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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE OF LYMPHOTOXIN ALPHA BOUND TO ANTI-LTA FAB
Keywords TNF, TUMOR NECROSIS FACTOR, TNFR RECEPTOR, LYMPHOTOXIN BETA LYMPHOTOXIN ALPHA, LYMPHOID DEVELOPMENT, TUMOR IMMUNITY, AU IMMUNITY, CYTOKINE-IMMUNE SYSTEM COMPLEX
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4MXV     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   LYMPHOTOXIN-ALPHA  A 137 1075 0
2  Protein   LYMPHOTOXIN-ALPHA  B 137 1072 0
3  Protein   LYMPHOTOXIN-ALPHA  D 132 1029 0
4  Protein   ANTI-LYMPHOTOXIN ALPHA ANTIBODY LIGHT CHAIN  E 211 1622 0
5  Protein   ANTI-LYMPHOTOXIN ALPHA ANTIBODY HEAVY CHAIN  F 213 1613 0
6  Protein   ANTI-LYMPHOTOXIN ALPHA ANTIBODY LIGHT CHAIN  L 211 1622 0
7  Protein   ANTI-LYMPHOTOXIN ALPHA ANTIBODY HEAVY CHAIN  H 213 1613 0
8  Protein   ANTI-LYMPHOTOXIN ALPHA ANTIBODY LIGHT CHAIN  X 211 1622 0
9  Protein   ANTI-LYMPHOTOXIN ALPHA ANTIBODY HEAVY CHAIN  Y 213 1613 0
total       1678 12881 0

Proteins
Unit 1 LYS28 PRO29 ALA30 ALA31 HIS32 LEU33 ILE34 GLY35 ASP36 PRO37 SER38 LYS39 GLN40 ASN41 SER42 LEU43 LEU44 TRP45 ARG46 ALA47 ASN48 THR49 ASP50 ARG51 ALA52 PHE53 LEU54 GLN55 ASP56 GLY57 PHE58 SER59 LEU60 SER61 ASN62 ASN63 SER64 LEU65 LEU66 VAL67 PRO68 THR69 SER70 GLY71 ILE72 TYR73 PHE74 VAL75 TYR76 SER77 GLN78 VAL79 VAL80 PHE81 SER82 GLY83 LYS84 SER92 SER93 PRO94 LEU95 TYR96 LEU97 ALA98 HIS99 GLU100 VAL101 GLN102 LEU103 PHE104 SER105 SER106 GLN107 TYR108 PRO109 PHE110 HIS111 VAL112 PRO113 LEU114 LEU115 SER116 SER117 GLN118 LYS119 MET120 VAL121 TYR122 PRO123 GLY124 LEU125 GLN126 GLU127 PRO128 TRP129 LEU130 HIS131 SER132 MET133 TYR134 HIS135 GLY136 ALA137 ALA138 PHE139 GLN140 LEU141 THR142 GLN143 GLY144 ASP145 GLN146 LEU147 SER148 THR149 HIS150 THR151 ASP152 GLY153 ILE154 PRO155 HIS156 LEU157 VAL158 LEU159 SER160 PRO161 SER162 THR163 VAL164 PHE165 PHE166 GLY167 ALA168 PHE169 ALA170 LEU171
Unit 2 LYS28 PRO29 ALA30 ALA31 HIS32 LEU33 ILE34 GLY35 ASP36 PRO37 SER38 LYS39 GLN40 ASN41 SER42 LEU43 LEU44 TRP45 ARG46 ALA47 ASN48 THR49 ASP50 ARG51 ALA52 PHE53 LEU54 GLN55 ASP56 GLY57 PHE58 SER59 LEU60 SER61 ASN62 ASN63 SER64 LEU65 LEU66 VAL67 PRO68 THR69 SER70 GLY71 ILE72 TYR73 PHE74 VAL75 TYR76 SER77 GLN78 VAL79 VAL80 PHE81 SER82 GLY83 LYS84 SER92 SER93 PRO94 LEU95 TYR96 LEU97 ALA98 HIS99 GLU100 VAL101 GLN102 LEU103 PHE104 SER105 SER106 GLN107 TYR108 PRO109 PHE110 HIS111 VAL112 PRO113 LEU114 LEU115 SER116 SER117 GLN118 LYS119 MET120 VAL121 TYR122 PRO123 GLY124 LEU125 GLN126 GLU127 PRO128 TRP129 LEU130 HIS131 SER132 MET133 TYR134 HIS135 GLY136 ALA137 ALA138 PHE139 GLN140 LEU141 THR142 GLN143 GLY144 ASP145 GLN146 LEU147 SER148 THR149 HIS150 THR151 ASP152 GLY153 ILE154 PRO155 HIS156 LEU157 VAL158 LEU159 SER160 PRO161 SER162 THR163 VAL164 PHE165 PHE166 GLY167 ALA168 PHE169 ALA170 LEU171
Unit 3 LYS28 PRO29 ALA30 ALA31 HIS32 LEU33 ILE34 GLY35 ASP36 PRO37 SER38 LYS39 GLN40 ASN41 SER42 LEU43 LEU44 TRP45 ARG46 ALA47 ASN48 THR49 ASP50 ARG51 ALA52 PHE53 LEU54 GLN55 ASP56 GLY57 PHE58 SER59 LEU60 SER61 ASN62 ASN63 SER64 LEU65 LEU66 VAL67 PRO68 THR69 SER70 GLY71 ILE72 TYR73 PHE74 VAL75 TYR76 SER77 GLN78 VAL79 VAL80 PHE81 SER82 GLY83 LYS84 ALA85 SER92 SER93 PRO94 LEU95 TYR96 LEU97 ALA98 HIS99 GLU100 VAL101 GLN102 LEU103 PHE104 HIS111 VAL112 PRO113 LEU114 LEU115 SER116 SER117 GLN118 LYS119 MET120 VAL121 TYR122 PRO123 GLY124 LEU125 GLN126 GLU127 PRO128 TRP129 LEU130 HIS131 SER132 MET133 TYR134 HIS135 GLY136 ALA137 ALA138 PHE139 GLN140 LEU141 THR142 GLN143 GLY144 ASP145 GLN146 LEU147 SER148 THR149 HIS150 THR151 ASP152 GLY153 ILE154 PRO155 HIS156 LEU157 VAL158 LEU159 SER160 PRO161 SER162 THR163 VAL164 PHE165 PHE166 GLY167 ALA168 PHE169 ALA170 LEU171
Unit 4 ASP1 ILE2 GLN3 MET4 THR5 GLN6 SER7 PRO8 SER9 SER10 LEU11 SER12 ALA13 SER14 VAL15 GLY16 ASP17 ARG18 VAL19 THR20 ILE21 THR22 CYS23 ARG24 ALA25 SER26 GLN27 ALA28 VAL29 SER30 SER31 ALA32 VAL33 ALA34 TRP35 TYR36 GLN37 GLN38 LYS39 PRO40 GLY41 LYS42 ALA43 PRO44 LYS45 LEU46 LEU47 ILE48 TYR49 SER50 ALA51 SER52 HIS53 ARG54 TYR55 THR56 GLY57 VAL58 PRO59 SER60 ARG61 PHE62 SER63 GLY64 SER65 GLY66 SER67 GLY68 THR69 ASP70 PHE71 THR72 LEU73 THR74 ILE75 SER76 SER77 LEU78 GLN79 PRO80 GLU81 ASP82 PHE83 ALA84 THR85 TYR86 TYR87 CYS88 GLN89 GLU90 SER91 TYR92 SER93 THR94 PRO95 TRP96 THR97 PHE98 GLY99 GLN100 GLY101 THR102 LYS103 VAL104 GLU105 ILE106 LYS107 ARG108 THR109 VAL110 ALA111 ALA112 PRO113 SER114 VAL115 PHE116 ILE117 PHE118 PRO119 PRO120 SER121 ASP122 GLU123 GLN124 LEU125 LYS126 SER127 GLY128 THR129 ALA130 SER131 VAL132 VAL133 CYS134 LEU135 LEU136 ASN137 ASN138 PHE139 TYR140 PRO141 ARG142 GLU143 ALA144 LYS145 VAL146 GLN147 TRP148 LYS149 VAL150 ASP151 ASN152 ALA153 LEU154 GLN155 SER156 GLY157 ASN158 SER159 GLN160 GLU161 SER162 VAL163 THR164 GLU165 GLN166 ASP167 SER168 LYS169 ASP170 SER171 THR172 TYR173 SER174 LEU175 SER176 SER177 THR178 LEU179 THR180 LEU181 SER182 LYS183 ALA184 ASP185 TYR186 GLU187 LYS188 HIS189 LYS190 VAL191 TYR192 ALA193 CYS194 GLU195 VAL196 THR197 HIS198 GLN199 GLY200 LEU201 SER202 SER203 PRO204 VAL205 THR206 LYS207 SER208 PHE209 ASN210 ARG211
Unit 5 GLU1 VAL2 GLN3 LEU4 VAL5 GLU6 SER7 GLY8 GLY9 GLY10 LEU11 VAL12 GLN13 PRO14 GLY15 GLY16 SER17 LEU18 ARG19 LEU20 SER21 CYS22 ALA23 ALA24 SER25 GLY26 TYR27 THR28 PHE29 THR30 SER31 TYR32 VAL33 ILE34 HIS35 TRP36 VAL37 ARG38 GLN39 ALA40 PRO41 GLY42 LYS43 GLY44 LEU45 GLU46 TRP47 VAL48 GLY49 TYR50 ASN51 ASN52 PRO52A TYR53 ASN54 ALA55 GLY56 THR57 ASN58 TYR59 ASN60 GLU61 LYS62 PHE63 LYS64 GLY65 ARG66 PHE67 THR68 ILE69 SER70 SER71 ASP72 LYS73 SER74 LYS75 ASN76 THR77 ALA78 TYR79 LEU80 GLN81 MET82 ASN82A SER82B LEU82C ARG83 ALA84 GLU85 ASP86 THR87 ALA88 VAL89 TYR90 TYR91 CYS92 SER93 ARG94 PRO95 THR96 MET97 LEU98 PRO99 TRP100 PHE100K ALA101 TYR102 TRP103 GLY104 GLN105 GLY106 THR107 LEU108 VAL109 THR110 VAL111 SER112 SER113 ALA114 SER115 THR116 LYS117 GLY118 PRO119 SER120 VAL121 PHE122 PRO123 LEU124 ALA125 PRO126 SER127 GLY134 THR135 ALA136 ALA137 LEU138 GLY139 CYS140 LEU141 VAL142 LYS143 ASP144 TYR145 PHE146 PRO147 GLU148 PRO149 VAL150 THR151 VAL152 SER153 TRP154 ASN155 SER156 GLY157 ALA158 LEU159 THR160 SER161 GLY162 VAL163 HIS164 THR165 PHE166 PRO167 ALA168 VAL169 LEU170 GLN171 SER172 SER173 GLY174 LEU175 TYR176 SER177 LEU178 SER179 SER180 VAL181 VAL182 THR183 VAL184 PRO185 SER186 SER187 SER188 LEU189 GLY190 THR191 GLN192 THR193 TYR194 ILE195 CYS196 ASN197 VAL198 ASN199 HIS200 LYS201 PRO202 SER203 ASN204 THR205 LYS206 VAL207 ASP208 LYS209 LYS210 VAL211 GLU212 PRO213 LYS214
Unit 6 ASP1 ILE2 GLN3 MET4 THR5 GLN6 SER7 PRO8 SER9 SER10 LEU11 SER12 ALA13 SER14 VAL15 GLY16 ASP17 ARG18 VAL19 THR20 ILE21 THR22 CYS23 ARG24 ALA25 SER26 GLN27 ALA28 VAL29 SER30 SER31 ALA32 VAL33 ALA34 TRP35 TYR36 GLN37 GLN38 LYS39 PRO40 GLY41 LYS42 ALA43 PRO44 LYS45 LEU46 LEU47 ILE48 TYR49 SER50 ALA51 SER52 HIS53 ARG54 TYR55 THR56 GLY57 VAL58 PRO59 SER60 ARG61 PHE62 SER63 GLY64 SER65 GLY66 SER67 GLY68 THR69 ASP70 PHE71 THR72 LEU73 THR74 ILE75 SER76 SER77 LEU78 GLN79 PRO80 GLU81 ASP82 PHE83 ALA84 THR85 TYR86 TYR87 CYS88 GLN89 GLU90 SER91 TYR92 SER93 THR94 PRO95 TRP96 THR97 PHE98 GLY99 GLN100 GLY101 THR102 LYS103 VAL104 GLU105 ILE106 LYS107 ARG108 THR109 VAL110 ALA111 ALA112 PRO113 SER114 VAL115 PHE116 ILE117 PHE118 PRO119 PRO120 SER121 ASP122 GLU123 GLN124 LEU125 LYS126 SER127 GLY128 THR129 ALA130 SER131 VAL132 VAL133 CYS134 LEU135 LEU136 ASN137 ASN138 PHE139 TYR140 PRO141 ARG142 GLU143 ALA144 LYS145 VAL146 GLN147 TRP148 LYS149 VAL150 ASP151 ASN152 ALA153 LEU154 GLN155 SER156 GLY157 ASN158 SER159 GLN160 GLU161 SER162 VAL163 THR164 GLU165 GLN166 ASP167 SER168 LYS169 ASP170 SER171 THR172 TYR173 SER174 LEU175 SER176 SER177 THR178 LEU179 THR180 LEU181 SER182 LYS183 ALA184 ASP185 TYR186 GLU187 LYS188 HIS189 LYS190 VAL191 TYR192 ALA193 CYS194 GLU195 VAL196 THR197 HIS198 GLN199 GLY200 LEU201 SER202 SER203 PRO204 VAL205 THR206 LYS207 SER208 PHE209 ASN210 ARG211
Unit 7 GLU1 VAL2 GLN3 LEU4 VAL5 GLU6 SER7 GLY8 GLY9 GLY10 LEU11 VAL12 GLN13 PRO14 GLY15 GLY16 SER17 LEU18 ARG19 LEU20 SER21 CYS22 ALA23 ALA24 SER25 GLY26 TYR27 THR28 PHE29 THR30 SER31 TYR32 VAL33 ILE34 HIS35 TRP36 VAL37 ARG38 GLN39 ALA40 PRO41 GLY42 LYS43 GLY44 LEU45 GLU46 TRP47 VAL48 GLY49 TYR50 ASN51 ASN52 PRO52A TYR53 ASN54 ALA55 GLY56 THR57 ASN58 TYR59 ASN60 GLU61 LYS62 PHE63 LYS64 GLY65 ARG66 PHE67 THR68 ILE69 SER70 SER71 ASP72 LYS73 SER74 LYS75 ASN76 THR77 ALA78 TYR79 LEU80 GLN81 MET82 ASN82A SER82B LEU82C ARG83 ALA84 GLU85 ASP86 THR87 ALA88 VAL89 TYR90 TYR91 CYS92 SER93 ARG94 PRO95 THR96 MET97 LEU98 PRO99 TRP100 PHE100K ALA101 TYR102 TRP103 GLY104 GLN105 GLY106 THR107 LEU108 VAL109 THR110 VAL111 SER112 SER113 ALA114 SER115 THR116 LYS117 GLY118 PRO119 SER120 VAL121 PHE122 PRO123 LEU124 ALA125 PRO126 SER127 GLY134 THR135 ALA136 ALA137 LEU138 GLY139 CYS140 LEU141 VAL142 LYS143 ASP144 TYR145 PHE146 PRO147 GLU148 PRO149 VAL150 THR151 VAL152 SER153 TRP154 ASN155 SER156 GLY157 ALA158 LEU159 THR160 SER161 GLY162 VAL163 HIS164 THR165 PHE166 PRO167 ALA168 VAL169 LEU170 GLN171 SER172 SER173 GLY174 LEU175 TYR176 SER177 LEU178 SER179 SER180 VAL181 VAL182 THR183 VAL184 PRO185 SER186 SER187 SER188 LEU189 GLY190 THR191 GLN192 THR193 TYR194 ILE195 CYS196 ASN197 VAL198 ASN199 HIS200 LYS201 PRO202 SER203 ASN204 THR205 LYS206 VAL207 ASP208 LYS209 LYS210 VAL211 GLU212 PRO213 LYS214
Unit 8 ASP1 ILE2 GLN3 MET4 THR5 GLN6 SER7 PRO8 SER9 SER10 LEU11 SER12 ALA13 SER14 VAL15 GLY16 ASP17 ARG18 VAL19 THR20 ILE21 THR22 CYS23 ARG24 ALA25 SER26 GLN27 ALA28 VAL29 SER30 SER31 ALA32 VAL33 ALA34 TRP35 TYR36 GLN37 GLN38 LYS39 PRO40 GLY41 LYS42 ALA43 PRO44 LYS45 LEU46 LEU47 ILE48 TYR49 SER50 ALA51 SER52 HIS53 ARG54 TYR55 THR56 GLY57 VAL58 PRO59 SER60 ARG61 PHE62 SER63 GLY64 SER65 GLY66 SER67 GLY68 THR69 ASP70 PHE71 THR72 LEU73 THR74 ILE75 SER76 SER77 LEU78 GLN79 PRO80 GLU81 ASP82 PHE83 ALA84 THR85 TYR86 TYR87 CYS88 GLN89 GLU90 SER91 TYR92 SER93 THR94 PRO95 TRP96 THR97 PHE98 GLY99 GLN100 GLY101 THR102 LYS103 VAL104 GLU105 ILE106 LYS107 ARG108 THR109 VAL110 ALA111 ALA112 PRO113 SER114 VAL115 PHE116 ILE117 PHE118 PRO119 PRO120 SER121 ASP122 GLU123 GLN124 LEU125 LYS126 SER127 GLY128 THR129 ALA130 SER131 VAL132 VAL133 CYS134 LEU135 LEU136 ASN137 ASN138 PHE139 TYR140 PRO141 ARG142 GLU143 ALA144 LYS145 VAL146 GLN147 TRP148 LYS149 VAL150 ASP151 ASN152 ALA153 LEU154 GLN155 SER156 GLY157 ASN158 SER159 GLN160 GLU161 SER162 VAL163 THR164 GLU165 GLN166 ASP167 SER168 LYS169 ASP170 SER171 THR172 TYR173 SER174 LEU175 SER176 SER177 THR178 LEU179 THR180 LEU181 SER182 LYS183 ALA184 ASP185 TYR186 GLU187 LYS188 HIS189 LYS190 VAL191 TYR192 ALA193 CYS194 GLU195 VAL196 THR197 HIS198 GLN199 GLY200 LEU201 SER202 SER203 PRO204 VAL205 THR206 LYS207 SER208 PHE209 ASN210 ARG211
Unit 9 GLU1 VAL2 GLN3 LEU4 VAL5 GLU6 SER7 GLY8 GLY9 GLY10 LEU11 VAL12 GLN13 PRO14 GLY15 GLY16 SER17 LEU18 ARG19 LEU20 SER21 CYS22 ALA23 ALA24 SER25 GLY26 TYR27 THR28 PHE29 THR30 SER31 TYR32 VAL33 ILE34 HIS35 TRP36 VAL37 ARG38 GLN39 ALA40 PRO41 GLY42 LYS43 GLY44 LEU45 GLU46 TRP47 VAL48 GLY49 TYR50 ASN51 ASN52 PRO52A TYR53 ASN54 ALA55 GLY56 THR57 ASN58 TYR59 ASN60 GLU61 LYS62 PHE63 LYS64 GLY65 ARG66 PHE67 THR68 ILE69 SER70 SER71 ASP72 LYS73 SER74 LYS75 ASN76 THR77 ALA78 TYR79 LEU80 GLN81 MET82 ASN82A SER82B LEU82C ARG83 ALA84 GLU85 ASP86 THR87 ALA88 VAL89 TYR90 TYR91 CYS92 SER93 ARG94 PRO95 THR96 MET97 LEU98 PRO99 TRP100 PHE100K ALA101 TYR102 TRP103 GLY104 GLN105 GLY106 THR107 LEU108 VAL109 THR110 VAL111 SER112 SER113 ALA114 SER115 THR116 LYS117 GLY118 PRO119 SER120 VAL121 PHE122 PRO123 LEU124 ALA125 PRO126 SER127 GLY134 THR135 ALA136 ALA137 LEU138 GLY139 CYS140 LEU141 VAL142 LYS143 ASP144 TYR145 PHE146 PRO147 GLU148 PRO149 VAL150 THR151 VAL152 SER153 TRP154 ASN155 SER156 GLY157 ALA158 LEU159 THR160 SER161 GLY162 VAL163 HIS164 THR165 PHE166 PRO167 ALA168 VAL169 LEU170 GLN171 SER172 SER173 GLY174 LEU175 TYR176 SER177 LEU178 SER179 SER180 VAL181 VAL182 THR183 VAL184 PRO185 SER186 SER187 SER188 LEU189 GLY190 THR191 GLN192 THR193 TYR194 ILE195 CYS196 ASN197 VAL198 ASN199 HIS200 LYS201 PRO202 SER203 ASN204 THR205 LYS206 VAL207 ASP208 LYS209 LYS210 VAL211 GLU212 PRO213 LYS214

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany