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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE OF CATHEPSIN D WITH INHIBITOR 2-(3,4-DIMETHOXYPHEN (4-METHYLBENZYL)CARBAMIMIDOYL]ACETAMIDE
Keywords LYSOSOMAL ASPARTIC PROTEASE, HYDROLASE-HYDROLASE INHIBITOR C
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   4OBZ     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   CATHEPSIN D LIGHT CHAIN  A 97 753 0
2  Protein   CATHEPSIN D HEAVY CHAIN  B 240 1840 0
3  Protein   CATHEPSIN D LIGHT CHAIN  C 103 792 0
4  Protein   CATHEPSIN D HEAVY CHAIN  D 237 1817 0
5  Ligand    E 2 0 28
6  Ligand   CATHEPSIN D LIGHT CHAIN  A 1 0 14
7  Ligand   CATHEPSIN D HEAVY CHAIN  B 1 0 25
8 Water     38 0 38
total       719 5202 105
Proteins
Unit 1 PRO2 ILE3 PRO4 GLU5 VAL6 LEU7 LYS8 ASN9 TYR10 MET11 ASP12 ALA13 GLN14 TYR15 TYR16 GLY17 GLU18 ILE19 GLY20 ILE21 GLY22 THR23 PRO24 PRO25 GLN26 CYS27 PHE28 THR29 VAL30 VAL31 PHE32 ASP33 THR34 GLY35 SER36 SER37 ASN38 LEU39 TRP40 VAL41 PRO42 SER43 ILE44 HIS45 CYS46 LYS47 LEU48 LEU49 ASP50 ILE51 ALA52 CYS53 TRP54 ILE55 HIS56 HIS57 LYS58 TYR59 ASN60 SER61 ASP62 LYS63 SER64 SER65 THR66 TYR67 VAL68 LYS69 ASN70 GLY71 THR72 SER73 PHE74 ASP75 ILE76 HIS77 TYR78 GLY79 SER80 GLY81 SER82 LEU83 SER84 GLY85 TYR86 LEU87 SER88 GLN89 ASP90 THR91 VAL92 SER93 VAL94 PRO95 CYS96 GLN97 SER98
Unit 2 GLY107 VAL108 LYS109 VAL110 GLU111 ARG112 GLN113 VAL114 PHE115 GLY116 GLU117 ALA118 THR119 LYS120 GLN121 PRO122 GLY123 ILE124 THR125 PHE126 ILE127 ALA128 ALA129 LYS130 PHE131 ASP132 GLY133 ILE134 LEU135 GLY136 MET137 ALA138 TYR139 PRO140 ARG141 ILE142 SER143 VAL144 ASN145 ASN146 VAL147 LEU148 PRO149 VAL150 PHE151 ASP152 ASN153 LEU154 MET155 GLN156 GLN157 LYS158 LEU159 VAL160 ASP161 GLN162 ASN163 ILE164 PHE165 SER166 PHE167 TYR168 LEU169 SER170 ARG171 ASP172 PRO173 ASP174 ALA175 GLN176 PRO177 GLY178 GLY179 GLU180 LEU181 MET182 LEU183 GLY184 GLY185 THR186 ASP187 SER188 LYS189 TYR190 TYR191 LYS192 GLY193 SER194 LEU195 SER196 TYR197 LEU198 ASN199 VAL200 THR201 ARG202 LYS203 ALA204 TYR205 TRP206 GLN207 VAL208 HIS209 LEU210 ASP211 GLN212 VAL213 GLU214 VAL215 ALA216 SER217 GLY218 LEU219 THR220 LEU221 CYS222 LYS223 GLU224 GLY225 CYS226 GLU227 ALA228 ILE229 VAL230 ASP231 THR232 GLY233 THR234 SER235 LEU236 MET237 VAL238 GLY239 PRO240 VAL241 ASP242 GLU243 VAL244 ARG245 GLU246 LEU247 GLN248 LYS249 ALA250 ILE251 GLY252 ALA253 VAL254 PRO255 LEU256 ILE257 GLN258 GLY259 GLU260 TYR261 MET262 ILE263 PRO264 CYS265 GLU266 LYS267 VAL268 SER269 THR270 LEU271 PRO272 ALA273 ILE274 THR275 LEU276 LYS277 LEU278 GLY279 GLY280 LYS281 GLY282 TYR283 LYS284 LEU285 SER286 PRO287 GLU288 ASP289 TYR290 THR291 LEU292 LYS293 VAL294 SER295 GLN296 ALA297 GLY298 LYS299 THR300 LEU301 CYS302 LEU303 SER304 GLY305 PHE306 MET307 GLY308 MET309 ASP310 ILE311 PRO312 PRO313 PRO314 SER315 GLY316 PRO317 LEU318 TRP319 ILE320 LEU321 GLY322 ASP323 VAL324 PHE325 ILE326 GLY327 ARG328 TYR329 TYR330 THR331 VAL332 PHE333 ASP334 ARG335 ASP336 ASN337 ASN338 ARG339 VAL340 GLY341 PHE342 ALA343 GLU344 ALA345 ALA346
Unit 3 PRO-4 ALA-3 VAL-2 THR-1 GLU0 GLY1 PRO2 ILE3 PRO4 GLU5 VAL6 LEU7 LYS8 ASN9 TYR10 MET11 ASP12 ALA13 GLN14 TYR15 TYR16 GLY17 GLU18 ILE19 GLY20 ILE21 GLY22 THR23 PRO24 PRO25 GLN26 CYS27 PHE28 THR29 VAL30 VAL31 PHE32 ASP33 THR34 GLY35 SER36 SER37 ASN38 LEU39 TRP40 VAL41 PRO42 SER43 ILE44 HIS45 CYS46 LYS47 LEU48 LEU49 ASP50 ILE51 ALA52 CYS53 TRP54 ILE55 HIS56 HIS57 LYS58 TYR59 ASN60 SER61 ASP62 LYS63 SER64 SER65 THR66 TYR67 VAL68 LYS69 ASN70 GLY71 THR72 SER73 PHE74 ASP75 ILE76 HIS77 TYR78 GLY79 SER80 GLY81 SER82 LEU83 SER84 GLY85 TYR86 LEU87 SER88 GLN89 ASP90 THR91 VAL92 SER93 VAL94 PRO95 CYS96 GLN97 SER98
Unit 4 GLY106 GLY107 VAL108 LYS109 VAL110 GLU111 ARG112 GLN113 VAL114 PHE115 GLY116 GLU117 ALA118 THR119 LYS120 GLN121 PRO122 GLY123 ILE124 THR125 PHE126 ILE127 ALA128 ALA129 LYS130 PHE131 ASP132 GLY133 ILE134 LEU135 GLY136 MET137 ALA138 TYR139 PRO140 ARG141 ILE142 SER143 VAL144 ASN145 ASN146 VAL147 LEU148 PRO149 VAL150 PHE151 ASP152 ASN153 LEU154 MET155 GLN156 GLN157 LYS158 LEU159 VAL160 ASP161 GLN162 ASN163 ILE164 PHE165 SER166 PHE167 TYR168 LEU169 SER170 ARG171 ASP172 PRO173 ASP174 ALA175 GLN176 PRO177 GLY178 GLY179 GLU180 LEU181 MET182 LEU183 GLY184 GLY185 THR186 ASP187 SER188 LYS189 TYR190 TYR191 LYS192 GLY193 SER194 LEU195 SER196 TYR197 LEU198 ASN199 VAL200 THR201 ARG202 LYS203 ALA204 TYR205 TRP206 GLN207 VAL208 HIS209 LEU210 ASP211 GLN212 VAL213 GLU214 VAL215 ALA216 SER217 GLY218 LEU219 THR220 LEU221 CYS222 LYS223 GLU224 GLY225 CYS226 GLU227 ALA228 ILE229 VAL230 ASP231 THR232 GLY233 THR234 SER235 LEU236 MET237 VAL238 GLY239 PRO240 VAL241 ASP242 GLU243 VAL244 ARG245 GLU246 LEU247 GLN248 LYS249 ALA250 ILE251 GLY252 ALA253 VAL254 PRO255 LEU256 ILE257 GLN258 GLY259 GLU260 TYR261 MET262 ILE263 PRO264 CYS265 GLU266 LYS267 VAL268 SER269 THR270 LEU271 PRO272 ALA273 ILE274 THR275 LEU276 LYS277 LEU278 GLY279 GLY280 LYS281 GLY282 TYR283 LYS284 LEU285 SER286 PRO287 GLU288 ASP289 TYR290 THR291 LEU292 LYS293 VAL294 SER295 THR300 LEU301 CYS302 LEU303 SER304 GLY305 PHE306 MET307 GLY308 MET309 ASP310 ILE311 PRO312 PRO313 PRO314 SER315 GLY316 PRO317 LEU318 TRP319 ILE320 LEU321 GLY322 ASP323 VAL324 PHE325 ILE326 GLY327 ARG328 TYR329 TYR330 THR331 VAL332 PHE333 ASP334 ARG335 ASP336 ASN337 ASN338 ARG339 VAL340 GLY341 PHE342 ALA343 GLU344 ALA345 ALA346
Ligands
Unit 5 NAG1 NAG2
Unit 6 NAG400
Unit 7 2S4401
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany