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Sequence, Chains, Asymmetric and Biological Units

Title		`RNA 10MER DUPLEX WITH TWO 2'-5'-LINKAGES`
Keywords		`2'-5'-LINKAGE, RNA`
Experiment		`X-ray diffraction`
Number of Models		`1`


Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit

PDB	4MSB	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB
Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	RNA		A	10	212	0
2	RNA		B	10	212	0
3	RNA		C	10	212	0
4	RNA		D	10	212	0
5	RNA		E	10	212	0
6	RNA		F	10	212	0
7	Ligand	`RNA 10MER DUPLEX WITH TWO 2'-5'-LINKAGES`	A	1	0	1
8	Ligand	`RNA 10MER DUPLEX WITH TWO 2'-5'-LINKAGES`	B	1	0	1
9	Ligand	`RNA 10MER DUPLEX WITH TWO 2'-5'-LINKAGES`	C	1	0	1
10	Ligand	`RNA 10MER DUPLEX WITH TWO 2'-5'-LINKAGES`	D	1	0	1
11	Ligand	`RNA 10MER DUPLEX WITH TWO 2'-5'-LINKAGES`	E	2	0	2
12	Ligand	`RNA 10MER DUPLEX WITH TWO 2'-5'-LINKAGES`	F	1	0	1
13	Water			187	0	187
total				254	1272	194

Nucleic acids

Unit 1	C₁ C₂ G₃ G₄ C₅ G₆ C₇ C₈ G₉ G₁₀
Unit 2	C₁ C₂ G₃ G₄ C₅ G₆ C₇ C₈ G₉ G₁₀
Unit 3	C₁ C₂ G₃ G₄ C₅ G₆ C₇ C₈ G₉ G₁₀
Unit 4	C₁ C₂ G₃ G₄ C₅ G₆ C₇ C₈ G₉ G₁₀
Unit 5	C₁ C₂ G₃ G₄ C₅ G₆ C₇ C₈ G₉ G₁₀
Unit 6	C₁ C₂ G₃ G₄ C₅ G₆ C₇ C₈ G₉ G₁₀

Ligands

Unit 7	SR₁₀₁
Unit 8	SR₁₀₁
Unit 9	SR₁₀₁
Unit 10	SR₁₀₁
Unit 11	SR₁₀₁ SR₁₀₂
Unit 12	SR₁₀₁

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.

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Perl script:	PDBscan.pl (15 Sep 2016)
Author:	Peter Slickers (`slickers@leibniz-fli.de`), IMB Jena, Germany