 VAL49 MET50 GLY51 LEU52 MET53 LEU54 GLY55 GLU56 PHE57 VAL58 ASP59 ASP60 TYR61 THR62 VAL63 ASN64 VAL65 VAL66 ASP67 VAL68 PHE69 ALA70 MET71 PRO72 GLN73 SER74 GLY75 VAL83 ASP84 ASP85 VAL86 PHE87 GLN88 ALA89 LYS90 MET91 MET92 ASP93 MET94 LEU95 LYS96 GLN97 THR98 GLY99 ARG100 ASP101 GLN102 MET103 VAL104 VAL105 GLY106 TRP107 TYR108 HIS109 SER110 HIS111 PRO112 GLY113 PHE114 GLY115 CYS116 TRP117 LEU118 SER119 SER120 VAL121 ASP122 VAL123 ASN124 THR125 GLN126 LYS127 SER128 PHE129 GLU130 GLN131 LEU132 ASN133 SER134 ARG135 ALA136 VAL137 ALA138 VAL139 VAL140 VAL141 ASP142 PRO143 ILE144 GLN145 SER146 VAL147 LYS148 GLY149 LYS150 VAL151 VAL152 ILE153 ASP154 ALA155 PHE156 ARG157 LEU158 ILE159 ASP160 THR161 GLY162 ALA163 LEU164 ILE165 ASN166 ASN167 LEU168 LEU192 ASN193 ARG194 HIS195 TYR196 TYR197 SER198 LEU199 ASN200 ILE201 ASP202 TYR203 HIS204 LYS205 THR206 ALA207 LYS208 GLU209 THR210 LYS211 MET212 LEU213 MET214 ASN215 LEU216 HIS217
Unit 3 VAL3 GLN4 LEU5 GLN6 GLU7 SER8 GLY9 GLY10 GLY11 LEU12 VAL13 PRO14 ALA15 GLY16 GLY17 SER18 LEU19 ARG20 LEU21 SER22 CYS23 VAL24 ASP25 SER26 GLY27 ARG28 SER32 THR33 VAL34 MET35 ALA36 TRP37 PHE38 ARG39 GLN40 ALA41 PRO42 GLY43 LYS44 GLU45 ARG46 GLU47 PHE48 VAL49 ALA50 THR51 ILE52 ARG53 TRP54 SER55 GLY56 GLY57 ASN58 THR59 TYR60 TYR61 ALA62 ASP63 SER64 VAL65 LYS66 GLY67 ARG68 PHE69 THR70 ILE71 SER72 ARG73 ASP74 ASN75 ALA76 ARG77 ASN78 THR79 VAL80 TYR81 LEU82 GLN83 MET84 ASN85 SER86 LEU87 LYS88 PRO89 GLU90 ASP91 THR92 ALA93 VAL94 TYR95 TYR96 CYS97 ALA98 GLY99 GLY100 THR101 TYR102 TYR103 GLY104 THR105 LEU106 SER107 TYR108 LYS109 TYR110 ASP111 PHE112 TRP113 GLY114 ARG115 GLY116 THR117 GLN118 VAL119 THR120 VAL121 SER122 SER123 HIS124 HIS125 HIS126 HIS127
Unit 4 HIS5 GLU6 LYS7 VAL8 THR9 ILE10 ALA11 PRO12 LEU13 VAL14 LEU15 LEU16 SER17 ALA18 LEU19 ASP20 HIS21 TYR22 GLU23 ARG24 THR25 GLN26 THR27 LYS28 GLU29 ASN30 LYS31 ARG32 CYS33 VAL34 GLY35 VAL36 ILE37 LEU38 GLY39 ASP40 ALA41 ASN42 SER43 SER44 THR45 ILE46 ARG47 VAL48 THR49 ASN50 SER51 PHE52 ALA53 LEU54 PRO55 PHE56 GLU57 GLU58 ASP59 GLU60 LYS61 ASN62 SER63 ASP64 VAL65 TRP66 PHE67 LEU68 ASP69 HIS70 ASN71 TYR72 ILE73 GLU74 ASN75 MET76 ASN77 GLU78 MET79 CYS80 LYS81 LYS82 ILE83 ASN84 ALA85 LYS86 GLU87 LYS88 LEU89 ILE90 GLY91 TRP92 TYR93 HIS94 SER95 GLY96 PRO97 LYS98 LEU99 ARG100 ALA101 SER102 ASP103 LEU104 LYS105 ILE106 ASN107 GLU108 LEU109 PHE110 LYS111 LYS112 TYR113 THR114 GLN115 ASN116 ASN117 PRO118 LEU119 LEU120 LEU121 ILE122 VAL123 ASP124 VAL125 LYS126 GLN127 GLN128 GLY129 VAL130 GLY131 LEU132 PRO133 THR134 ASP135 ALA136 TYR137 VAL138 ALA139 ILE140 GLU141 GLN142 VAL143 LYS144 ASP145 ASP146 GLY147 THR148 SER149 THR150 GLU151 LYS152 THR153 PHE154 LEU155 HIS156 LEU157 PRO158 CYS159 THR160 ILE161 GLU162 ALA163 GLU164 GLU165 ALA166 GLU167 GLU168 ILE169 GLY170 VAL171 GLU172 HIS173 LEU174 LEU175 ARG176
Unit 5 ASP22 THR23 LYS24 GLU25 THR26 VAL27 TYR28 ILE29 SER30 SER31 ILE32 ALA33 LEU34 LEU35 LYS36 MET37 LEU38 LYS39 HIS40 GLY41 ARG42 ALA43 GLY44 VAL45 PRO46 MET47 GLU48 VAL49 MET50 GLY51 LEU52 MET53 LEU54 GLY55 GLU56 PHE57 VAL58 ASP59 ASP60 TYR61 THR62 VAL63 ASN64 VAL65 VAL66 ASP67 VAL68 PHE69 ALA70 MET71 PRO72 GLN73 SER74 GLY75 THR76 VAL80 GLU81 ALA82 VAL83 ASP84 ASP85 VAL86 PHE87 GLN88 ALA89 LYS90 MET91 MET92 ASP93 MET94 LEU95 LYS96 GLN97 THR98 GLY99 ARG100 ASP101 GLN102 MET103 VAL104 VAL105 GLY106 TRP107 TYR108 HIS109 SER110 HIS111 PRO112 GLY113 PHE114 GLY115 CYS116 TRP117 LEU118 SER119 SER120 VAL121 ASP122 VAL123 ASN124 THR125 GLN126 LYS127 SER128 PHE129 GLU130 GLN131 LEU132 ASN133 SER134 ARG135 ALA136 VAL137 ALA138 VAL139 VAL140 VAL141 ASP142 PRO143 ILE144 GLN145 SER146 VAL147 LYS148 GLY149 LYS150 VAL151 VAL152 ILE153 ASP154 ALA155 PHE156 ARG157 LEU158 ILE159 ASP160 LEU192 ASN193 ARG194 HIS195 TYR196 TYR197 SER198 LEU199 ASN200 ILE201 ASP202 TYR203 HIS204 LYS205 THR206 ALA207 LYS208 GLU209 THR210 LYS211 MET212 LEU213 MET214 ASN215 LEU216 HIS217
Unit 6 VAL3 GLN4 LEU5 GLN6 GLU7 SER8 GLY9 GLY10 GLY11 LEU12 VAL13 PRO14 ALA15 GLY16 GLY17 SER18 LEU19 ARG20 LEU21 SER22 CYS23 VAL24 ASP25 SER26 GLY27 ARG28 PHE30 SER31 SER32 THR33 VAL34 MET35 ALA36 TRP37 PHE38 ARG39 GLN40 ALA41 PRO42 GLY43 LYS44 GLU45 ARG46 GLU47 PHE48 VAL49 ALA50 THR51 ILE52 ARG53 TRP54 SER55 GLY56 GLY57 ASN58 THR59 TYR60 TYR61 ALA62 ASP63 SER64 VAL65 LYS66 GLY67 ARG68 PHE69 THR70 ILE71 SER72 ARG73 ASP74 ASN75 ALA76 ARG77 ASN78 THR79 VAL80 TYR81 LEU82 GLN83 MET84 ASN85 SER86 LEU87 LYS88 PRO89 GLU90 ASP91 THR92 ALA93 VAL94 TYR95 TYR96 CYS97 ALA98 GLY99 GLY100 THR101 TYR102 TYR103 GLY104 THR105 LEU106 SER107 TYR108 LYS109 TYR110 ASP111 PHE112 TRP113 GLY114 ARG115 GLY116 THR117 GLN118 VAL119 THR120 VAL121 SER122 SER123 HIS124 HIS125 HIS126

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany