4NY8 - Sequence, Chains, Asymmetric and Biological Units

• Title: DNA POLYMERASE BETA WITH O6MG IN THE TEMPLATE BASE OPPOSITE INCOMING NON-HYDROLYZABLE CTP WITH MANGANESE IN THE ACTIVE
• Keywords: DNA BINDING, DNA POLYMERASE FOLD, NUCLEOTIDYL TRANSFER, NUCL TRANSFERASE, LYASE-DNA COMPLEX
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	4NY8	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	DNA POLYMERASE BETA	A	323	2551	0
2	Other macromolecule	5'-D(*CP*CP*GP*AP*CP*(6OG)P*TP*CP*GP*CP*AP*TP*CP* 3'	T	16	299	23
3	Other macromolecule	5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*A)-3'	P	10	205	0
4	Other macromolecule	5'-D(P*GP*TP*CP*GP*G)-3'	D	5	106	0
5	Ligand	DNA POLYMERASE BETA	A	5	0	32
6	Water			120	0	120
total				479	3161	175

Proteins

Unit 1

LEU 11 ASN 12 GLY 13 GLY 14 ILE 15 THR 16 ASP 17 MET 18 LEU 19 THR 20 GLU 21 LEU 22 ALA 23 ASN 24 PHE 25 GLU 26 LYS 27 ASN 28 VAL 29 SER 30 GLN 31 ALA 32 ILE 33 HIS 34 LYS 35 TYR 36 ASN 37 ALA 38 TYR 39 ARG 40 LYS 41 ALA 42 ALA 43 SER 44 VAL 45 ILE 46 ALA 47 LYS 48 TYR 49 PRO 50 HIS 51 LYS 52 ILE 53 LYS 54 SER 55 GLY 56 ALA 57 GLU 58 ALA 59 LYS 60 LYS 61 LEU 62 PRO 63 GLY 64 VAL 65 GLY 66 THR 67 LYS 68 ILE 69 ALA 70 GLU 71 LYS 72 ILE 73 ASP 74 GLU 75 PHE 76 LEU 77 ALA 78 THR 79 GLY 80 LYS 81 LEU 82 ARG 83 LYS 84 LEU 85 GLU 86 LYS 87 ILE 88 ARG 89 GLN 90 ASP 91 ASP 92 THR 93 SER 94 SER 95 SER 96 ILE 97 ASN 98 PHE 99 LEU 100 THR 101 ARG 102 VAL 103 SER 104 GLY 105 ILE 106 GLY 107 PRO 108 SER 109 ALA 110 ALA 111 ARG 112 LYS 113 PHE 114 VAL 115 ASP 116 GLU 117 GLY 118 ILE 119 LYS 120 THR 121 LEU 122 GLU 123 ASP 124 LEU 125 ARG 126 LYS 127 ASN 128 GLU 129 ASP 130 LYS 131 LEU 132 ASN 133 HIS 134 HIS 135 GLN 136 ARG 137 ILE 138 GLY 139 LEU 140 LYS 141 TYR 142 PHE 143 GLY 144 ASP 145 PHE 146 GLU 147 LYS 148 ARG 149 ILE 150 PRO 151 ARG 152 GLU 153 GLU 154 MET 155 LEU 156 GLN 157 MET 158 GLN 159 ASP 160 ILE 161 VAL 162 LEU 163 ASN 164 GLU 165 VAL 166 LYS 167 LYS 168 VAL 169 ASP 170 SER 171 GLU 172 TYR 173 ILE 174 ALA 175 THR 176 VAL 177 CYS 178 GLY 179 SER 180 PHE 181 ARG 182 ARG 183 GLY 184 ALA 185 GLU 186 SER 187 SER 188 GLY 189 ASP 190 MET 191 ASP 192 VAL 193 LEU 194 LEU 195 THR 196 HIS 197 PRO 198 SER 199 PHE 200 THR 201 SER 202 GLU 203 SER 204 GLN 207 PRO 208 LYS 209 LEU 210 LEU 211 HIS 212 GLN 213 VAL 214 VAL 215 GLU 216 GLN 217 LEU 218 GLN 219 LYS 220 VAL 221 HIS 222 PHE 223 ILE 224 THR 225 ASP 226 THR 227 LEU 228 SER 229 LYS 230 GLY 231 GLU 232 THR 233 LYS 234 PHE 235 MET 236 GLY 237 VAL 238 CYS 239 GLN 240 LEU 241 PRO 242 SER 243 LYS 244 ASN 245 ASP 246 GLU 247 LYS 248 GLU 249 TYR 250 PRO 251 HIS 252 ARG 253 ARG 254 ILE 255 ASP 256 ILE 257 ARG 258 LEU 259 ILE 260 PRO 261 LYS 262 ASP 263 GLN 264 TYR 265 TYR 266 CYS 267 GLY 268 VAL 269 LEU 270 TYR 271 PHE 272 THR 273 GLY 274 SER 275 ASP 276 ILE 277 PHE 278 ASN 279 LYS 280 ASN 281 MET 282 ARG 283 ALA 284 HIS 285 ALA 286 LEU 287 GLU 288 LYS 289 GLY 290 PHE 291 THR 292 ILE 293 ASN 294 GLU 295 TYR 296 THR 297 ILE 298 ARG 299 PRO 300 LEU 301 GLY 302 VAL 303 THR 304 GLY 305 VAL 306 ALA 307 GLY 308 GLU 309 PRO 310 LEU 311 PRO 312 VAL 313 ASP 314 SER 315 GLU 316 LYS 317 ASP 318 ILE 319 PHE 320 ASP 321 TYR 322 ILE 323 GLN 324 TRP 325 LYS 326 TYR 327 ARG 328 GLU 329 PRO 330 LYS 331 ASP 332 ARG 333 SER 334 GLU 335

Other macromolecules

Unit 2	DC 1 DC 2 DG 3 DA 4 DC 5 6OG 6 DT 7 DC 8 DG 9 DC 10 DA 11 DT 12 DC 13 DA 14 DG 15 DC 16
Unit 3	DG 1 DC 2 DT 3 DG 4 DA 5 DT 6 DG 7 DC 8 DG 9 DA 10
Unit 4	DG 1 DT 2 DC 3 DG 4 DG 5

Ligands

Unit 5

MN 401 MN 402 NA 403 NA 404 0KX 405