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Title | CRYSTAL STRUCTURE OF THE LACTATE DEHYDROGENASE FROM CRYPTOSP PARVUM COMPLEXED WITH SUBSTRATE (PYRUVIC ACID) AND COFACTOR NICOTINAMIDE ADENINE DINUCLEOTIDE) | |
Keywords | ROSSMANN FOLD, DEHYDROGENASE, NAD BINDING, OXIDOREDUCTASE | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 4ND4 | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Protein | LACTATE DEHYDROGENASE, ADJACENT GENE ENCODES PRED MALATE DEHYDROGENASE | A | 317 | 2354 | 0 |
2 | Protein | LACTATE DEHYDROGENASE, ADJACENT GENE ENCODES PRED MALATE DEHYDROGENASE | B | 317 | 2354 | 0 |
3 | Ligand | LACTATE DEHYDROGENASE, ADJACENT GENE ENCODES PRED MALATE DEHYDROGENASE | A | 5 | 0 | 68 |
4 | Ligand | LACTATE DEHYDROGENASE, ADJACENT GENE ENCODES PRED MALATE DEHYDROGENASE | B | 4 | 0 | 62 |
5 | Water | 259 | 0 | 259 | ||
total | 902 | 4708 | 389 |
Unit 1 | MET17 ILE18 GLU19 ARG20 ARG22 LYS23 ILE24 ALA25 VAL26 ILE27 GLY28 SER29 GLY30 GLN31 ILE32 GLY33 GLY34 ASN35 ILE36 ALA37 TYR38 ILE39 VAL40 GLY41 LYS42 ASP43 ASN44 LEU45 ALA46 ASP48 VAL49 VAL50 LEU51 PHE52 ASP53 ILE54 ALA55 GLU56 GLY57 ILE58 PRO59 GLN60 GLY61 LYS62 ALA63 LEU64 ASP65 ILE66 THR67 HIS68 SER69 MET70 VAL71 MET72 PHE73A GLY73B SER74 THR75 SER76 LYS77 VAL78 ILE79 GLY80 THR81 ASN83 ASP84 TYR85 ALA86 ASP87 ILE88 SER89 GLY90 SER91 ASP92 VAL93 VAL94 ILE95 ILE96 THR97 ALA98 SER99 ILE100 PRO101 GLY102 ARG103 PRO105 LYS106 ASP107 ASP108 ARG109 SER110 GLU111 LEU112 LEU113 PHE114 GLY115 ASN116 ALA117 ARG118 ILE119 LEU120 ASP121 SER122 VAL123 ALA124 GLU125 GLY126 VAL127 LYS128 LYS129 TYR130 CYS131 PRO132A ASN132B ALA133 PHE134 VAL135 ILE136 CYS137 ILE138 THR139 ASN140 PRO141 LEU142 ASP143 VAL144 MET145 VAL146 SER147 HIS148 PHE149 GLN150 LYS151 VAL152 SER153 GLY154 LEU155 PRO156 HIS157 ASN158 LYS159 VAL160 CYS161 GLY162 MET163 ALA164 GLY165 VAL166 LEU167 ASP168 SER169 SER170 ARG171 PHE172 ARG173 THR174 PHE175 ILE176 ALA177 GLN178 HIS179 PHE180 GLY181 VAL182 ASN183 ALA184 SER185 ASP186 VAL187 SER188 ALA189 ASN190 VAL191 ILE192 GLY193 GLY194 HIS195 GLY196 ASP197 GLY198 MET199 VAL200 PRO201 ALA202 THR203 SER204 SER205 VAL206 SER207 VAL208 GLY209A GLY209B VAL210A PRO210B LEU212 SER213 SER214 PHE215 ILE216 LYS217 GLN218A GLY218B LEU219 ILE220 THR221 GLN222 GLU223 GLN224 ILE225 ASP226 GLU227 ILE228 VAL229 CYS230 HIS231 THR232 ARG233 ILE234 ALA235 TRP236 LYS237 GLU238 VAL239 ALA240 ASP241 ASN242 LEU243 LYS244A THR244B GLY244C THR245 ALA246 TYR247 PHE248 ALA249 PRO250 ALA251 ALA252 ALA253 ALA254 VAL255 LYS256 MET257 ALA258 GLU259 ALA260 TYR261 LEU262 LYS263 ASP264 LYS265 LYS266 ALA267 VAL268 VAL269 PRO270 CYS271 SER272 ALA273 PHE274 CYS275 SER276 ASN277 HIS278 TYR279 GLY280 VAL281 LYS282 GLY283 ILE285 TYR286 MET287 GLY288 VAL289 PRO290 THR291 ILE292 ILE293 GLY294 LYS295 ASN296 GLY297 VAL298 GLU299 ASP301 ILE302 LEU303 GLU304 LEU305 ASP306 LEU307 THR308 PRO309 LEU310 GLU311 GLN312 LYS313 LEU314 LEU315 GLY316 GLU317 SER318 ILE319 ASN320 GLU321 VAL322 ASN323 THR324 ILE325 SER326 LYS327 VAL328 LEU329 ASP330 ASN331 ALA332 PRO333 |
Unit 2 | MET17 ILE18 GLU19 ARG20 ARG22 LYS23 ILE24 ALA25 VAL26 ILE27 GLY28 SER29 GLY30 GLN31 ILE32 GLY33 GLY34 ASN35 ILE36 ALA37 TYR38 ILE39 VAL40 GLY41 LYS42 ASP43 ASN44 LEU45 ALA46 ASP48 VAL49 VAL50 LEU51 PHE52 ASP53 ILE54 ALA55 GLU56 GLY57 ILE58 PRO59 GLN60 GLY61 LYS62 ALA63 LEU64 ASP65 ILE66 THR67 HIS68 SER69 MET70 VAL71 MET72 PHE73A GLY73B SER74 THR75 SER76 LYS77 VAL78 ILE79 GLY80 THR81 ASN83 ASP84 TYR85 ALA86 ASP87 ILE88 SER89 GLY90 SER91 ASP92 VAL93 VAL94 ILE95 ILE96 THR97 ALA98 SER99 ILE100 PRO101 GLY102 ARG103 PRO105 LYS106 ASP107 ASP108 ARG109 SER110 GLU111 LEU112 LEU113 PHE114 GLY115 ASN116 ALA117 ARG118 ILE119 LEU120 ASP121 SER122 VAL123 ALA124 GLU125 GLY126 VAL127 LYS128 LYS129 TYR130 CYS131 PRO132A ASN132B ALA133 PHE134 VAL135 ILE136 CYS137 ILE138 THR139 ASN140 PRO141 LEU142 ASP143 VAL144 MET145 VAL146 SER147 HIS148 PHE149 GLN150 LYS151 VAL152 SER153 GLY154 LEU155 PRO156 HIS157 ASN158 LYS159 VAL160 CYS161 GLY162 MET163 ALA164 GLY165 VAL166 LEU167 ASP168 SER169 SER170 ARG171 PHE172 ARG173 THR174 PHE175 ILE176 ALA177 GLN178 HIS179 PHE180 GLY181 VAL182 ASN183 ALA184 SER185 ASP186 VAL187 SER188 ALA189 ASN190 VAL191 ILE192 GLY193 GLY194 HIS195 GLY196 ASP197 GLY198 MET199 VAL200 PRO201 ALA202 THR203 SER204 SER205 VAL206 SER207 VAL208 GLY209A GLY209B VAL210A PRO210B LEU212 SER213 SER214 PHE215 ILE216 LYS217 GLN218A GLY218B LEU219 ILE220 THR221 GLN222 GLU223 GLN224 ILE225 ASP226 GLU227 ILE228 VAL229 CYS230 HIS231 THR232 ARG233 ILE234 ALA235 TRP236 LYS237 GLU238 VAL239 ALA240 ASP241 ASN242 LEU243 LYS244A THR244B GLY244C THR245 ALA246 TYR247 PHE248 ALA249 PRO250 ALA251 ALA252 ALA253 ALA254 VAL255 LYS256 MET257 ALA258 GLU259 ALA260 TYR261 LEU262 LYS263 ASP264 LYS265 LYS266 ALA267 VAL268 VAL269 PRO270 CYS271 SER272 ALA273 PHE274 CYS275 SER276 ASN277 HIS278 TYR279 GLY280 VAL281 LYS282 GLY283 ILE285 TYR286 MET287 GLY288 VAL289 PRO290 THR291 ILE292 ILE293 GLY294 LYS295 ASN296 GLY297 VAL298 GLU299 ASP301 ILE302 LEU303 GLU304 LEU305 ASP306 LEU307 THR308 PRO309 LEU310 GLU311 GLN312 LYS313 LEU314 LEU315 GLY316 GLU317 SER318 ILE319 ASN320 GLU321 VAL322 ASN323 THR324 ILE325 SER326 LYS327 VAL328 LEU329 ASP330 ASN331 ALA332 PRO333 |
Unit 3 | NAD401 PYR402 GOL403 GOL404 GOL405 |
Unit 4 | NAD401 PYR402 GOL403 GOL404 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |