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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF SCHIZOSACCHAROMYCES POMBE AMSH-LIKE PRO CATALYTIC DOMAIN BOUND TO UBIQUITIN
Keywords UBIQUITIN, DEUBIQUITINATION, HELIX-BETA-HELIX SANDWICH, ZINC METALLOPROTEASE, LYSINE 63-LINKED POLYUBIQUITIN, CYTOSOL, E HYDROLASE-PROTEIN BINDING COMPLEX
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   4MSQ     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   AMSH-LIKE PROTEASE SST2  A 185 1449 0
2  Protein   UBIQUITIN  B 77 608 0
3  Protein   AMSH-LIKE PROTEASE SST2  C 186 1463 0
4  Protein   UBIQUITIN  D 75 558 0
5  Ligand   AMSH-LIKE PROTEASE SST2  A 7 0 22
6  Ligand   UBIQUITIN  B 2 0 8
7  Ligand   AMSH-LIKE PROTEASE SST2  C 7 0 23
8  Ligand   UBIQUITIN  D 2 0 8
9 Water     305 0 305
total       846 4078 366
Proteins
Unit 1 LYS249 ILE250 HIS251 ALA252 TYR253 THR254 GLU255 GLY256 GLY257 LYS258 PRO259 LEU260 ARG261 THR262 ILE263 TYR264 LEU265 PRO266 LYS267 LEU268 LEU269 LYS270 LYS271 VAL272 PHE273 LEU274 ASP275 VAL276 VAL277 LYS278 PRO279 ASN280 THR281 LYS282 LYS283 ASN284 LEU285 GLU286 THR287 CYS288 GLY289 ILE290 LEU291 CYS292 GLY293 LYS294 LEU295 ARG296 GLN297 ASN298 ALA299 PHE300 PHE301 ILE302 THR303 HIS304 LEU305 VAL306 ILE307 PRO308 LEU309 GLN310 GLU311 ALA312 THR313 SER314 ASP315 THR316 CYS317 GLY318 THR319 THR320 ASP321 GLU322 ALA323 SER324 LEU325 PHE326 GLU327 PHE328 GLN329 ASP330 LYS331 HIS332 ASN333 LEU334 LEU335 THR336 LEU337 GLY338 TRP339 ILE340 HIS341 THR342 HIS343 PRO344 THR345 GLN346 THR347 CYS348 PHE349 MET350 SER351 SER352 VAL353 ASP354 LEU355 HIS356 THR357 HIS358 CYS359 SER360 TYR361 GLN362 LEU363 MET364 LEU365 PRO366 GLU367 ALA368 ILE369 ALA370 ILE371 VAL372 MET373 ALA374 PRO375 SER376 LYS377 ASN378 THR379 SER380 GLY381 ILE382 PHE383 ARG384 LEU385 LEU386 ASP387 PRO388 GLU389 GLY390 LEU391 GLN392 THR393 ILE394 VAL395 LYS396 CYS397 ARG398 LYS399 PRO400 GLY401 LEU402 PHE403 HIS404 PRO405 HIS406 GLU407 GLY408 LYS409 VAL410 TYR411 THR412 MET413 VAL414 ALA415 GLN416 PRO417 GLY418 HIS419 VAL420 ARG421 GLU422 ILE423 ASN424 SER425 LYS426 LEU427 GLN428 VAL429 VAL430 ASP431 LEU432 ARG433
Unit 2 SER0 MET1 GLN2 ILE3 PHE4 VAL5 LYS6 THR7 LEU8 THR9 GLY10 LYS11 THR12 ILE13 THR14 LEU15 GLU16 VAL17 GLU18 PRO19 SER20 ASP21 THR22 ILE23 GLU24 ASN25 VAL26 LYS27 ALA28 LYS29 ILE30 GLN31 ASP32 LYS33 GLU34 GLY35 ILE36 PRO37 PRO38 ASP39 GLN40 GLN41 ARG42 LEU43 ILE44 PHE45 ALA46 GLY47 LYS48 GLN49 LEU50 GLU51 ASP52 GLY53 ARG54 THR55 LEU56 SER57 ASP58 TYR59 ASN60 ILE61 GLN62 LYS63 GLU64 SER65 THR66 LEU67 HIS68 LEU69 VAL70 LEU71 ARG72 LEU73 ARG74 GLY75 GLY76
Unit 3 PHE248 LYS249 ILE250 HIS251 ALA252 TYR253 THR254 GLU255 GLY256 GLY257 LYS258 PRO259 LEU260 ARG261 THR262 ILE263 TYR264 LEU265 PRO266 LYS267 LEU268 LEU269 LYS270 LYS271 VAL272 PHE273 LEU274 ASP275 VAL276 VAL277 LYS278 PRO279 ASN280 THR281 LYS282 LYS283 ASN284 LEU285 GLU286 THR287 CYS288 GLY289 ILE290 LEU291 CYS292 GLY293 LYS294 LEU295 ARG296 GLN297 ASN298 ALA299 PHE300 PHE301 ILE302 THR303 HIS304 LEU305 VAL306 ILE307 PRO308 LEU309 GLN310 GLU311 ALA312 THR313 SER314 ASP315 THR316 CYS317 GLY318 THR319 THR320 ASP321 GLU322 ALA323 SER324 LEU325 PHE326 GLU327 PHE328 GLN329 ASP330 LYS331 HIS332 ASN333 LEU334 LEU335 THR336 LEU337 GLY338 TRP339 ILE340 HIS341 THR342 HIS343 PRO344 THR345 GLN346 THR347 CYS348 PHE349 MET350 SER351 SER352 VAL353 ASP354 LEU355 HIS356 THR357 HIS358 CYS359 SER360 TYR361 GLN362 LEU363 MET364 LEU365 PRO366 GLU367 ALA368 ILE369 ALA370 ILE371 VAL372 MET373 ALA374 PRO375 SER376 LYS377 ASN378 THR379 SER380 GLY381 ILE382 PHE383 ARG384 LEU385 LEU386 ASP387 PRO388 GLU389 GLY390 LEU391 GLN392 THR393 ILE394 VAL395 LYS396 CYS397 ARG398 LYS399 PRO400 GLY401 LEU402 PHE403 HIS404 PRO405 HIS406 GLU407 GLY408 LYS409 VAL410 TYR411 THR412 MET413 VAL414 ALA415 GLN416 PRO417 GLY418 HIS419 VAL420 ARG421 GLU422 ILE423 ASN424 SER425 LYS426 LEU427 GLN428 VAL429 VAL430 ASP431 LEU432 ARG433
Unit 4 GLN2 ILE3 PHE4 VAL5 LYS6 THR7 LEU8 THR9 GLY10 LYS11 THR12 ILE13 THR14 LEU15 GLU16 VAL17 GLU18 PRO19 SER20 ASP21 THR22 ILE23 GLU24 ASN25 VAL26 LYS27 ALA28 LYS29 ILE30 GLN31 ASP32 LYS33 GLU34 GLY35 ILE36 PRO37 PRO38 ASP39 GLN40 GLN41 ARG42 LEU43 ILE44 PHE45 ALA46 GLY47 LYS48 GLN49 LEU50 GLU51 ASP52 GLY53 ARG54 THR55 LEU56 SER57 ASP58 TYR59 ASN60 ILE61 GLN62 LYS63 GLU64 SER65 THR66 LEU67 HIS68 LEU69 VAL70 LEU71 ARG72 LEU73 ARG74 GLY75 GLY76
Ligands
Unit 5 ZN501 ZN502 EDO503 EDO504 EDO505 EDO506 EDO507
Unit 6 EDO101 EDO102
Unit 7 ZN501 ZN502 PO4503 EDO504 EDO505 EDO506 EDO507
Unit 8 EDO101 EDO102
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany