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Sequence, Chains, Asymmetric and Biological Units

Title COMPUTATIONALLY DESIGNED TWO-COMPONENT SELF-ASSEMBLING TETRA CAGE, T33-21, CRYSTALLIZED IN SPACE GROUP R32
Keywords TWO-COMPONENT, SELF-ASSEMBLING, TETRAHEDRON, DESIGNED PROTEI COMPUTATIONAL DESIGN, COMPUTATIONAL BIOLOGY, PROTEIN ENGINE MULTIMERIZATION, NANOMATERIAL, NANOSTRUCTURE, PROTEIN BINDI
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4NWP     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   PUTATIVE UNCHARACTERIZED PROTEIN  A 145 1082 0
2  Protein   PUTATIVE UNCHARACTERIZED PROTEIN  B 141 1054 0
3  Protein   PUTATIVE UNCHARACTERIZED PROTEIN  C 140 1060 0
4  Protein   PUTATIVE UNCHARACTERIZED PROTEIN  D 149 1127 0
5  Protein   UNCHARACTERIZED PROTEIN  E 118 868 0
6  Protein   UNCHARACTERIZED PROTEIN  F 118 864 0
7  Protein   UNCHARACTERIZED PROTEIN  G 118 868 0
8  Protein   UNCHARACTERIZED PROTEIN  H 117 861 0
9  Ligand   PUTATIVE UNCHARACTERIZED PROTEIN  A 5 0 25
10  Ligand   PUTATIVE UNCHARACTERIZED PROTEIN  B 3 0 15
11  Ligand   PUTATIVE UNCHARACTERIZED PROTEIN  C 3 0 15
12  Ligand   PUTATIVE UNCHARACTERIZED PROTEIN  D 3 0 15
13  Ligand   UNCHARACTERIZED PROTEIN  E 4 0 20
14  Ligand   UNCHARACTERIZED PROTEIN  F 4 0 20
15  Ligand   UNCHARACTERIZED PROTEIN  G 3 0 15
16  Ligand   UNCHARACTERIZED PROTEIN  H 4 0 16
17 Water     225 0 225
total       1300 7784 366

Proteins
Unit 1 LYS23 ASP24 SER25 PRO26 ILE27 ILE28 GLU29 ALA30 ASN31 GLY32 THR33 LEU34 ASP35 GLU36 LEU37 THR38 SER39 PHE40 ILE41 GLY42 GLU43 ALA44 LYS45 HIS46 TYR47 VAL48 ASP49 GLU50 GLU51 MET52 LYS53 GLY54 ILE55 LEU56 GLU57 GLU58 ILE59 GLN60 ASN61 ASP62 ILE63 TYR64 LYS65 ILE66 MET67 GLY68 GLU69 ILE70 GLY71 SER72 LYS73 GLY74 LYS75 ILE76 GLU77 GLY78 ILE79 SER80 GLU81 GLU82 ARG83 ILE84 ALA85 TRP86 LEU87 LEU88 LYS89 LEU90 ILE91 LEU92 ARG93 TYR94 MET95 GLU96 MET97 VAL98 ASN99 LEU100 SER102 PHE103 VAL104 LEU105 PRO106 GLY107 GLY108 THR109 LEU110 GLU111 SER112 ALA113 LYS114 LEU115 ASP116 VAL117 CYS118 ARG119 THR120 ILE121 ALA122 ARG123 ARG124 ALA125 LEU126 ARG127 LYS128 VAL129 LEU130 THR131 VAL132 THR133 ARG134 GLU135 PHE136 GLY137 ILE138 GLY139 ALA140 GLU141 ALA142 ALA143 ALA144 TYR145 LEU146 LEU147 ALA148 LEU149 SER150 ASP151 LEU152 LEU153 PHE154 LEU155 LEU156 ALA157 ARG158 VAL159 ILE160 GLU161 ILE162 GLU163 LYS164 ASN165 LYS166 LEU167 LYS168
Unit 2 LYS23 ASP24 SER25 PRO26 ILE27 ILE28 GLU29 ALA30 ASN31 GLY32 THR33 LEU34 ASP35 GLU36 LEU37 THR38 SER39 PHE40 ILE41 GLY42 GLU43 ALA44 LYS45 HIS46 TYR47 VAL48 ASP49 GLU50 GLU51 MET52 LYS53 GLY54 ILE55 LEU56 GLU57 GLU58 ILE59 GLN60 ASN61 ASP62 ILE63 TYR64 LYS65 ILE66 MET67 GLY68 GLU69 ILE70 GLY71 SER72 LYS73 GLY74 LYS75 ILE76 GLU77 GLY78 ILE79 SER80 GLU81 GLU82 ARG83 ILE84 ALA85 TRP86 LEU87 LEU88 LYS89 LEU90 ILE91 LEU92 ARG93 TYR94 MET95 GLU96 MET97 VAL98 ASN99 LEU100 PHE103 VAL104 LEU105 PRO106 GLY107 GLY108 THR109 LEU110 GLU111 SER112 ALA113 LYS114 LEU115 ASP116 VAL117 CYS118 ARG119 THR120 ILE121 ALA122 ARG123 ARG124 ALA125 LEU126 ARG127 LYS128 VAL129 LEU130 THR131 VAL132 THR133 ARG134 GLU135 PHE136 GLY137 ILE138 GLY139 ALA140 GLU141 ALA142 ALA143 ALA144 TYR145 LEU146 LEU147 ALA148 LEU149 SER150 ASP151 LEU152 LEU153 PHE154 LEU155 LEU156 ALA157 ARG158 VAL159 ILE160 GLU161 ILE162 GLU163 LYS164 ASN165
Unit 3 LYS23 ASP24 SER25 PRO26 ILE27 ILE28 GLU29 ALA30 ASN31 GLY32 THR33 LEU34 ASP35 GLU36 LEU37 THR38 SER39 PHE40 ILE41 GLY42 GLU43 ALA44 LYS45 HIS46 TYR47 VAL48 ASP49 GLU50 GLU51 MET52 LYS53 GLY54 ILE55 LEU56 GLU57 GLU58 ILE59 GLN60 ASN61 ASP62 ILE63 TYR64 LYS65 ILE66 MET67 GLY68 GLU69 ILE70 GLY71 SER72 LYS73 GLY74 LYS75 ILE76 GLU77 GLY78 ILE79 SER80 GLU81 GLU82 ARG83 ILE84 ALA85 TRP86 LEU87 LEU88 LYS89 LEU90 ILE91 LEU92 ARG93 TYR94 MET95 GLU96 MET97 VAL98 ASN99 PHE103 VAL104 LEU105 PRO106 GLY107 GLY108 THR109 LEU110 GLU111 SER112 ALA113 LYS114 LEU115 ASP116 VAL117 CYS118 ARG119 THR120 ILE121 ALA122 ARG123 ARG124 ALA125 LEU126 ARG127 LYS128 VAL129 LEU130 THR131 VAL132 THR133 ARG134 GLU135 PHE136 GLY137 ILE138 GLY139 ALA140 GLU141 ALA142 ALA143 ALA144 TYR145 LEU146 LEU147 ALA148 LEU149 SER150 ASP151 LEU152 LEU153 PHE154 LEU155 LEU156 ALA157 ARG158 VAL159 ILE160 GLU161 ILE162 GLU163 LYS164 ASN165
Unit 4 LYS23 ASP24 SER25 PRO26 ILE27 ILE28 GLU29 ALA30 ASN31 GLY32 THR33 LEU34 ASP35 GLU36 LEU37 THR38 SER39 PHE40 ILE41 GLY42 GLU43 ALA44 LYS45 HIS46 TYR47 VAL48 ASP49 GLU50 GLU51 MET52 LYS53 GLY54 ILE55 LEU56 GLU57 GLU58 ILE59 GLN60 ASN61 ASP62 ILE63 TYR64 LYS65 ILE66 MET67 GLY68 GLU69 ILE70 GLY71 SER72 LYS73 GLY74 LYS75 ILE76 GLU77 GLY78 ILE79 SER80 GLU81 GLU82 ARG83 ILE84 ALA85 TRP86 LEU87 LEU88 LYS89 LEU90 ILE91 LEU92 ARG93 TYR94 MET95 GLU96 MET97 VAL98 ASN99 LEU100 LYS101 SER102 PHE103 VAL104 LEU105 PRO106 GLY107 GLY108 THR109 LEU110 GLU111 SER112 ALA113 LYS114 LEU115 ASP116 VAL117 CYS118 ARG119 THR120 ILE121 ALA122 ARG123 ARG124 ALA125 LEU126 ARG127 LYS128 VAL129 LEU130 THR131 VAL132 THR133 ARG134 GLU135 PHE136 GLY137 ILE138 GLY139 ALA140 GLU141 ALA142 ALA143 ALA144 TYR145 LEU146 LEU147 ALA148 LEU149 SER150 ASP151 LEU152 LEU153 PHE154 LEU155 LEU156 ALA157 ARG158 VAL159 ILE160 GLU161 ILE162 GLU163 LYS164 ASN165 LYS166 LEU167 LYS168 GLU169 VAL170 ARG171
Unit 5 PRO2 HIS3 LEU4 VAL5 ILE6 GLU7 ALA8 THR9 ALA10 ASN11 LEU12 ARG13 LEU14 GLU15 THR16 SER17 PRO18 GLY19 GLU20 LEU21 LEU22 GLU23 GLN24 ALA25 ASN26 LYS27 ALA28 LEU29 PHE30 ALA31 SER32 GLY33 GLN34 PHE35 GLY36 GLU37 ALA38 ASP39 ILE40 LYS41 SER42 ARG43 PHE44 VAL45 THR46 LEU47 GLU48 ALA49 TYR50 ARG51 GLN52 GLY53 THR54 ALA55 ALA56 VAL57 GLU58 ARG59 ALA60 TYR61 LEU62 HIS63 ALA64 CYS65 LEU66 SER67 ILE68 LEU69 ASP70 GLY71 ARG72 ASP73 ILE74 ALA75 THR76 ARG77 THR78 LEU79 LEU80 GLY81 ALA82 SER83 LEU84 CYS85 ALA86 VAL87 LEU88 ALA89 GLU90 ALA91 VAL92 ALA93 GLY94 GLY95 GLY96 GLU97 GLU98 GLY99 VAL100 GLN101 VAL102 SER103 VAL104 GLU105 VAL106 ARG107 GLU108 MET109 GLU110 ARG111 LEU112 SER113 TYR114 ALA115 LYS116 ARG117 VAL118 VAL119
Unit 6 PRO2 HIS3 LEU4 VAL5 ILE6 GLU7 ALA8 THR9 ALA10 ASN11 LEU12 ARG13 LEU14 GLU15 THR16 SER17 PRO18 GLY19 GLU20 LEU21 LEU22 GLU23 GLN24 ALA25 ASN26 LYS27 ALA28 LEU29 PHE30 ALA31 SER32 GLY33 GLN34 PHE35 GLY36 GLU37 ALA38 ASP39 ILE40 LYS41 SER42 ARG43 PHE44 VAL45 THR46 LEU47 GLU48 ALA49 TYR50 ARG51 GLN52 GLY53 THR54 ALA55 ALA56 VAL57 GLU58 ARG59 ALA60 TYR61 LEU62 HIS63 ALA64 CYS65 LEU66 SER67 ILE68 LEU69 ASP70 GLY71 ARG72 ASP73 ILE74 ALA75 THR76 ARG77 THR78 LEU79 LEU80 GLY81 ALA82 SER83 LEU84 CYS85 ALA86 VAL87 LEU88 ALA89 GLU90 ALA91 VAL92 ALA93 GLY94 GLY95 GLY96 GLU97 GLU98 GLY99 VAL100 GLN101 VAL102 SER103 VAL104 GLU105 VAL106 ARG107 GLU108 MET109 GLU110 ARG111 LEU112 SER113 TYR114 ALA115 LYS116 ARG117 VAL118 VAL119
Unit 7 PRO2 HIS3 LEU4 VAL5 ILE6 GLU7 ALA8 THR9 ALA10 ASN11 LEU12 ARG13 LEU14 GLU15 THR16 SER17 PRO18 GLY19 GLU20 LEU21 LEU22 GLU23 GLN24 ALA25 ASN26 LYS27 ALA28 LEU29 PHE30 ALA31 SER32 GLY33 GLN34 PHE35 GLY36 GLU37 ALA38 ASP39 ILE40 LYS41 SER42 ARG43 PHE44 VAL45 THR46 LEU47 GLU48 ALA49 TYR50 ARG51 GLN52 GLY53 THR54 ALA55 ALA56 VAL57 GLU58 ARG59 ALA60 TYR61 LEU62 HIS63 ALA64 CYS65 LEU66 SER67 ILE68 LEU69 ASP70 GLY71 ARG72 ASP73 ILE74 ALA75 THR76 ARG77 THR78 LEU79 LEU80 GLY81 ALA82 SER83 LEU84 CYS85 ALA86 VAL87 LEU88 ALA89 GLU90 ALA91 VAL92 ALA93 GLY94 GLY95 GLY96 GLU97 GLU98 GLY99 VAL100 GLN101 VAL102 SER103 VAL104 GLU105 VAL106 ARG107 GLU108 MET109 GLU110 ARG111 LEU112 SER113 TYR114 ALA115 LYS116 ARG117 VAL118 VAL119
Unit 8 PRO2 HIS3 LEU4 VAL5 ILE6 GLU7 ALA8 THR9 ALA10 ASN11 LEU12 ARG13 LEU14 GLU15 THR16 SER17 PRO18 GLY19 GLU20 LEU21 LEU22 GLU23 GLN24 ALA25 ASN26 LYS27 ALA28 LEU29 PHE30 ALA31 SER32 GLY33 GLN34 PHE35 GLY36 GLU37 ALA38 ASP39 ILE40 LYS41 SER42 ARG43 PHE44 VAL45 THR46 LEU47 GLU48 ALA49 TYR50 ARG51 GLN52 GLY53 THR54 ALA55 VAL57 GLU58 ARG59 ALA60 TYR61 LEU62 HIS63 ALA64 CYS65 LEU66 SER67 ILE68 LEU69 ASP70 GLY71 ARG72 ASP73 ILE74 ALA75 THR76 ARG77 THR78 LEU79 LEU80 GLY81 ALA82 SER83 LEU84 CYS85 ALA86 VAL87 LEU88 ALA89 GLU90 ALA91 VAL92 ALA93 GLY94 GLY95 GLY96 GLU97 GLU98 GLY99 VAL100 GLN101 VAL102 SER103 VAL104 GLU105 VAL106 ARG107 GLU108 MET109 GLU110 ARG111 LEU112 SER113 TYR114 ALA115 LYS116 ARG117 VAL118 VAL119

Ligands
Unit 9 SO4201 SO4202 SO4203 SO4204 SO4205
Unit 10 SO4201 SO4202 SO4203
Unit 11 SO4201 SO4202 SO4203
Unit 12 SO4201 SO4202 SO4203
Unit 13 SO4201 SO4202 SO4203 SO4204
Unit 14 SO4201 SO4202 SO4203 SO4204
Unit 15 SO4201 SO4202 SO4203
Unit 16 SO4201 SO4202 SO4203 NH4204

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany