4ND3 - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF THE LACTATE DEHYDROGENASE FROM CRYPTOSP PARVUM COMPLEXED WITH SUBSTRATE (L-LACTIC ACID) AND COFACTO NICOTINAMIDE ADENINE DINUCLEOTIDE)
• Keywords: ROSSMANN FOLD, OXIDOREDUCTASE, NAD BINDING
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	4ND3	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	LACTATE DEHYDROGENASE, ADJACENT GENE ENCODES PRED MALATE DEHYDROGENASE	A	317	2354	0
2	Protein	LACTATE DEHYDROGENASE, ADJACENT GENE ENCODES PRED MALATE DEHYDROGENASE	B	317	2354	0
3	Ligand	LACTATE DEHYDROGENASE, ADJACENT GENE ENCODES PRED MALATE DEHYDROGENASE	A	4	0	62
4	Ligand	LACTATE DEHYDROGENASE, ADJACENT GENE ENCODES PRED MALATE DEHYDROGENASE	B	2	0	50
5	Water			206	0	206
total				846	4708	318

Proteins

Unit 1

MET 17 ILE 18 GLU 19 ARG 20 ARG 22 LYS 23 ILE 24 ALA 25 VAL 26 ILE 27 GLY 28 SER 29 GLY 30 GLN 31 ILE 32 GLY 33 GLY 34 ASN 35 ILE 36 ALA 37 TYR 38 ILE 39 VAL 40 GLY 41 LYS 42 ASP 43 ASN 44 LEU 45 ALA 46 ASP 48 VAL 49 VAL 50 LEU 51 PHE 52 ASP 53 ILE 54 ALA 55 GLU 56 GLY 57 ILE 58 PRO 59 GLN 60 GLY 61 LYS 62 ALA 63 LEU 64 ASP 65 ILE 66 THR 67 HIS 68 SER 69 MET 70 VAL 71 MET 72 PHE 73A GLY 73B SER 74 THR 75 SER 76 LYS 77 VAL 78 ILE 79 GLY 80 THR 81 ASN 83 ASP 84 TYR 85 ALA 86 ASP 87 ILE 88 SER 89 GLY 90 SER 91 ASP 92 VAL 93 VAL 94 ILE 95 ILE 96 THR 97 ALA 98 SER 99 ILE 100 PRO 101 GLY 102 ARG 103 PRO 105 LYS 106 ASP 107 ASP 108 ARG 109 SER 110 GLU 111 LEU 112 LEU 113 PHE 114 GLY 115 ASN 116 ALA 117 ARG 118 ILE 119 LEU 120 ASP 121 SER 122 VAL 123 ALA 124 GLU 125 GLY 126 VAL 127 LYS 128 LYS 129 TYR 130 CYS 131 PRO 132A ASN 132B ALA 133 PHE 134 VAL 135 ILE 136 CYS 137 ILE 138 THR 139 ASN 140 PRO 141 LEU 142 ASP 143 VAL 144 MET 145 VAL 146 SER 147 HIS 148 PHE 149 GLN 150 LYS 151 VAL 152 SER 153 GLY 154 LEU 155 PRO 156 HIS 157 ASN 158 LYS 159 VAL 160 CYS 161 GLY 162 MET 163 ALA 164 GLY 165 VAL 166 LEU 167 ASP 168 SER 169 SER 170 ARG 171 PHE 172 ARG 173 THR 174 PHE 175 ILE 176 ALA 177 GLN 178 HIS 179 PHE 180 GLY 181 VAL 182 ASN 183 ALA 184 SER 185 ASP 186 VAL 187 SER 188 ALA 189 ASN 190 VAL 191 ILE 192 GLY 193 GLY 194 HIS 195 GLY 196 ASP 197 GLY 198 MET 199 VAL 200 PRO 201 ALA 202 THR 203 SER 204 SER 205 VAL 206 SER 207 VAL 208 GLY 209A GLY 209B VAL 210A PRO 210B LEU 212 SER 213 SER 214 PHE 215 ILE 216 LYS 217 GLN 218A GLY 218B LEU 219 ILE 220 THR 221 GLN 222 GLU 223 GLN 224 ILE 225 ASP 226 GLU 227 ILE 228 VAL 229 CYS 230 HIS 231 THR 232 ARG 233 ILE 234 ALA 235 TRP 236 LYS 237 GLU 238 VAL 239 ALA 240 ASP 241 ASN 242 LEU 243 LYS 244A THR 244B GLY 244C THR 245 ALA 246 TYR 247 PHE 248 ALA 249 PRO 250 ALA 251 ALA 252 ALA 253 ALA 254 VAL 255 LYS 256 MET 257 ALA 258 GLU 259 ALA 260 TYR 261 LEU 262 LYS 263 ASP 264 LYS 265 LYS 266 ALA 267 VAL 268 VAL 269 PRO 270 CYS 271 SER 272 ALA 273 PHE 274 CYS 275 SER 276 ASN 277 HIS 278 TYR 279 GLY 280 VAL 281 LYS 282 GLY 283 ILE 285 TYR 286 MET 287 GLY 288 VAL 289 PRO 290 THR 291 ILE 292 ILE 293 GLY 294 LYS 295 ASN 296 GLY 297 VAL 298 GLU 299 ASP 301 ILE 302 LEU 303 GLU 304 LEU 305 ASP 306 LEU 307 THR 308 PRO 309 LEU 310 GLU 311 GLN 312 LYS 313 LEU 314 LEU 315 GLY 316 GLU 317 SER 318 ILE 319 ASN 320 GLU 321 VAL 322 ASN 323 THR 324 ILE 325 SER 326 LYS 327 VAL 328 LEU 329 ASP 330 ASN 331 ALA 332 PRO 333

Unit 2

MET 17 ILE 18 GLU 19 ARG 20 ARG 22 LYS 23 ILE 24 ALA 25 VAL 26 ILE 27 GLY 28 SER 29 GLY 30 GLN 31 ILE 32 GLY 33 GLY 34 ASN 35 ILE 36 ALA 37 TYR 38 ILE 39 VAL 40 GLY 41 LYS 42 ASP 43 ASN 44 LEU 45 ALA 46 ASP 48 VAL 49 VAL 50 LEU 51 PHE 52 ASP 53 ILE 54 ALA 55 GLU 56 GLY 57 ILE 58 PRO 59 GLN 60 GLY 61 LYS 62 ALA 63 LEU 64 ASP 65 ILE 66 THR 67 HIS 68 SER 69 MET 70 VAL 71 MET 72 PHE 73A GLY 73B SER 74 THR 75 SER 76 LYS 77 VAL 78 ILE 79 GLY 80 THR 81 ASN 83 ASP 84 TYR 85 ALA 86 ASP 87 ILE 88 SER 89 GLY 90 SER 91 ASP 92 VAL 93 VAL 94 ILE 95 ILE 96 THR 97 ALA 98 SER 99 ILE 100 PRO 101 GLY 102 ARG 103 PRO 105 LYS 106 ASP 107 ASP 108 ARG 109 SER 110 GLU 111 LEU 112 LEU 113 PHE 114 GLY 115 ASN 116 ALA 117 ARG 118 ILE 119 LEU 120 ASP 121 SER 122 VAL 123 ALA 124 GLU 125 GLY 126 VAL 127 LYS 128 LYS 129 TYR 130 CYS 131 PRO 132A ASN 132B ALA 133 PHE 134 VAL 135 ILE 136 CYS 137 ILE 138 THR 139 ASN 140 PRO 141 LEU 142 ASP 143 VAL 144 MET 145 VAL 146 SER 147 HIS 148 PHE 149 GLN 150 LYS 151 VAL 152 SER 153 GLY 154 LEU 155 PRO 156 HIS 157 ASN 158 LYS 159 VAL 160 CYS 161 GLY 162 MET 163 ALA 164 GLY 165 VAL 166 LEU 167 ASP 168 SER 169 SER 170 ARG 171 PHE 172 ARG 173 THR 174 PHE 175 ILE 176 ALA 177 GLN 178 HIS 179 PHE 180 GLY 181 VAL 182 ASN 183 ALA 184 SER 185 ASP 186 VAL 187 SER 188 ALA 189 ASN 190 VAL 191 ILE 192 GLY 193 GLY 194 HIS 195 GLY 196 ASP 197 GLY 198 MET 199 VAL 200 PRO 201 ALA 202 THR 203 SER 204 SER 205 VAL 206 SER 207 VAL 208 GLY 209A GLY 209B VAL 210A PRO 210B LEU 212 SER 213 SER 214 PHE 215 ILE 216 LYS 217 GLN 218A GLY 218B LEU 219 ILE 220 THR 221 GLN 222 GLU 223 GLN 224 ILE 225 ASP 226 GLU 227 ILE 228 VAL 229 CYS 230 HIS 231 THR 232 ARG 233 ILE 234 ALA 235 TRP 236 LYS 237 GLU 238 VAL 239 ALA 240 ASP 241 ASN 242 LEU 243 LYS 244A THR 244B GLY 244C THR 245 ALA 246 TYR 247 PHE 248 ALA 249 PRO 250 ALA 251 ALA 252 ALA 253 ALA 254 VAL 255 LYS 256 MET 257 ALA 258 GLU 259 ALA 260 TYR 261 LEU 262 LYS 263 ASP 264 LYS 265 LYS 266 ALA 267 VAL 268 VAL 269 PRO 270 CYS 271 SER 272 ALA 273 PHE 274 CYS 275 SER 276 ASN 277 HIS 278 TYR 279 GLY 280 VAL 281 LYS 282 GLY 283 ILE 285 TYR 286 MET 287 GLY 288 VAL 289 PRO 290 THR 291 ILE 292 ILE 293 GLY 294 LYS 295 ASN 296 GLY 297 VAL 298 GLU 299 ASP 301 ILE 302 LEU 303 GLU 304 LEU 305 ASP 306 LEU 307 THR 308 PRO 309 LEU 310 GLU 311 GLN 312 LYS 313 LEU 314 LEU 315 GLY 316 GLU 317 SER 318 ILE 319 ASN 320 GLU 321 VAL 322 ASN 323 THR 324 ILE 325 SER 326 LYS 327 VAL 328 LEU 329 ASP 330 ASN 331 ALA 332 PRO 333

Ligands

Unit 3	NAD 401 2OP 402 GOL 403 GOL 404
Unit 4	NAD 401 GOL 402