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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF HEMAGGLUTININ FROM AN H7N9 INFLUENZA VI
Keywords VIRAL ENVELOPE PROTEIN, HEMAGGLUTININ, VIRAL FUSION PROTEIN, PROTEIN
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   4N5J     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   HEMAGGLUTININ HA1  A 318 2427 0
2  Protein   HEMAGGLUTININ HA2  B 169 1373 0
3  Protein   HEMAGGLUTININ HA1  C 317 2419 0
4  Protein   HEMAGGLUTININ HA2  D 161 1319 0
5  Ligand    E 3 0 39
6  Ligand   HEMAGGLUTININ HA1  A 1 0 14
7  Ligand   HEMAGGLUTININ HA2  B 1 0 14
8 Water     59 0 59
total       1029 7538 126
Proteins
Unit 1 ASP11 LYS12 ILE13 CYS14 LEU15 GLY16 HIS17 HIS18 ALA19 VAL20 SER21 ASN22 GLY23 THR24 LYS25 VAL26 ASN27 THR28 LEU29 THR30 GLU31 ARG32 GLY33 VAL34 GLU35 VAL36 VAL37 ASN38 ALA39 THR40 GLU41 THR42 VAL43 GLU44 ARG45 THR46 ASN47 ILE48 PRO49 ARG50 ILE51 CYS52 SER53 LYS54 GLY55 LYS56 ARG57 THR58 VAL59 ASP60 LEU61 GLY62 GLN63 CYS64 GLY65 LEU66 LEU67 GLY68 THR69 ILE70 THR71 GLY72 PRO73 PRO74 GLN75 CYS76 ASP77 GLN78 PHE79 LEU80 GLU81 PHE82 SER83 ALA84 ASP85 LEU86 ILE87 ILE88 GLU89 ARG90 ARG91 GLU92 GLY93 SER94 ASP95 VAL96 CYS97 TYR98 PRO99 GLY100 LYS101 PHE102 VAL103 ASN104 GLU105 GLU106 ALA107 LEU108 ARG109 GLN110 ILE111 LEU112 ARG113 GLU114 SER115 GLY116 GLY117 ILE118 ASP119 LYS120 GLU121 ALA122 MET123 GLY124 PHE125 THR126 TYR127 SER128 GLY129 ILE130 ARG131 THR132 ASN133 GLY134 ALA135 THR136 SER137 ALA138 CYS139 ARG140 ARG141 SER143 GLY144 SER145 SER146 PHE147 TYR148 ALA149 GLU150 MET151 LYS152 TRP153 LEU154 LEU155 SER156 ASN157 THR158 ASP158A ASN158B ALA159 ALA160 PHE161 PRO162 GLN163 MET164 THR165 LYS166 SER167 TYR168 LYS169 ASN170 THR171 ARG172 LYS173 SER174 PRO175 ALA176 LEU177 ILE178 VAL179 TRP180 GLY181 ILE182 HIS183 HIS184 SER185 VAL186 SER187 THR188 ALA189 GLU190 GLN191 THR192 LYS193 LEU194 TYR195 GLY196 SER197 GLY198 ASN199 LYS200 LEU201 VAL202 THR203 VAL204 GLY205 SER206 SER207 ASN208 TYR209 GLN210 GLN211 SER212 PHE213 VAL214 PRO215 SER216 PRO217 GLY218 ALA219 ARG220 PRO221 GLN222 VAL223 ASN224 GLY225 LEU226 SER227 GLY228 ARG229 ILE230 ASP231 PHE232 HIS233 TRP234 LEU235 MET236 LEU237 ASN238 PRO239 ASN240 ASP241 THR242 VAL243 THR244 PHE245 SER246 PHE247 ASN248 GLY249 ALA250 PHE251 ILE252 ALA253 PRO254 ASP255 ARG256 ALA257 SER258 PHE259 LEU260 ARG261 GLY262 LYS263 SER265 MET266 GLY267 ILE268 GLN269 SER270 GLY271 VAL272 GLN273 VAL274 ASP275 ALA276 ASN276A CYS277 GLU278 GLY279 ASP280 CYS281 TYR282 HIS283 SER284 GLY285 GLY286 THR287 ILE288 ILE289 SER290 ASN291 LEU292 PRO293 PHE294 GLN295 ASN296 ILE297 ASP298 SER299 ARG300 ALA301 VAL302 GLY303 LYS304 CYS305 PRO306 ARG307 TYR308 VAL309 LYS310 GLN311 ARG312 SER313 LEU314 LEU315 LEU316 ALA317 THR318 GLY319 MET320 LYS321 ASN322 VAL323 PRO324 GLU325 ILE326 PRO327
Unit 2 GLY4 ALA5 ILE6 ALA7 GLY8 PHE9 ILE10 GLU11 ASN12 GLY13 TRP14 GLU15 GLY16 LEU17 ILE18 ASP19 GLY20 TRP21 TYR22 GLY23 PHE24 ARG25 HIS26 GLN27 ASN28 ALA29 GLN30 GLY31 GLU32 GLY33 THR34 ALA35 ALA36 ASP37 TYR38 LYS39 SER40 THR41 GLN42 SER43 ALA44 ILE45 ASP46 GLN47 ILE48 THR49 GLY50 LYS51 LEU52 ASN53 ARG54 LEU55 ILE56 GLU57 LYS58 THR59 ASN60 GLN61 GLN62 PHE63 GLU64 LEU65 ILE66 ASP67 ASN68 GLU69 PHE70 ASN71 GLU72 VAL73 GLU74 LYS75 GLN76 ILE77 GLY78 ASN79 VAL80 ILE81 ASN82 TRP83 THR84 ARG85 ASP86 SER87 ILE88 THR89 GLU90 VAL91 TRP92 SER93 TYR94 ASN95 ALA96 GLU97 LEU98 LEU99 VAL100 ALA101 MET102 GLU103 ASN104 GLN105 HIS106 THR107 ILE108 ASP109 LEU110 ALA111 ASP112 SER113 GLU114 MET115 ASP116 LYS117 LEU118 TYR119 GLU120 ARG121 VAL122 LYS123 ARG124 GLN125 LEU126 ARG127 GLU128 ASN129 ALA130 GLU131 GLU132 ASP133 GLY134 THR135 GLY136 CYS137 PHE138 GLU139 ILE140 PHE141 HIS142 LYS143 CYS144 ASP145 ASP146 ASP147 CYS148 MET149 ALA150 SER151 ILE152 ARG153 ASN154 ASN155 THR156 TYR157 ASP158 HIS159 SER160 LYS161 TYR162 ARG163 GLU164 GLU165 ALA166 MET167 GLN168 ASN169 ARG170 ILE171 GLN172
Unit 3 LYS12 ILE13 CYS14 LEU15 GLY16 HIS17 HIS18 ALA19 VAL20 SER21 ASN22 GLY23 THR24 LYS25 VAL26 ASN27 THR28 LEU29 THR30 GLU31 ARG32 GLY33 VAL34 GLU35 VAL36 VAL37 ASN38 ALA39 THR40 GLU41 THR42 VAL43 GLU44 ARG45 THR46 ASN47 ILE48 PRO49 ARG50 ILE51 CYS52 SER53 LYS54 GLY55 LYS56 ARG57 THR58 VAL59 ASP60 LEU61 GLY62 GLN63 CYS64 GLY65 LEU66 LEU67 GLY68 THR69 ILE70 THR71 GLY72 PRO73 PRO74 GLN75 CYS76 ASP77 GLN78 PHE79 LEU80 GLU81 PHE82 SER83 ALA84 ASP85 LEU86 ILE87 ILE88 GLU89 ARG90 ARG91 GLU92 GLY93 SER94 ASP95 VAL96 CYS97 TYR98 PRO99 GLY100 LYS101 PHE102 VAL103 ASN104 GLU105 GLU106 ALA107 LEU108 ARG109 GLN110 ILE111 LEU112 ARG113 GLU114 SER115 GLY116 GLY117 ILE118 ASP119 LYS120 GLU121 ALA122 MET123 GLY124 PHE125 THR126 TYR127 SER128 GLY129 ILE130 ARG131 THR132 ASN133 GLY134 ALA135 THR136 SER137 ALA138 CYS139 ARG140 ARG141 SER143 GLY144 SER145 SER146 PHE147 TYR148 ALA149 GLU150 MET151 LYS152 TRP153 LEU154 LEU155 SER156 ASN157 THR158 ASP158A ASN158B ALA159 ALA160 PHE161 PRO162 GLN163 MET164 THR165 LYS166 SER167 TYR168 LYS169 ASN170 THR171 ARG172 LYS173 SER174 PRO175 ALA176 LEU177 ILE178 VAL179 TRP180 GLY181 ILE182 HIS183 HIS184 SER185 VAL186 SER187 THR188 ALA189 GLU190 GLN191 THR192 LYS193 LEU194 TYR195 GLY196 SER197 GLY198 ASN199 LYS200 LEU201 VAL202 THR203 VAL204 GLY205 SER206 SER207 ASN208 TYR209 GLN210 GLN211 SER212 PHE213 VAL214 PRO215 SER216 PRO217 GLY218 ALA219 ARG220 PRO221 GLN222 VAL223 ASN224 GLY225 LEU226 SER227 GLY228 ARG229 ILE230 ASP231 PHE232 HIS233 TRP234 LEU235 MET236 LEU237 ASN238 PRO239 ASN240 ASP241 THR242 VAL243 THR244 PHE245 SER246 PHE247 ASN248 GLY249 ALA250 PHE251 ILE252 ALA253 PRO254 ASP255 ARG256 ALA257 SER258 PHE259 LEU260 ARG261 GLY262 LYS263 SER265 MET266 GLY267 ILE268 GLN269 SER270 GLY271 VAL272 GLN273 VAL274 ASP275 ALA276 ASN276A CYS277 GLU278 GLY279 ASP280 CYS281 TYR282 HIS283 SER284 GLY285 GLY286 THR287 ILE288 ILE289 SER290 ASN291 LEU292 PRO293 PHE294 GLN295 ASN296 ILE297 ASP298 SER299 ARG300 ALA301 VAL302 GLY303 LYS304 CYS305 PRO306 ARG307 TYR308 VAL309 LYS310 GLN311 ARG312 SER313 LEU314 LEU315 LEU316 ALA317 THR318 GLY319 MET320 LYS321 ASN322 VAL323 PRO324 GLU325 ILE326 PRO327
Unit 4 PHE9 ILE10 GLU11 ASN12 GLY13 TRP14 GLU15 GLY16 LEU17 ILE18 ASP19 GLY20 TRP21 TYR22 GLY23 PHE24 ARG25 HIS26 GLN27 ASN28 ALA29 GLN30 GLY31 GLU32 GLY33 THR34 ALA35 ALA36 ASP37 TYR38 LYS39 SER40 THR41 GLN42 SER43 ALA44 ILE45 ASP46 GLN47 ILE48 THR49 GLY50 LYS51 LEU52 ASN53 ARG54 LEU55 ILE56 GLU57 LYS58 THR59 ASN60 GLN61 GLN62 PHE63 GLU64 LEU65 ILE66 ASP67 ASN68 GLU69 PHE70 ASN71 GLU72 VAL73 GLU74 LYS75 GLN76 ILE77 GLY78 ASN79 VAL80 ILE81 ASN82 TRP83 THR84 ARG85 ASP86 SER87 ILE88 THR89 GLU90 VAL91 TRP92 SER93 TYR94 ASN95 ALA96 GLU97 LEU98 LEU99 VAL100 ALA101 MET102 GLU103 ASN104 GLN105 HIS106 THR107 ILE108 ASP109 LEU110 ALA111 ASP112 SER113 GLU114 MET115 ASP116 LYS117 LEU118 TYR119 GLU120 ARG121 VAL122 LYS123 ARG124 GLN125 LEU126 ARG127 GLU128 ASN129 ALA130 GLU131 GLU132 ASP133 GLY134 THR135 GLY136 CYS137 PHE138 GLU139 ILE140 PHE141 HIS142 LYS143 CYS144 ASP145 ASP146 ASP147 CYS148 MET149 ALA150 SER151 ILE152 ARG153 ASN154 ASN155 THR156 TYR157 ASP158 HIS159 SER160 LYS161 TYR162 ARG163 GLU164 GLU165 ALA166 MET167 GLN168 ASN169
Ligands
Unit 5 NAG1 NAG2 BMA3
Unit 6 NAG404
Unit 7 NAG201
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany