4OCL - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF THE RPN8-RPN11 MPN DOMAIN HETERODIMER, FORM IA
• Keywords: 26S PROTEASOME, ISOPEPTIDASE ACTIVITY, REGULATORY PARTICLE, UBIQUITIN, HYDROLASE, PROTEIN BINDING
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	4OCL	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	26S PROTEASOME REGULATORY SUBUNIT RPN8	A	163	1252	0
2	Protein	26S PROTEASOME REGULATORY SUBUNIT RPN11	B	181	1396	0
3	Protein	NB1	C	125	973	0
4	Protein	26S PROTEASOME REGULATORY SUBUNIT RPN8	D	164	1265	0
5	Protein	26S PROTEASOME REGULATORY SUBUNIT RPN11	E	184	1402	0
6	Protein	NB1	F	125	975	0
7	Ligand	26S PROTEASOME REGULATORY SUBUNIT RPN11	B	1	0	1
8	Ligand	26S PROTEASOME REGULATORY SUBUNIT RPN11	E	1	0	1
9	Water			94	0	94
total				1038	7263	96

Proteins

Unit 1	HIS 5 GLU 6 LYS 7 VAL 8 THR 9 ILE 10 ALA 11 PRO 12 LEU 13 VAL 14 LEU 15 LEU 16 SER 17 ALA 18 LEU 19 ASP 20 HIS 21 TYR 22 GLU 23 ARG 24 THR 25 GLN 26 THR 27 LYS 28 GLU 29 ASN 30 LYS 31 ARG 32 CYS 33 VAL 34 GLY 35 VAL 36 ILE 37 LEU 38 GLY 39 ASP 40 ALA 41 ASN 42 SER 43 SER 44 THR 45 ILE 46 ARG 47 VAL 48 THR 49 ASN 50 SER 51 PHE 52 ALA 53 LEU 54 PRO 55 PHE 56 GLU 57 GLU 58 ASP 59 GLU 60 LYS 61 ASN 62 SER 63 ASP 64 VAL 65 TRP 66 PHE 67 LEU 68 ASP 69 HIS 70 ASN 71 TYR 72 ILE 73 GLU 74 ASN 75 MET 76 ASN 77 GLU 78 MET 79 CYS 80 LYS 81 LYS 82 ILE 83 ASN 84 ALA 85 LYS 86 GLU 87 LYS 88 LEU 89 ILE 90 GLY 91 TRP 92 TYR 93 HIS 94 SER 95 GLY 96 PRO 97 LYS 98 LEU 99 ARG 100 ALA 101 SER 102 ASP 103 LEU 104 LYS 105 ILE 106 ASN 107 GLU 108 LEU 109 PHE 110 LYS 111 LYS 112 TYR 113 THR 114 GLN 115 ASN 116 ASN 117 PRO 118 LEU 119 LEU 120 LEU 121 ILE 122 VAL 123 ASP 124 VAL 125 LYS 126 GLN 127 GLN 128 GLY 129 VAL 130 GLY 131 LEU 132 PRO 133 THR 134 ASP 135 ALA 136 TYR 137 VAL 138 ALA 139 ILE 140 GLU 141 GLN 142 LYS 152 THR 153 PHE 154 LEU 155 HIS 156 LEU 157 PRO 158 CYS 159 THR 160 ILE 161 GLU 162 ALA 163 GLU 164 GLU 165 ALA 166 GLU 167 GLU 168 ILE 169 GLY 170 VAL 171 GLU 172 HIS 173 LEU 174 LEU 175 ARG 176
Unit 2	THR 23 LYS 24 GLU 25 THR 26 VAL 27 TYR 28 ILE 29 SER 30 SER 31 ILE 32 ALA 33 LEU 34 LEU 35 LYS 36 MET 37 LEU 38 LYS 39 HIS 40 GLY 41 ARG 42 ALA 43 GLY 44 VAL 45 PRO 46 MET 47 GLU 48 VAL 49 MET 50 GLY 51 LEU 52 MET 53 LEU 54 GLY 55 GLU 56 PHE 57 VAL 58 ASP 59 ASP 60 TYR 61 THR 62 VAL 63 ASN 64 VAL 65 VAL 66 ASP 67 VAL 68 PHE 69 ALA 70 MET 71 PRO 72 GLN 73 SER 74 GLY 75 THR 76 GLY 77 VAL 78 SER 79 VAL 80 GLU 81 ALA 82 VAL 83 ASP 84 ASP 85 VAL 86 PHE 87 GLN 88 ALA 89 LYS 90 MET 91 MET 92 ASP 93 MET 94 LEU 95 LYS 96 GLN 97 THR 98 GLY 99 ARG 100 ASP 101 GLN 102 MET 103 VAL 104 VAL 105 GLY 106 TRP 107 TYR 108 HIS 109 SER 110 HIS 111 PRO 112 GLY 113 PHE 114 GLY 115 CYS 116 TRP 117 LEU 118 SER 119 SER 120 VAL 121 ASP 122 VAL 123 ASN 124 THR 125 GLN 126 LYS 127 SER 128 PHE 129 GLU 130 GLN 131 LEU 132 ASN 133 SER 134 ARG 135 ALA 136 VAL 137 ALA 138 VAL 139 VAL 140 VAL 141 ASP 142 PRO 143 ILE 144 GLN 145 SER 146 VAL 147 LYS 148 GLY 149 LYS 150 VAL 151 VAL 152 ILE 153 ASP 154 ALA 155 PHE 156 ARG 157 LEU 158 ILE 159 ASP 160 THR 161 GLY 162 ALA 163 GLY 178 LEU 179 LEU 180 ASN 181 LYS 182 ALA 183 ASN 184 ILE 185 GLN 186 ALA 187 LEU 188 ILE 189 HIS 190 GLY 191 LEU 192 ASN 193 ARG 194 HIS 195 TYR 196 TYR 197 SER 198 LEU 199 ASN 200 ILE 201 ASP 202 TYR 203 HIS 204 LYS 205 THR 206 ALA 207 LYS 208 GLU 209 THR 210 LYS 211 MET 212 LEU 213 MET 214 ASN 215 LEU 216 HIS 217
Unit 3	VAL 3 GLN 4 LEU 5 GLN 6 GLU 7 SER 8 GLY 9 GLY 10 GLY 11 LEU 12 VAL 13 PRO 14 ALA 15 GLY 16 GLY 17 SER 18 LEU 19 ARG 20 LEU 21 SER 22 CYS 23 VAL 24 ASP 25 SER 26 GLY 27 ARG 28 THR 29 PHE 30 SER 31 SER 32 THR 33 VAL 34 MET 35 ALA 36 TRP 37 PHE 38 ARG 39 GLN 40 ALA 41 PRO 42 GLY 43 LYS 44 GLU 45 ARG 46 GLU 47 PHE 48 VAL 49 ALA 50 THR 51 ILE 52 ARG 53 TRP 54 SER 55 GLY 56 GLY 57 ASN 58 THR 59 TYR 60 TYR 61 ALA 62 ASP 63 SER 64 VAL 65 LYS 66 GLY 67 ARG 68 PHE 69 THR 70 ILE 71 SER 72 ARG 73 ASP 74 ASN 75 ALA 76 ARG 77 ASN 78 THR 79 VAL 80 TYR 81 LEU 82 GLN 83 MET 84 ASN 85 SER 86 LEU 87 LYS 88 PRO 89 GLU 90 ASP 91 THR 92 ALA 93 VAL 94 TYR 95 TYR 96 CYS 97 ALA 98 GLY 99 GLY 100 THR 101 TYR 102 TYR 103 GLY 104 THR 105 LEU 106 SER 107 TYR 108 LYS 109 TYR 110 ASP 111 PHE 112 TRP 113 GLY 114 ARG 115 GLY 116 THR 117 GLN 118 VAL 119 THR 120 VAL 121 SER 122 SER 123 HIS 124 HIS 125 HIS 126 HIS 127
Unit 4	HIS 5 GLU 6 LYS 7 VAL 8 THR 9 ILE 10 ALA 11 PRO 12 LEU 13 VAL 14 LEU 15 LEU 16 SER 17 ALA 18 LEU 19 ASP 20 HIS 21 TYR 22 GLU 23 ARG 24 THR 25 GLN 26 THR 27 LYS 28 GLU 29 ASN 30 LYS 31 ARG 32 CYS 33 VAL 34 GLY 35 VAL 36 ILE 37 LEU 38 GLY 39 ASP 40 ALA 41 ASN 42 SER 43 SER 44 THR 45 ILE 46 ARG 47 VAL 48 THR 49 ASN 50 SER 51 PHE 52 ALA 53 LEU 54 PRO 55 PHE 56 GLU 57 GLU 58 ASP 59 GLU 60 LYS 61 ASN 62 SER 63 ASP 64 VAL 65 TRP 66 PHE 67 LEU 68 ASP 69 HIS 70 ASN 71 TYR 72 ILE 73 GLU 74 ASN 75 MET 76 ASN 77 GLU 78 MET 79 CYS 80 LYS 81 LYS 82 ILE 83 ASN 84 ALA 85 LYS 86 GLU 87 LYS 88 LEU 89 ILE 90 GLY 91 TRP 92 TYR 93 HIS 94 SER 95 GLY 96 PRO 97 LYS 98 LEU 99 ARG 100 ALA 101 SER 102 ASP 103 LEU 104 LYS 105 ILE 106 ASN 107 GLU 108 LEU 109 PHE 110 LYS 111 LYS 112 TYR 113 THR 114 GLN 115 ASN 116 ASN 117 PRO 118 LEU 119 LEU 120 LEU 121 ILE 122 VAL 123 ASP 124 VAL 125 LYS 126 GLN 127 GLN 128 GLY 129 VAL 130 GLY 131 LEU 132 PRO 133 THR 134 ASP 135 ALA 136 TYR 137 VAL 138 ALA 139 ILE 140 GLU 141 GLN 142 GLU 151 LYS 152 THR 153 PHE 154 LEU 155 HIS 156 LEU 157 PRO 158 CYS 159 THR 160 ILE 161 GLU 162 ALA 163 GLU 164 GLU 165 ALA 166 GLU 167 GLU 168 ILE 169 GLY 170 VAL 171 GLU 172 HIS 173 LEU 174 LEU 175 ARG 176
Unit 5	THR 23 LYS 24 GLU 25 THR 26 VAL 27 TYR 28 ILE 29 SER 30 SER 31 ILE 32 ALA 33 LEU 34 LEU 35 LYS 36 MET 37 LEU 38 LYS 39 HIS 40 GLY 41 ARG 42 ALA 43 GLY 44 VAL 45 PRO 46 MET 47 GLU 48 VAL 49 MET 50 GLY 51 LEU 52 MET 53 LEU 54 GLY 55 GLU 56 PHE 57 VAL 58 ASP 59 ASP 60 TYR 61 THR 62 VAL 63 ASN 64 VAL 65 VAL 66 ASP 67 VAL 68 PHE 69 ALA 70 MET 71 PRO 72 GLN 73 SER 74 GLY 75 THR 76 GLY 77 VAL 78 SER 79 VAL 80 GLU 81 ALA 82 VAL 83 ASP 84 ASP 85 VAL 86 PHE 87 GLN 88 ALA 89 LYS 90 MET 91 MET 92 ASP 93 MET 94 LEU 95 LYS 96 GLN 97 THR 98 GLY 99 ARG 100 ASP 101 GLN 102 MET 103 VAL 104 VAL 105 GLY 106 TRP 107 TYR 108 HIS 109 SER 110 HIS 111 PRO 112 GLY 113 PHE 114 GLY 115 CYS 116 TRP 117 LEU 118 SER 119 SER 120 VAL 121 ASP 122 VAL 123 ASN 124 THR 125 GLN 126 LYS 127 SER 128 PHE 129 GLU 130 GLN 131 LEU 132 ASN 133 SER 134 ARG 135 ALA 136 VAL 137 ALA 138 VAL 139 VAL 140 VAL 141 ASP 142 PRO 143 ILE 144 GLN 145 SER 146 VAL 147 LYS 148 GLY 149 LYS 150 VAL 151 VAL 152 ILE 153 ASP 154 ALA 155 PHE 156 ARG 157 LEU 158 ILE 159 ASP 160 THR 161 GLY 162 ALA 163 LEU 164 ILE 165 ASN 166 ASN 167 LEU 168 LEU 180 ASN 181 LYS 182 ALA 183 ASN 184 ILE 185 GLN 186 ALA 187 LEU 188 ILE 189 HIS 190 GLY 191 LEU 192 ASN 193 ARG 194 HIS 195 TYR 196 TYR 197 SER 198 LEU 199 ASN 200 ILE 201 ASP 202 TYR 203 HIS 204 LYS 205 THR 206 ALA 207 LYS 208 GLU 209 THR 210 LYS 211 MET 212 LEU 213 MET 214 ASN 215 LEU 216 HIS 217
Unit 6	VAL 3 GLN 4 LEU 5 GLN 6 GLU 7 SER 8 GLY 9 GLY 10 GLY 11 LEU 12 VAL 13 PRO 14 ALA 15 GLY 16 GLY 17 SER 18 LEU 19 ARG 20 LEU 21 SER 22 CYS 23 VAL 24 ASP 25 SER 26 GLY 27 ARG 28 THR 29 PHE 30 SER 31 SER 32 THR 33 VAL 34 MET 35 ALA 36 TRP 37 PHE 38 ARG 39 GLN 40 ALA 41 PRO 42 GLY 43 LYS 44 GLU 45 ARG 46 GLU 47 PHE 48 VAL 49 ALA 50 THR 51 ILE 52 ARG 53 TRP 54 SER 55 GLY 56 GLY 57 ASN 58 THR 59 TYR 60 TYR 61 ALA 62 ASP 63 SER 64 VAL 65 LYS 66 GLY 67 ARG 68 PHE 69 THR 70 ILE 71 SER 72 ARG 73 ASP 74 ASN 75 ALA 76 ARG 77 ASN 78 THR 79 VAL 80 TYR 81 LEU 82 GLN 83 MET 84 ASN 85 SER 86 LEU 87 LYS 88 PRO 89 GLU 90 ASP 91 THR 92 ALA 93 VAL 94 TYR 95 TYR 96 CYS 97 ALA 98 GLY 99 GLY 100 THR 101 TYR 102 TYR 103 GLY 104 THR 105 LEU 106 SER 107 TYR 108 LYS 109 TYR 110 ASP 111 PHE 112 TRP 113 GLY 114 ARG 115 GLY 116 THR 117 GLN 118 VAL 119 THR 120 VAL 121 SER 122 SER 123 HIS 124 HIS 125 HIS 126 HIS 127

Ligands

Unit 7	ZN 401
Unit 8	ZN 401