4NQK - Sequence, Chains, Asymmetric and Biological Units

• Title: STRUCTURE OF AN UBIQUITIN COMPLEX
• Keywords: CARD DOMAIN, HYDROLASE-APOPTOSIS COMPLEX
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	4NQK	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	PROBABLE ATP-DEPENDENT RNA HELICASE DDX58	A	188	3041	0
2	Protein	PROBABLE ATP-DEPENDENT RNA HELICASE DDX58	B	188	3034	0
3	Protein	PROBABLE ATP-DEPENDENT RNA HELICASE DDX58	C	188	3000	0
4	Protein	UBIQUITIN	E	72	1169	0
5	Protein	UBIQUITIN	F	73	1171	0
6	Protein	UBIQUITIN	G	71	1128	0
7	Protein	UBIQUITIN	H	75	1202	0
8	Protein	UBIQUITIN	I	71	1125	0
9	Protein	UBIQUITIN	J	73	1188	0
10	Protein	PROBABLE ATP-DEPENDENT RNA HELICASE DDX58	D	188	3081	0
total				1187	19139	0

Proteins

Unit 1	MET 1 THR 2 THR 3 GLU 4 GLN 5 ARG 6 ARG 7 SER 8 LEU 9 GLN 10 ALA 11 PHE 12 GLN 13 ASP 14 TYR 15 ILE 16 ARG 17 LYS 18 THR 19 LEU 20 ASP 21 PRO 22 THR 23 TYR 24 ILE 25 LEU 26 SER 27 TYR 28 MET 29 ALA 30 PRO 31 TRP 32 PHE 33 ARG 34 GLU 35 GLU 36 GLU 37 VAL 38 GLN 39 TYR 40 ILE 41 GLN 42 ALA 43 GLU 44 LYS 45 ASN 46 ASN 47 LYS 48 GLY 49 PRO 50 MET 51 GLU 52 ALA 53 ALA 54 THR 55 LEU 56 PHE 57 LEU 58 LYS 59 PHE 60 LEU 61 LEU 62 GLU 63 LEU 64 GLN 65 GLU 66 GLU 67 GLY 68 TRP 69 PHE 70 ARG 71 GLY 72 PHE 73 LEU 74 ASP 75 ALA 76 LEU 77 ASP 78 HIS 79 ALA 80 GLY 81 TYR 82 SER 83 GLY 84 LEU 85 TYR 86 GLU 87 ALA 88 ILE 89 GLU 90 SER 91 TRP 92 ASP 93 PHE 94 LYS 95 LYS 96 ILE 97 GLU 98 LYS 99 LEU 100 GLU 101 GLU 102 TYR 103 ARG 104 LEU 105 LEU 106 LEU 107 LYS 108 ARG 109 LEU 110 GLN 111 PRO 112 GLU 113 PHE 114 LYS 115 THR 116 ARG 117 ILE 118 ILE 119 PRO 120 THR 121 ASP 122 ILE 123 ILE 124 SER 125 ASP 126 LEU 127 SER 128 GLU 129 CYS 130 LEU 131 ILE 132 ASN 133 GLN 134 GLU 135 CYS 136 GLU 137 GLU 138 ILE 139 LEU 140 GLN 141 ILE 142 CYS 143 SER 144 THR 145 LYS 146 GLY 147 MET 148 MET 149 ALA 150 GLY 151 ALA 152 GLU 153 LYS 154 LEU 155 VAL 156 GLU 157 CYS 158 LEU 159 LEU 160 ARG 161 SER 162 ASP 163 LYS 164 GLU 165 ASN 166 TRP 167 PRO 168 LYS 169 THR 170 LEU 171 LYS 172 LEU 173 ALA 174 LEU 175 GLU 176 LYS 177 GLU 178 ARG 179 ASN 180 LYS 181 PHE 182 SER 183 GLU 184 LEU 185 TRP 186 ILE 187 VAL 188
Unit 2	MET 1 THR 2 THR 3 GLU 4 GLN 5 ARG 6 ARG 7 SER 8 LEU 9 GLN 10 ALA 11 PHE 12 GLN 13 ASP 14 TYR 15 ILE 16 ARG 17 LYS 18 THR 19 LEU 20 ASP 21 PRO 22 THR 23 TYR 24 ILE 25 LEU 26 SER 27 TYR 28 MET 29 ALA 30 PRO 31 TRP 32 PHE 33 ARG 34 GLU 35 GLU 36 GLU 37 VAL 38 GLN 39 TYR 40 ILE 41 GLN 42 ALA 43 GLU 44 LYS 45 ASN 46 ASN 47 LYS 48 GLY 49 PRO 50 MET 51 GLU 52 ALA 53 ALA 54 THR 55 LEU 56 PHE 57 LEU 58 LYS 59 PHE 60 LEU 61 LEU 62 GLU 63 LEU 64 GLN 65 GLU 66 GLU 67 GLY 68 TRP 69 PHE 70 ARG 71 GLY 72 PHE 73 LEU 74 ASP 75 ALA 76 LEU 77 ASP 78 HIS 79 ALA 80 GLY 81 TYR 82 SER 83 GLY 84 LEU 85 TYR 86 GLU 87 ALA 88 ILE 89 GLU 90 SER 91 TRP 92 ASP 93 PHE 94 LYS 95 LYS 96 ILE 97 GLU 98 LYS 99 LEU 100 GLU 101 GLU 102 TYR 103 ARG 104 LEU 105 LEU 106 LEU 107 LYS 108 ARG 109 LEU 110 GLN 111 PRO 112 GLU 113 PHE 114 LYS 115 THR 116 ARG 117 ILE 118 ILE 119 PRO 120 THR 121 ASP 122 ILE 123 ILE 124 SER 125 ASP 126 LEU 127 SER 128 GLU 129 CYS 130 LEU 131 ILE 132 ASN 133 GLN 134 GLU 135 CYS 136 GLU 137 GLU 138 ILE 139 LEU 140 GLN 141 ILE 142 CYS 143 SER 144 THR 145 LYS 146 GLY 147 MET 148 MET 149 ALA 150 GLY 151 ALA 152 GLU 153 LYS 154 LEU 155 VAL 156 GLU 157 CYS 158 LEU 159 LEU 160 ARG 161 SER 162 ASP 163 LYS 164 GLU 165 ASN 166 TRP 167 PRO 168 LYS 169 THR 170 LEU 171 LYS 172 LEU 173 ALA 174 LEU 175 GLU 176 LYS 177 GLU 178 ARG 179 ASN 180 LYS 181 PHE 182 SER 183 GLU 184 LEU 185 TRP 186 ILE 187 VAL 188
Unit 3	MET 1 THR 2 THR 3 GLU 4 GLN 5 ARG 6 ARG 7 SER 8 LEU 9 GLN 10 ALA 11 PHE 12 GLN 13 ASP 14 TYR 15 ILE 16 ARG 17 LYS 18 THR 19 LEU 20 ASP 21 PRO 22 THR 23 TYR 24 ILE 25 LEU 26 SER 27 TYR 28 MET 29 ALA 30 PRO 31 TRP 32 PHE 33 ARG 34 GLU 35 GLU 36 GLU 37 VAL 38 GLN 39 TYR 40 ILE 41 GLN 42 ALA 43 GLU 44 LYS 45 ASN 46 ASN 47 LYS 48 GLY 49 PRO 50 MET 51 GLU 52 ALA 53 ALA 54 THR 55 LEU 56 PHE 57 LEU 58 LYS 59 PHE 60 LEU 61 LEU 62 GLU 63 LEU 64 GLN 65 GLU 66 GLU 67 GLY 68 TRP 69 PHE 70 ARG 71 GLY 72 PHE 73 LEU 74 ASP 75 ALA 76 LEU 77 ASP 78 HIS 79 ALA 80 GLY 81 TYR 82 SER 83 GLY 84 LEU 85 TYR 86 GLU 87 ALA 88 ILE 89 GLU 90 SER 91 TRP 92 ASP 93 PHE 94 LYS 95 LYS 96 ILE 97 GLU 98 LYS 99 LEU 100 GLU 101 GLU 102 TYR 103 ARG 104 LEU 105 LEU 106 LEU 107 LYS 108 ARG 109 LEU 110 GLN 111 PRO 112 GLU 113 PHE 114 LYS 115 THR 116 ARG 117 ILE 118 ILE 119 PRO 120 THR 121 ASP 122 ILE 123 ILE 124 SER 125 ASP 126 LEU 127 SER 128 GLU 129 CYS 130 LEU 131 ILE 132 ASN 133 GLN 134 GLU 135 CYS 136 GLU 137 GLU 138 ILE 139 LEU 140 GLN 141 ILE 142 CYS 143 SER 144 THR 145 LYS 146 GLY 147 MET 148 MET 149 ALA 150 GLY 151 ALA 152 GLU 153 LYS 154 LEU 155 VAL 156 GLU 157 CYS 158 LEU 159 LEU 160 ARG 161 SER 162 ASP 163 LYS 164 GLU 165 ASN 166 TRP 167 PRO 168 LYS 169 THR 170 LEU 171 LYS 172 LEU 173 ALA 174 LEU 175 GLU 176 LYS 177 GLU 178 ARG 179 ASN 180 LYS 181 PHE 182 SER 183 GLU 184 LEU 185 TRP 186 ILE 187 VAL 188
Unit 4	MET 1 GLN 2 ILE 3 PHE 4 VAL 5 LYS 6 THR 7 LEU 8 THR 9 GLY 10 LYS 11 THR 12 ILE 13 THR 14 LEU 15 GLU 16 VAL 17 GLU 18 PRO 19 SER 20 ASP 21 THR 22 ILE 23 GLU 24 ASN 25 VAL 26 LYS 27 ALA 28 LYS 29 ILE 30 GLN 31 ASP 32 LYS 33 GLU 34 GLY 35 ILE 36 PRO 37 PRO 38 ASP 39 GLN 40 GLN 41 ARG 42 LEU 43 ILE 44 PHE 45 ALA 46 GLY 47 LYS 48 GLN 49 LEU 50 GLU 51 ASP 52 GLY 53 ARG 54 THR 55 LEU 56 SER 57 ASP 58 TYR 59 ASN 60 ILE 61 GLN 62 LYS 63 GLU 64 SER 65 THR 66 LEU 67 HIS 68 LEU 69 VAL 70 LEU 71 ARG 72
Unit 5	MET 1 GLN 2 ILE 3 PHE 4 VAL 5 LYS 6 THR 7 LEU 8 THR 9 GLY 10 LYS 11 THR 12 ILE 13 THR 14 LEU 15 GLU 16 VAL 17 GLU 18 PRO 19 SER 20 ASP 21 THR 22 ILE 23 GLU 24 ASN 25 VAL 26 LYS 27 ALA 28 LYS 29 ILE 30 GLN 31 ASP 32 LYS 33 GLU 34 GLY 35 ILE 36 PRO 37 PRO 38 ASP 39 GLN 40 GLN 41 ARG 42 LEU 43 ILE 44 PHE 45 ALA 46 GLY 47 LYS 48 GLN 49 LEU 50 GLU 51 ASP 52 GLY 53 ARG 54 THR 55 LEU 56 SER 57 ASP 58 TYR 59 ASN 60 ILE 61 GLN 62 LYS 63 GLU 64 SER 65 THR 66 LEU 67 HIS 68 LEU 69 VAL 70 LEU 71 ARG 72 LEU 73
Unit 6	MET 1 GLN 2 ILE 3 PHE 4 VAL 5 LYS 6 THR 7 LEU 8 THR 9 GLY 10 LYS 11 THR 12 ILE 13 THR 14 LEU 15 GLU 16 VAL 17 GLU 18 PRO 19 SER 20 ASP 21 THR 22 ILE 23 GLU 24 ASN 25 VAL 26 LYS 27 ALA 28 LYS 29 ILE 30 GLN 31 ASP 32 LYS 33 GLU 34 GLY 35 ILE 36 PRO 37 PRO 38 ASP 39 GLN 40 GLN 41 ARG 42 LEU 43 ILE 44 PHE 45 ALA 46 GLY 47 LYS 48 GLN 49 LEU 50 GLU 51 ASP 52 GLY 53 ARG 54 THR 55 LEU 56 SER 57 ASP 58 TYR 59 ASN 60 ILE 61 GLN 62 LYS 63 GLU 64 SER 65 THR 66 LEU 67 HIS 68 LEU 69 VAL 70 LEU 71
Unit 7	MET 1 GLN 2 ILE 3 PHE 4 VAL 5 LYS 6 THR 7 LEU 8 THR 9 GLY 10 LYS 11 THR 12 ILE 13 THR 14 LEU 15 GLU 16 VAL 17 GLU 18 PRO 19 SER 20 ASP 21 THR 22 ILE 23 GLU 24 ASN 25 VAL 26 LYS 27 ALA 28 LYS 29 ILE 30 GLN 31 ASP 32 LYS 33 GLU 34 GLY 35 ILE 36 PRO 37 PRO 38 ASP 39 GLN 40 GLN 41 ARG 42 LEU 43 ILE 44 PHE 45 ALA 46 GLY 47 LYS 48 GLN 49 LEU 50 GLU 51 ASP 52 GLY 53 ARG 54 THR 55 LEU 56 SER 57 ASP 58 TYR 59 ASN 60 ILE 61 GLN 62 LYS 63 GLU 64 SER 65 THR 66 LEU 67 HIS 68 LEU 69 VAL 70 LEU 71 ARG 72 LEU 73 ARG 74 GLY 75
Unit 8	MET 1 GLN 2 ILE 3 PHE 4 VAL 5 LYS 6 THR 7 LEU 8 THR 9 GLY 10 LYS 11 THR 12 ILE 13 THR 14 LEU 15 GLU 16 VAL 17 GLU 18 PRO 19 SER 20 ASP 21 THR 22 ILE 23 GLU 24 ASN 25 VAL 26 LYS 27 ALA 28 LYS 29 ILE 30 GLN 31 ASP 32 LYS 33 GLU 34 GLY 35 ILE 36 PRO 37 PRO 38 ASP 39 GLN 40 GLN 41 ARG 42 LEU 43 ILE 44 PHE 45 ALA 46 GLY 47 LYS 48 GLN 49 LEU 50 GLU 51 ASP 52 GLY 53 ARG 54 THR 55 LEU 56 SER 57 ASP 58 TYR 59 ASN 60 ILE 61 GLN 62 LYS 63 GLU 64 SER 65 THR 66 LEU 67 HIS 68 LEU 69 VAL 70 LEU 71
Unit 9	MET 1 GLN 2 ILE 3 PHE 4 VAL 5 LYS 6 THR 7 LEU 8 THR 9 GLY 10 LYS 11 THR 12 ILE 13 THR 14 LEU 15 GLU 16 VAL 17 GLU 18 PRO 19 SER 20 ASP 21 THR 22 ILE 23 GLU 24 ASN 25 VAL 26 LYS 27 ALA 28 LYS 29 ILE 30 GLN 31 ASP 32 LYS 33 GLU 34 GLY 35 ILE 36 PRO 37 PRO 38 ASP 39 GLN 40 GLN 41 ARG 42 LEU 43 ILE 44 PHE 45 ALA 46 GLY 47 LYS 48 GLN 49 LEU 50 GLU 51 ASP 52 GLY 53 ARG 54 THR 55 LEU 56 SER 57 ASP 58 TYR 59 ASN 60 ILE 61 GLN 62 LYS 63 GLU 64 SER 65 THR 66 LEU 67 HIS 68 LEU 69 VAL 70 LEU 71 ARG 72 LEU 73
Unit 10	MET 1 THR 2 THR 3 GLU 4 GLN 5 ARG 6 ARG 7 SER 8 LEU 9 GLN 10 ALA 11 PHE 12 GLN 13 ASP 14 TYR 15 ILE 16 ARG 17 LYS 18 THR 19 LEU 20 ASP 21 PRO 22 THR 23 TYR 24 ILE 25 LEU 26 SER 27 TYR 28 MET 29 ALA 30 PRO 31 TRP 32 PHE 33 ARG 34 GLU 35 GLU 36 GLU 37 VAL 38 GLN 39 TYR 40 ILE 41 GLN 42 ALA 43 GLU 44 LYS 45 ASN 46 ASN 47 LYS 48 GLY 49 PRO 50 MET 51 GLU 52 ALA 53 ALA 54 THR 55 LEU 56 PHE 57 LEU 58 LYS 59 PHE 60 LEU 61 LEU 62 GLU 63 LEU 64 GLN 65 GLU 66 GLU 67 GLY 68 TRP 69 PHE 70 ARG 71 GLY 72 PHE 73 LEU 74 ASP 75 ALA 76 LEU 77 ASP 78 HIS 79 ALA 80 GLY 81 TYR 82 SER 83 GLY 84 LEU 85 TYR 86 GLU 87 ALA 88 ILE 89 GLU 90 SER 91 TRP 92 ASP 93 PHE 94 LYS 95 LYS 96 ILE 97 GLU 98 LYS 99 LEU 100 GLU 101 GLU 102 TYR 103 ARG 104 LEU 105 LEU 106 LEU 107 LYS 108 ARG 109 LEU 110 GLN 111 PRO 112 GLU 113 PHE 114 LYS 115 THR 116 ARG 117 ILE 118 ILE 119 PRO 120 THR 121 ASP 122 ILE 123 ILE 124 SER 125 ASP 126 LEU 127 SER 128 GLU 129 CYS 130 LEU 131 ILE 132 ASN 133 GLN 134 GLU 135 CYS 136 GLU 137 GLU 138 ILE 139 LEU 140 GLN 141 ILE 142 CYS 143 SER 144 THR 145 LYS 146 GLY 147 MET 148 MET 149 ALA 150 GLY 151 ALA 152 GLU 153 LYS 154 LEU 155 VAL 156 GLU 157 CYS 158 LEU 159 LEU 160 ARG 161 SER 162 ASP 163 LYS 164 GLU 165 ASN 166 TRP 167 PRO 168 LYS 169 THR 170 LEU 171 LYS 172 LEU 173 ALA 174 LEU 175 GLU 176 LYS 177 GLU 178 ARG 179 ASN 180 LYS 181 PHE 182 SER 183 GLU 184 LEU 185 TRP 186 ILE 187 VAL 188