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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF SERINE HYDROXYMETHYLTRANSFERASE WITH CO BOUND PLP SCHIFF-BASE FROM PLASMODIUM FALCIPARUM
Keywords ALPHA/BETA PROTEIN, TRANSFERASE, METHYLTRANSFERASE ACTIVITY,
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   4O6Z     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   SERINE HYDROXYMETHYLTRANSFERASE  A 448 3544 0
2  Protein   SERINE HYDROXYMETHYLTRANSFERASE  B 445 3516 0
3  Protein   SERINE HYDROXYMETHYLTRANSFERASE  C 441 3490 0
4  Protein   SERINE HYDROXYMETHYLTRANSFERASE  D 445 3516 0
5  Ligand   SERINE HYDROXYMETHYLTRANSFERASE  A 1 0 15
6  Ligand   SERINE HYDROXYMETHYLTRANSFERASE  B 1 0 15
7  Ligand   SERINE HYDROXYMETHYLTRANSFERASE  C 1 0 15
8  Ligand   SERINE HYDROXYMETHYLTRANSFERASE  D 1 0 5
9 Water     138 0 138
total       1921 14066 188
Proteins
Unit 1 HIS-5 PRO-4 PHE-3 THR-2 PRO-1 GLY0 MET1 PHE2 ASN3 ASN4 ASP5 PRO6 LEU7 GLN8 LYS9 TYR10 ASP11 LYS12 GLU13 LEU14 PHE15 ASP16 LEU17 LEU18 GLU19 LYS20 GLU21 LYS22 ASN23 ARG24 GLN25 ILE26 GLU27 THR28 ILE29 ASN30 LEU31 ILE32 ALA33 SER34 GLU35 ASN36 LEU37 THR38 ASN39 THR40 ALA41 VAL42 ARG43 GLU44 CYS45 LEU46 GLY47 ASP48 ARG49 ILE50 SER51 ASN52 LYS53 TYR54 SER55 GLU56 GLY57 TYR58 PRO59 HIS60 LYS61 ARG62 TYR63 TYR64 GLY65 GLY66 ASN67 ASP68 TYR69 VAL70 ASP71 LYS72 ILE73 GLU74 GLU75 LEU76 CYS77 TYR78 LYS79 ARG80 ALA81 LEU82 GLU83 ALA84 PHE85 ASN86 VAL87 SER88 GLU89 GLU90 GLU91 TRP92 GLY93 VAL94 ASN95 VAL96 GLN97 PRO98 LEU99 SER100 GLY101 SER102 ALA103 ALA104 ASN105 VAL106 GLN107 ALA108 LEU109 TYR110 ALA111 LEU112 VAL113 GLY114 VAL115 LYS116 GLY117 LYS118 ILE119 MET120 GLY121 MET122 HIS123 LEU124 CYS125 SER126 GLY127 GLY128 HIS129 LEU130 THR131 HIS132 GLY133 PHE134 PHE135 ASP136 GLU137 LYS138 LYS139 LYS140 VAL141 SER142 ILE143 THR144 SER145 ASP146 LEU147 PHE148 GLU149 SER150 LYS151 LEU152 TYR153 LYS154 CYS155 ASN156 SER157 GLU158 GLY159 TYR160 VAL161 ASP162 MET163 GLU164 SER165 VAL166 ARG167 ASN168 LEU169 ALA170 LEU171 SER172 PHE173 GLN174 PRO175 LYS176 VAL177 ILE178 ILE179 CYS180 GLY181 TYR182 THR183 SER184 TYR185 PRO186 ARG187 ASP188 ILE189 ASP190 TYR191 LYS192 GLY193 PHE194 ARG195 GLU196 ILE197 CYS198 ASP199 GLU200 VAL201 ASN202 ALA203 TYR204 LEU205 PHE206 ALA207 ASP208 ILE209 SER210 HIS211 ILE212 SER213 SER214 PHE215 VAL216 ALA217 CYS218 ASN219 LEU220 LEU221 ASN222 ASN223 PRO224 PHE225 THR226 TYR227 ALA228 ASP229 VAL230 VAL231 THR232 THR233 THR234 THR235 HIS236 LYS237 ILE238 LEU239 ARG240 GLY241 PRO242 ARG243 SER244 ALA245 LEU246 ILE247 PHE248 PHE249 ASN250 LYS251 LYS252 ARG253 ASN254 PRO255 GLY256 ILE257 ASP258 GLN259 LYS260 ILE261 ASN262 SER263 SER264 VAL265 PHE266 PRO267 SER268 PHE269 GLN270 GLY271 GLY272 PRO273 HIS274 ASN275 ASN276 LYS277 ILE278 ALA279 ALA280 VAL281 ALA282 CYS283 GLN284 LEU285 LYS286 GLU287 VAL288 ASN289 THR290 PRO291 GLU292 PHE293 LYS294 GLU295 TYR296 THR297 LYS298 GLN299 VAL300 LEU301 LEU302 ASN303 SER304 LYS305 ALA306 LEU307 ALA308 GLU309 CYS310 LEU311 LEU312 LYS313 ARG314 ASN315 LEU316 ASP317 LEU318 VAL319 THR320 ASN321 GLY322 THR323 ASP324 ASN325 HIS326 LEU327 ILE328 VAL329 VAL330 ASP331 LEU332 ARG333 LYS334 TYR335 ASN336 ILE337 THR338 GLY339 SER340 LYS341 LEU342 GLN343 GLU344 THR345 CYS346 ASN347 ALA348 ILE349 ASN350 ILE351 ALA352 LEU353 ASN354 LYS355 ASN356 THR357 ILE358 PRO359 SER360 ASP361 VAL362 ASP363 CYS364 VAL365 SER366 PRO367 SER368 GLY369 ILE370 ARG371 ILE372 GLY373 THR374 PRO375 ALA376 LEU377 THR378 THR379 ARG380 GLY381 CYS382 LYS383 GLU384 LYS385 ASP386 MET387 GLU388 PHE389 ILE390 ALA391 ASP392 MET393 LEU394 LEU395 LYS396 ALA397 ILE398 LEU399 LEU400 THR401 ASP402 GLU403 LEU404 GLN405 GLN406 LYS407 TYR408 GLY409 LYS410 LYS411 LEU412 VAL413 ASP414 PHE415 LYS416 LYS417 GLY418 LEU419 VAL420 ASN421 ASN422 PRO423 LYS424 ILE425 ASP426 GLU427 LEU428 LYS429 LYS430 GLU431 VAL432 VAL433 GLN434 TRP435 ALA436 LYS437 ASN438 LEU439 PRO440 PHE441 ALA442
Unit 2 THR-2 PRO-1 GLY0 MET1 PHE2 ASN3 ASN4 ASP5 PRO6 LEU7 GLN8 LYS9 TYR10 ASP11 LYS12 GLU13 LEU14 PHE15 ASP16 LEU17 LEU18 GLU19 LYS20 GLU21 LYS22 ASN23 ARG24 GLN25 ILE26 GLU27 THR28 ILE29 ASN30 LEU31 ILE32 ALA33 SER34 GLU35 ASN36 LEU37 THR38 ASN39 THR40 ALA41 VAL42 ARG43 GLU44 CYS45 LEU46 GLY47 ASP48 ARG49 ILE50 SER51 ASN52 LYS53 TYR54 SER55 GLU56 GLY57 TYR58 PRO59 HIS60 LYS61 ARG62 TYR63 TYR64 GLY65 GLY66 ASN67 ASP68 TYR69 VAL70 ASP71 LYS72 ILE73 GLU74 GLU75 LEU76 CYS77 TYR78 LYS79 ARG80 ALA81 LEU82 GLU83 ALA84 PHE85 ASN86 VAL87 SER88 GLU89 GLU90 GLU91 TRP92 GLY93 VAL94 ASN95 VAL96 GLN97 PRO98 LEU99 SER100 GLY101 SER102 ALA103 ALA104 ASN105 VAL106 GLN107 ALA108 LEU109 TYR110 ALA111 LEU112 VAL113 GLY114 VAL115 LYS116 GLY117 LYS118 ILE119 MET120 GLY121 MET122 HIS123 LEU124 CYS125 SER126 GLY127 GLY128 HIS129 LEU130 THR131 HIS132 GLY133 PHE134 PHE135 ASP136 GLU137 LYS138 LYS139 LYS140 VAL141 SER142 ILE143 THR144 SER145 ASP146 LEU147 PHE148 GLU149 SER150 LYS151 LEU152 TYR153 LYS154 CYS155 ASN156 SER157 GLU158 GLY159 TYR160 VAL161 ASP162 MET163 GLU164 SER165 VAL166 ARG167 ASN168 LEU169 ALA170 LEU171 SER172 PHE173 GLN174 PRO175 LYS176 VAL177 ILE178 ILE179 CYS180 GLY181 TYR182 THR183 SER184 TYR185 PRO186 ARG187 ASP188 ILE189 ASP190 TYR191 LYS192 GLY193 PHE194 ARG195 GLU196 ILE197 CYS198 ASP199 GLU200 VAL201 ASN202 ALA203 TYR204 LEU205 PHE206 ALA207 ASP208 ILE209 SER210 HIS211 ILE212 SER213 SER214 PHE215 VAL216 ALA217 CYS218 ASN219 LEU220 LEU221 ASN222 ASN223 PRO224 PHE225 THR226 TYR227 ALA228 ASP229 VAL230 VAL231 THR232 THR233 THR234 THR235 HIS236 LYS237 ILE238 LEU239 ARG240 GLY241 PRO242 ARG243 SER244 ALA245 LEU246 ILE247 PHE248 PHE249 ASN250 LYS251 LYS252 ARG253 ASN254 PRO255 GLY256 ILE257 ASP258 GLN259 LYS260 ILE261 ASN262 SER263 SER264 VAL265 PHE266 PRO267 SER268 PHE269 GLN270 GLY271 GLY272 PRO273 HIS274 ASN275 ASN276 LYS277 ILE278 ALA279 ALA280 VAL281 ALA282 CYS283 GLN284 LEU285 LYS286 GLU287 VAL288 ASN289 THR290 PRO291 GLU292 PHE293 LYS294 GLU295 TYR296 THR297 LYS298 GLN299 VAL300 LEU301 LEU302 ASN303 SER304 LYS305 ALA306 LEU307 ALA308 GLU309 CYS310 LEU311 LEU312 LYS313 ARG314 ASN315 LEU316 ASP317 LEU318 VAL319 THR320 ASN321 GLY322 THR323 ASP324 ASN325 HIS326 LEU327 ILE328 VAL329 VAL330 ASP331 LEU332 ARG333 LYS334 TYR335 ASN336 ILE337 THR338 GLY339 SER340 LYS341 LEU342 GLN343 GLU344 THR345 CYS346 ASN347 ALA348 ILE349 ASN350 ILE351 ALA352 LEU353 ASN354 LYS355 ASN356 THR357 ILE358 PRO359 SER360 ASP361 VAL362 ASP363 CYS364 VAL365 SER366 PRO367 SER368 GLY369 ILE370 ARG371 ILE372 GLY373 THR374 PRO375 ALA376 LEU377 THR378 THR379 ARG380 GLY381 CYS382 LYS383 GLU384 LYS385 ASP386 MET387 GLU388 PHE389 ILE390 ALA391 ASP392 MET393 LEU394 LEU395 LYS396 ALA397 ILE398 LEU399 LEU400 THR401 ASP402 GLU403 LEU404 GLN405 GLN406 LYS407 TYR408 GLY409 LYS410 LYS411 LEU412 VAL413 ASP414 PHE415 LYS416 LYS417 GLY418 LEU419 VAL420 ASN421 ASN422 PRO423 LYS424 ILE425 ASP426 GLU427 LEU428 LYS429 LYS430 GLU431 VAL432 VAL433 GLN434 TRP435 ALA436 LYS437 ASN438 LEU439 PRO440 PHE441 ALA442
Unit 3 PHE2 ASN3 ASN4 ASP5 PRO6 LEU7 GLN8 LYS9 TYR10 ASP11 LYS12 GLU13 LEU14 PHE15 ASP16 LEU17 LEU18 GLU19 LYS20 GLU21 LYS22 ASN23 ARG24 GLN25 ILE26 GLU27 THR28 ILE29 ASN30 LEU31 ILE32 ALA33 SER34 GLU35 ASN36 LEU37 THR38 ASN39 THR40 ALA41 VAL42 ARG43 GLU44 CYS45 LEU46 GLY47 ASP48 ARG49 ILE50 SER51 ASN52 LYS53 TYR54 SER55 GLU56 GLY57 TYR58 PRO59 HIS60 LYS61 ARG62 TYR63 TYR64 GLY65 GLY66 ASN67 ASP68 TYR69 VAL70 ASP71 LYS72 ILE73 GLU74 GLU75 LEU76 CYS77 TYR78 LYS79 ARG80 ALA81 LEU82 GLU83 ALA84 PHE85 ASN86 VAL87 SER88 GLU89 GLU90 GLU91 TRP92 GLY93 VAL94 ASN95 VAL96 GLN97 PRO98 LEU99 SER100 GLY101 SER102 ALA103 ALA104 ASN105 VAL106 GLN107 ALA108 LEU109 TYR110 ALA111 LEU112 VAL113 GLY114 VAL115 LYS116 GLY117 LYS118 ILE119 MET120 GLY121 MET122 HIS123 LEU124 CYS125 SER126 GLY127 GLY128 HIS129 LEU130 THR131 HIS132 GLY133 PHE134 PHE135 ASP136 GLU137 LYS138 LYS139 LYS140 VAL141 SER142 ILE143 THR144 SER145 ASP146 LEU147 PHE148 GLU149 SER150 LYS151 LEU152 TYR153 LYS154 CYS155 ASN156 SER157 GLU158 GLY159 TYR160 VAL161 ASP162 MET163 GLU164 SER165 VAL166 ARG167 ASN168 LEU169 ALA170 LEU171 SER172 PHE173 GLN174 PRO175 LYS176 VAL177 ILE178 ILE179 CYS180 GLY181 TYR182 THR183 SER184 TYR185 PRO186 ARG187 ASP188 ILE189 ASP190 TYR191 LYS192 GLY193 PHE194 ARG195 GLU196 ILE197 CYS198 ASP199 GLU200 VAL201 ASN202 ALA203 TYR204 LEU205 PHE206 ALA207 ASP208 ILE209 SER210 HIS211 ILE212 SER213 SER214 PHE215 VAL216 ALA217 CYS218 ASN219 LEU220 LEU221 ASN222 ASN223 PRO224 PHE225 THR226 TYR227 ALA228 ASP229 VAL230 VAL231 THR232 THR233 THR234 THR235 HIS236 LYS237 ILE238 LEU239 ARG240 GLY241 PRO242 ARG243 SER244 ALA245 LEU246 ILE247 PHE248 PHE249 ASN250 LYS251 LYS252 ARG253 ASN254 PRO255 GLY256 ILE257 ASP258 GLN259 LYS260 ILE261 ASN262 SER263 SER264 VAL265 PHE266 PRO267 SER268 PHE269 GLN270 GLY271 GLY272 PRO273 HIS274 ASN275 ASN276 LYS277 ILE278 ALA279 ALA280 VAL281 ALA282 CYS283 GLN284 LEU285 LYS286 GLU287 VAL288 ASN289 THR290 PRO291 GLU292 PHE293 LYS294 GLU295 TYR296 THR297 LYS298 GLN299 VAL300 LEU301 LEU302 ASN303 SER304 LYS305 ALA306 LEU307 ALA308 GLU309 CYS310 LEU311 LEU312 LYS313 ARG314 ASN315 LEU316 ASP317 LEU318 VAL319 THR320 ASN321 GLY322 THR323 ASP324 ASN325 HIS326 LEU327 ILE328 VAL329 VAL330 ASP331 LEU332 ARG333 LYS334 TYR335 ASN336 ILE337 THR338 GLY339 SER340 LYS341 LEU342 GLN343 GLU344 THR345 CYS346 ASN347 ALA348 ILE349 ASN350 ILE351 ALA352 LEU353 ASN354 LYS355 ASN356 THR357 ILE358 PRO359 SER360 ASP361 VAL362 ASP363 CYS364 VAL365 SER366 PRO367 SER368 GLY369 ILE370 ARG371 ILE372 GLY373 THR374 PRO375 ALA376 LEU377 THR378 THR379 ARG380 GLY381 CYS382 LYS383 GLU384 LYS385 ASP386 MET387 GLU388 PHE389 ILE390 ALA391 ASP392 MET393 LEU394 LEU395 LYS396 ALA397 ILE398 LEU399 LEU400 THR401 ASP402 GLU403 LEU404 GLN405 GLN406 LYS407 TYR408 GLY409 LYS410 LYS411 LEU412 VAL413 ASP414 PHE415 LYS416 LYS417 GLY418 LEU419 VAL420 ASN421 ASN422 PRO423 LYS424 ILE425 ASP426 GLU427 LEU428 LYS429 LYS430 GLU431 VAL432 VAL433 GLN434 TRP435 ALA436 LYS437 ASN438 LEU439 PRO440 PHE441 ALA442
Unit 4 THR-2 PRO-1 GLY0 MET1 PHE2 ASN3 ASN4 ASP5 PRO6 LEU7 GLN8 LYS9 TYR10 ASP11 LYS12 GLU13 LEU14 PHE15 ASP16 LEU17 LEU18 GLU19 LYS20 GLU21 LYS22 ASN23 ARG24 GLN25 ILE26 GLU27 THR28 ILE29 ASN30 LEU31 ILE32 ALA33 SER34 GLU35 ASN36 LEU37 THR38 ASN39 THR40 ALA41 VAL42 ARG43 GLU44 CYS45 LEU46 GLY47 ASP48 ARG49 ILE50 SER51 ASN52 LYS53 TYR54 SER55 GLU56 GLY57 TYR58 PRO59 HIS60 LYS61 ARG62 TYR63 TYR64 GLY65 GLY66 ASN67 ASP68 TYR69 VAL70 ASP71 LYS72 ILE73 GLU74 GLU75 LEU76 CYS77 TYR78 LYS79 ARG80 ALA81 LEU82 GLU83 ALA84 PHE85 ASN86 VAL87 SER88 GLU89 GLU90 GLU91 TRP92 GLY93 VAL94 ASN95 VAL96 GLN97 PRO98 LEU99 SER100 GLY101 SER102 ALA103 ALA104 ASN105 VAL106 GLN107 ALA108 LEU109 TYR110 ALA111 LEU112 VAL113 GLY114 VAL115 LYS116 GLY117 LYS118 ILE119 MET120 GLY121 MET122 HIS123 LEU124 CYS125 SER126 GLY127 GLY128 HIS129 LEU130 THR131 HIS132 GLY133 PHE134 PHE135 ASP136 GLU137 LYS138 LYS139 LYS140 VAL141 SER142 ILE143 THR144 SER145 ASP146 LEU147 PHE148 GLU149 SER150 LYS151 LEU152 TYR153 LYS154 CYS155 ASN156 SER157 GLU158 GLY159 TYR160 VAL161 ASP162 MET163 GLU164 SER165 VAL166 ARG167 ASN168 LEU169 ALA170 LEU171 SER172 PHE173 GLN174 PRO175 LYS176 VAL177 ILE178 ILE179 CYS180 GLY181 TYR182 THR183 SER184 TYR185 PRO186 ARG187 ASP188 ILE189 ASP190 TYR191 LYS192 GLY193 PHE194 ARG195 GLU196 ILE197 CYS198 ASP199 GLU200 VAL201 ASN202 ALA203 TYR204 LEU205 PHE206 ALA207 ASP208 ILE209 SER210 HIS211 ILE212 SER213 SER214 PHE215 VAL216 ALA217 CYS218 ASN219 LEU220 LEU221 ASN222 ASN223 PRO224 PHE225 THR226 TYR227 ALA228 ASP229 VAL230 VAL231 THR232 THR233 THR234 THR235 HIS236 LYS237 ILE238 LEU239 ARG240 GLY241 PRO242 ARG243 SER244 ALA245 LEU246 ILE247 PHE248 PHE249 ASN250 LYS251 LYS252 ARG253 ASN254 PRO255 GLY256 ILE257 ASP258 GLN259 LYS260 ILE261 ASN262 SER263 SER264 VAL265 PHE266 PRO267 SER268 PHE269 GLN270 GLY271 GLY272 PRO273 HIS274 ASN275 ASN276 LYS277 ILE278 ALA279 ALA280 VAL281 ALA282 CYS283 GLN284 LEU285 LYS286 GLU287 VAL288 ASN289 THR290 PRO291 GLU292 PHE293 LYS294 GLU295 TYR296 THR297 LYS298 GLN299 VAL300 LEU301 LEU302 ASN303 SER304 LYS305 ALA306 LEU307 ALA308 GLU309 CYS310 LEU311 LEU312 LYS313 ARG314 ASN315 LEU316 ASP317 LEU318 VAL319 THR320 ASN321 GLY322 THR323 ASP324 ASN325 HIS326 LEU327 ILE328 VAL329 VAL330 ASP331 LEU332 ARG333 LYS334 TYR335 ASN336 ILE337 THR338 GLY339 SER340 LYS341 LEU342 GLN343 GLU344 THR345 CYS346 ASN347 ALA348 ILE349 ASN350 ILE351 ALA352 LEU353 ASN354 LYS355 ASN356 THR357 ILE358 PRO359 SER360 ASP361 VAL362 ASP363 CYS364 VAL365 SER366 PRO367 SER368 GLY369 ILE370 ARG371 ILE372 GLY373 THR374 PRO375 ALA376 LEU377 THR378 THR379 ARG380 GLY381 CYS382 LYS383 GLU384 LYS385 ASP386 MET387 GLU388 PHE389 ILE390 ALA391 ASP392 MET393 LEU394 LEU395 LYS396 ALA397 ILE398 LEU399 LEU400 THR401 ASP402 GLU403 LEU404 GLN405 GLN406 LYS407 TYR408 GLY409 LYS410 LYS411 LEU412 VAL413 ASP414 PHE415 LYS416 LYS417 GLY418 LEU419 VAL420 ASN421 ASN422 PRO423 LYS424 ILE425 ASP426 GLU427 LEU428 LYS429 LYS430 GLU431 VAL432 VAL433 GLN434 TRP435 ALA436 LYS437 ASN438 LEU439 PRO440 PHE441 ALA442
Ligands
Unit 5 PLP701
Unit 6 PLP701
Unit 7 PLP701
Unit 8 PO4501
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany