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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF DDRB BOUND TO 30B SSDNA
Keywords SINGLE-STRANDED DNA ANNEALING, DNA BINDING PROTEIN-DNA COMPL
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   4NOE     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   SINGLE-STRANDED DNA-BINDING PROTEIN DDRB  A 139 1035 0
2  Protein   SINGLE-STRANDED DNA-BINDING PROTEIN DDRB  B 134 1034 0
3  Protein   SINGLE-STRANDED DNA-BINDING PROTEIN DDRB  C 134 1012 0
4  Protein   SINGLE-STRANDED DNA-BINDING PROTEIN DDRB  D 133 1002 0
5  Protein   SINGLE-STRANDED DNA-BINDING PROTEIN DDRB  E 142 1062 0
6  Other macromolecule   5'-D(*TP*TP*GP*CP*GP*CP*TP*TP*GP*CP*GP*CP*TP*TP*G *TP*TP*GP*CP*GP*CP*TP*TP*GP*CP*GP*CP)-3'  F 30 610 0
7  Ligand   SINGLE-STRANDED DNA-BINDING PROTEIN DDRB  B 1 0 1
8  Ligand   SINGLE-STRANDED DNA-BINDING PROTEIN DDRB  D 1 0 1
9 Water     546 0 546
total       1260 5755 548
Proteins
Unit 1 MET1 LEU2 GLN3 ILE4 GLU5 PHE6 ILE7 THR8 ASP9 LEU10 GLY11 ALA12 ARG13 VAL14 THR15 VAL16 ASN17 VAL18 GLU19 HIS20 GLU21 SER22 ARG23 LEU24 LEU25 ASP26 VAL27 GLN28 ARG29 HIS30 TYR31 GLY32 ARG33 LEU34 GLY35 TRP36 THR37 SER38 GLY39 GLU40 ILE41 PRO42 SER43 GLY44 GLY45 TYR46 GLN47 PHE48 PRO49 ILE50 GLU51 ASN52 GLU53 ALA54 ASP55 PHE56 ASP57 TRP58 SER59 LEU60 ILE61 GLY62 ALA63 ARG64 LYS65 TRP66 LYS67 GLU72 GLU73 LEU74 VAL75 ILE76 HIS77 ARG78 GLY79 HIS80 ALA81 TYR82 ARG83 ARG84 ARG85 GLU86 LEU87 GLU88 ALA89 VAL90 ASP91 SER92 ARG93 LYS94 LEU95 LYS96 LEU97 PRO98 ALA99 ALA100 ILE101 LYS102 TYR103 SER104 ARG105 GLY106 ALA107 LYS108 VAL109 SER110 ASP111 PRO112 GLN113 HIS114 VAL115 ARG116 GLU117 LYS118 ALA119 ASP120 GLY121 ASP122 ILE123 GLU124 TYR125 VAL126 SER127 LEU128 ALA129 ILE130 PHE131 ARG132 GLY133 GLY134 LYS135 ARG136 GLN137 GLU138 ARG139 TYR140 ALA141 VAL142 PRO143
Unit 2 MET1 LEU2 GLN3 ILE4 GLU5 PHE6 ILE7 THR8 ASP9 LEU10 GLY11 ALA12 ARG13 VAL14 THR15 VAL16 ASN17 VAL18 GLU19 HIS20 GLU21 SER22 ARG23 LEU24 LEU25 ASP26 VAL27 GLN28 ARG29 HIS30 TYR31 GLY32 ARG33 LEU34 GLY35 TRP36 THR37 SER38 GLY39 GLU40 ILE41 PRO42 SER43 GLY44 GLY45 TYR46 GLN47 PHE48 PRO49 ILE50 GLU51 ASN52 GLU53 ALA54 ASP55 PHE56 ASP57 TRP58 SER59 LEU60 ILE61 GLY62 ALA63 ARG64 LYS65 TRP66 GLU73 LEU74 VAL75 ILE76 HIS77 ARG78 GLY79 HIS80 ALA81 TYR82 ARG83 ARG84 ARG85 GLU86 LEU87 GLU88 ALA89 VAL90 ASP91 LEU95 LYS96 LEU97 PRO98 ALA99 ALA100 ILE101 LYS102 TYR103 SER104 ARG105 GLY106 ALA107 LYS108 VAL109 SER110 ASP111 PRO112 GLN113 HIS114 VAL115 ARG116 GLU117 LYS118 ALA119 ASP120 GLY121 ASP122 ILE123 GLU124 TYR125 VAL126 SER127 LEU128 ALA129 ILE130 PHE131 ARG132 GLY133 GLY134 LYS135 ARG136 GLN137 GLU138 ARG139 TYR140 ALA141 VAL142 PRO143
Unit 3 THR0 MET1 LEU2 GLN3 ILE4 GLU5 PHE6 ILE7 THR8 ASP9 LEU10 GLY11 ALA12 ARG13 VAL14 THR15 VAL16 ASN17 VAL18 GLU19 HIS20 GLU21 SER22 ARG23 LEU24 LEU25 ASP26 VAL27 GLN28 ARG29 HIS30 TYR31 GLY32 ARG33 LEU34 GLY35 TRP36 THR37 SER38 GLY39 GLU40 ILE41 PRO42 SER43 GLY44 GLY45 TYR46 GLN47 PHE48 PRO49 ILE50 GLU51 ASN52 GLU53 ALA54 ASP55 PHE56 ASP57 TRP58 SER59 LEU60 ILE61 GLY62 ALA63 ARG64 LYS65 TRP66 GLU73 LEU74 VAL75 ILE76 HIS77 ARG78 GLY79 HIS80 ALA81 TYR82 ARG83 ARG84 ARG85 GLU86 LEU87 GLU88 ALA89 VAL90 ASP91 LYS96 LEU97 PRO98 ALA99 ALA100 ILE101 LYS102 TYR103 SER104 ARG105 GLY106 ALA107 LYS108 VAL109 SER110 ASP111 PRO112 GLN113 HIS114 VAL115 ARG116 GLU117 LYS118 ALA119 ASP120 GLY121 ASP122 ILE123 GLU124 TYR125 VAL126 SER127 LEU128 ALA129 ILE130 PHE131 ARG132 GLY133 GLY134 LYS135 ARG136 GLN137 GLU138 ARG139 TYR140 ALA141 VAL142 PRO143
Unit 4 PHE-1 THR0 MET1 LEU2 GLN3 ILE4 GLU5 PHE6 ILE7 THR8 ASP9 LEU10 GLY11 ALA12 ARG13 VAL14 THR15 VAL16 ASN17 VAL18 GLU19 HIS20 GLU21 SER22 ARG23 LEU24 LEU25 ASP26 VAL27 GLN28 ARG29 HIS30 TYR31 GLY32 ARG33 LEU34 GLY35 TRP36 THR37 SER38 GLY39 GLU40 ILE41 PRO42 SER43 GLY44 GLY45 TYR46 GLN47 PHE48 PRO49 ILE50 GLU51 ASN52 GLU53 ALA54 ASP55 PHE56 ASP57 TRP58 SER59 LEU60 ILE61 GLY62 ALA63 ARG64 LYS65 TRP66 GLU73 LEU74 VAL75 ILE76 HIS77 ARG78 GLY79 HIS80 ALA81 TYR82 ARG83 ARG84 ARG85 GLU86 LEU87 GLU88 ALA89 VAL90 LEU97 PRO98 ALA99 ALA100 ILE101 LYS102 TYR103 SER104 ARG105 GLY106 ALA107 LYS108 VAL109 SER110 ASP111 PRO112 GLN113 HIS114 VAL115 ARG116 GLU117 LYS118 ALA119 ASP120 GLY121 ASP122 ILE123 GLU124 TYR125 VAL126 SER127 LEU128 ALA129 ILE130 PHE131 ARG132 GLY133 GLY134 LYS135 ARG136 GLN137 GLU138 ARG139 TYR140 ALA141 VAL142 PRO143
Unit 5 PHE-1 THR0 MET1 LEU2 GLN3 ILE4 GLU5 PHE6 ILE7 THR8 ASP9 LEU10 GLY11 ALA12 ARG13 VAL14 THR15 VAL16 ASN17 VAL18 GLU19 HIS20 GLU21 SER22 ARG23 LEU24 LEU25 ASP26 VAL27 GLN28 ARG29 HIS30 TYR31 GLY32 ARG33 LEU34 GLY35 TRP36 THR37 SER38 GLY39 GLU40 ILE41 PRO42 SER43 GLY44 GLY45 TYR46 GLN47 PHE48 PRO49 ILE50 GLU51 ASN52 GLU53 ALA54 ASP55 PHE56 ASP57 TRP58 SER59 LEU60 ILE61 GLY62 ALA63 ARG64 LYS65 TRP66 LYS67 SER68 PRO69 GLU70 GLY71 GLU72 GLU73 LEU74 VAL75 ILE76 HIS77 ARG78 GLY79 HIS80 ALA81 TYR82 ARG83 ARG84 ARG85 GLU86 LEU87 GLU88 ALA89 VAL90 ASP91 LEU95 LYS96 LEU97 PRO98 ALA99 ALA100 ILE101 LYS102 TYR103 SER104 ARG105 GLY106 ALA107 LYS108 VAL109 SER110 ASP111 PRO112 GLN113 HIS114 VAL115 ARG116 GLU117 LYS118 ALA119 ASP120 GLY121 ASP122 ILE123 GLU124 TYR125 VAL126 SER127 LEU128 ALA129 ILE130 PHE131 ARG132 GLY133 GLY134 LYS135 ARG136 GLN137 GLU138 ARG139 TYR140 ALA141 VAL142 PRO143
Other macromolecules
Unit 6 DT1 DT2 DG3 DC4 DG5 DC6 DT7 DT8 DG9 DC10 DG11 DC12 DT13 DT14 DG15 DC16 DG17 DC18 DT19 DT20 DG21 DC22 DG23 DC24 DT25 DT26 DG27 DC28 DG29 DC30
Ligands
Unit 7 CA201
Unit 8 CA201
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany