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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF THE MONOMERIC, CLEAVED FORM OF THE PORE TOXIN MONALYSIN
Keywords PORE-FORMING TOXIN, TOXIN
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4MKO     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   MONALYSIN  A 236 1872 0
2  Protein   MONALYSIN  B 235 1866 0
3  Protein   MONALYSIN  C 235 1866 0
4  Protein   MONALYSIN  D 236 1872 0
5  Ligand   MONALYSIN  A 6 0 12
6  Ligand   MONALYSIN  B 8 0 20
7  Ligand   MONALYSIN  C 9 0 24
8  Ligand   MONALYSIN  D 6 0 12
9 Water     1318 0 1318
total       2289 7476 1386

Proteins
Unit 1 SER36 GLY37 ARG38 PHE39 ASP40 GLN41 TYR42 PRO43 THR44 LYS45 LYS46 GLY47 ASP48 PHE49 ALA50 ILE51 ASP52 GLY53 TYR54 LEU55 LEU56 ASP57 TYR58 SER59 SER60 PRO61 LYS62 GLN63 GLY64 CYS65 TRP66 VAL67 ASP68 GLY69 ILE70 THR71 VAL72 TYR73 GLY74 ASP75 ILE76 TYR77 ILE78 GLY79 LYS80 GLN81 ASN82 TRP83 GLY84 THR85 TYR86 THR87 ARG88 PRO89 VAL90 PHE91 ALA92 TYR93 LEU94 GLN95 TYR96 VAL97 GLU98 THR99 ILE100 SER101 ILE102 PRO103 GLN104 ASN105 VAL106 THR107 THR108 THR109 LEU110 SER111 TYR112 GLN113 LEU114 THR115 LYS116 GLY117 HIS118 THR119 ARG120 SER121 PHE122 GLU123 THR124 SER125 VAL126 ASN127 ALA128 LYS129 TYR130 SER131 VAL132 GLY133 ALA134 ASN135 ILE136 ASP137 ILE138 VAL139 ASN140 VAL141 GLY142 SER143 GLU144 ILE145 SER146 THR147 GLY148 PHE149 THR150 ARG151 SER152 GLU153 SER154 TRP155 SER156 THR157 THR158 GLN159 SER160 PHE161 THR162 ASP163 THR164 THR165 GLU166 MET167 LYS168 GLY169 PRO170 GLY171 THR172 PHE173 VAL174 ILE175 TYR176 GLN177 VAL178 VAL179 LEU180 VAL181 TYR182 ALA183 HIS184 ASN185 ALA186 THR187 SER188 ALA189 GLY190 ARG191 GLN192 ASN193 ALA194 ASN195 ALA196 PHE197 ALA198 TYR199 SER200 LYS201 THR202 GLN203 ALA204 VAL205 GLY206 SER207 ARG208 VAL209 ASP210 LEU211 TYR212 TYR213 LEU214 SER215 ALA216 ILE217 THR218 GLN219 ARG220 LYS221 ARG222 VAL223 ILE224 VAL225 PRO226 SER227 SER228 ASN229 ALA230 VAL231 THR232 PRO233 LEU234 ASP235 TRP236 ASP237 THR238 VAL239 GLN240 ARG241 ASN242 VAL243 LEU244 MET245 GLU246 ASN247 TYR248 ASN249 PRO250 GLY251 SER252 ASN253 SER254 GLY255 HIS256 PHE257 SER258 PHE259 ASP260 TRP261 SER262 ALA263 TYR264 ASN265 ASP266 PRO267 HIS268 ARG269 ARG270 TYR271
Unit 2 GLY37 ARG38 PHE39 ASP40 GLN41 TYR42 PRO43 THR44 LYS45 LYS46 GLY47 ASP48 PHE49 ALA50 ILE51 ASP52 GLY53 TYR54 LEU55 LEU56 ASP57 TYR58 SER59 SER60 PRO61 LYS62 GLN63 GLY64 CYS65 TRP66 VAL67 ASP68 GLY69 ILE70 THR71 VAL72 TYR73 GLY74 ASP75 ILE76 TYR77 ILE78 GLY79 LYS80 GLN81 ASN82 TRP83 GLY84 THR85 TYR86 THR87 ARG88 PRO89 VAL90 PHE91 ALA92 TYR93 LEU94 GLN95 TYR96 VAL97 GLU98 THR99 ILE100 SER101 ILE102 PRO103 GLN104 ASN105 VAL106 THR107 THR108 THR109 LEU110 SER111 TYR112 GLN113 LEU114 THR115 LYS116 GLY117 HIS118 THR119 ARG120 SER121 PHE122 GLU123 THR124 SER125 VAL126 ASN127 ALA128 LYS129 TYR130 SER131 VAL132 GLY133 ALA134 ASN135 ILE136 ASP137 ILE138 VAL139 ASN140 VAL141 GLY142 SER143 GLU144 ILE145 SER146 THR147 GLY148 PHE149 THR150 ARG151 SER152 GLU153 SER154 TRP155 SER156 THR157 THR158 GLN159 SER160 PHE161 THR162 ASP163 THR164 THR165 GLU166 MET167 LYS168 GLY169 PRO170 GLY171 THR172 PHE173 VAL174 ILE175 TYR176 GLN177 VAL178 VAL179 LEU180 VAL181 TYR182 ALA183 HIS184 ASN185 ALA186 THR187 SER188 ALA189 GLY190 ARG191 GLN192 ASN193 ALA194 ASN195 ALA196 PHE197 ALA198 TYR199 SER200 LYS201 THR202 GLN203 ALA204 VAL205 GLY206 SER207 ARG208 VAL209 ASP210 LEU211 TYR212 TYR213 LEU214 SER215 ALA216 ILE217 THR218 GLN219 ARG220 LYS221 ARG222 VAL223 ILE224 VAL225 PRO226 SER227 SER228 ASN229 ALA230 VAL231 THR232 PRO233 LEU234 ASP235 TRP236 ASP237 THR238 VAL239 GLN240 ARG241 ASN242 VAL243 LEU244 MET245 GLU246 ASN247 TYR248 ASN249 PRO250 GLY251 SER252 ASN253 SER254 GLY255 HIS256 PHE257 SER258 PHE259 ASP260 TRP261 SER262 ALA263 TYR264 ASN265 ASP266 PRO267 HIS268 ARG269 ARG270 TYR271
Unit 3 GLY37 ARG38 PHE39 ASP40 GLN41 TYR42 PRO43 THR44 LYS45 LYS46 GLY47 ASP48 PHE49 ALA50 ILE51 ASP52 GLY53 TYR54 LEU55 LEU56 ASP57 TYR58 SER59 SER60 PRO61 LYS62 GLN63 GLY64 CYS65 TRP66 VAL67 ASP68 GLY69 ILE70 THR71 VAL72 TYR73 GLY74 ASP75 ILE76 TYR77 ILE78 GLY79 LYS80 GLN81 ASN82 TRP83 GLY84 THR85 TYR86 THR87 ARG88 PRO89 VAL90 PHE91 ALA92 TYR93 LEU94 GLN95 TYR96 VAL97 GLU98 THR99 ILE100 SER101 ILE102 PRO103 GLN104 ASN105 VAL106 THR107 THR108 THR109 LEU110 SER111 TYR112 GLN113 LEU114 THR115 LYS116 GLY117 HIS118 THR119 ARG120 SER121 PHE122 GLU123 THR124 SER125 VAL126 ASN127 ALA128 LYS129 TYR130 SER131 VAL132 GLY133 ALA134 ASN135 ILE136 ASP137 ILE138 VAL139 ASN140 VAL141 GLY142 SER143 GLU144 ILE145 SER146 THR147 GLY148 PHE149 THR150 ARG151 SER152 GLU153 SER154 TRP155 SER156 THR157 THR158 GLN159 SER160 PHE161 THR162 ASP163 THR164 THR165 GLU166 MET167 LYS168 GLY169 PRO170 GLY171 THR172 PHE173 VAL174 ILE175 TYR176 GLN177 VAL178 VAL179 LEU180 VAL181 TYR182 ALA183 HIS184 ASN185 ALA186 THR187 SER188 ALA189 GLY190 ARG191 GLN192 ASN193 ALA194 ASN195 ALA196 PHE197 ALA198 TYR199 SER200 LYS201 THR202 GLN203 ALA204 VAL205 GLY206 SER207 ARG208 VAL209 ASP210 LEU211 TYR212 TYR213 LEU214 SER215 ALA216 ILE217 THR218 GLN219 ARG220 LYS221 ARG222 VAL223 ILE224 VAL225 PRO226 SER227 SER228 ASN229 ALA230 VAL231 THR232 PRO233 LEU234 ASP235 TRP236 ASP237 THR238 VAL239 GLN240 ARG241 ASN242 VAL243 LEU244 MET245 GLU246 ASN247 TYR248 ASN249 PRO250 GLY251 SER252 ASN253 SER254 GLY255 HIS256 PHE257 SER258 PHE259 ASP260 TRP261 SER262 ALA263 TYR264 ASN265 ASP266 PRO267 HIS268 ARG269 ARG270 TYR271
Unit 4 SER36 GLY37 ARG38 PHE39 ASP40 GLN41 TYR42 PRO43 THR44 LYS45 LYS46 GLY47 ASP48 PHE49 ALA50 ILE51 ASP52 GLY53 TYR54 LEU55 LEU56 ASP57 TYR58 SER59 SER60 PRO61 LYS62 GLN63 GLY64 CYS65 TRP66 VAL67 ASP68 GLY69 ILE70 THR71 VAL72 TYR73 GLY74 ASP75 ILE76 TYR77 ILE78 GLY79 LYS80 GLN81 ASN82 TRP83 GLY84 THR85 TYR86 THR87 ARG88 PRO89 VAL90 PHE91 ALA92 TYR93 LEU94 GLN95 TYR96 VAL97 GLU98 THR99 ILE100 SER101 ILE102 PRO103 GLN104 ASN105 VAL106 THR107 THR108 THR109 LEU110 SER111 TYR112 GLN113 LEU114 THR115 LYS116 GLY117 HIS118 THR119 ARG120 SER121 PHE122 GLU123 THR124 SER125 VAL126 ASN127 ALA128 LYS129 TYR130 SER131 VAL132 GLY133 ALA134 ASN135 ILE136 ASP137 ILE138 VAL139 ASN140 VAL141 GLY142 SER143 GLU144 ILE145 SER146 THR147 GLY148 PHE149 THR150 ARG151 SER152 GLU153 SER154 TRP155 SER156 THR157 THR158 GLN159 SER160 PHE161 THR162 ASP163 THR164 THR165 GLU166 MET167 LYS168 GLY169 PRO170 GLY171 THR172 PHE173 VAL174 ILE175 TYR176 GLN177 VAL178 VAL179 LEU180 VAL181 TYR182 ALA183 HIS184 ASN185 ALA186 THR187 SER188 ALA189 GLY190 ARG191 GLN192 ASN193 ALA194 ASN195 ALA196 PHE197 ALA198 TYR199 SER200 LYS201 THR202 GLN203 ALA204 VAL205 GLY206 SER207 ARG208 VAL209 ASP210 LEU211 TYR212 TYR213 LEU214 SER215 ALA216 ILE217 THR218 GLN219 ARG220 LYS221 ARG222 VAL223 ILE224 VAL225 PRO226 SER227 SER228 ASN229 ALA230 VAL231 THR232 PRO233 LEU234 ASP235 TRP236 ASP237 THR238 VAL239 GLN240 ARG241 ASN242 VAL243 LEU244 MET245 GLU246 ASN247 TYR248 ASN249 PRO250 GLY251 SER252 ASN253 SER254 GLY255 HIS256 PHE257 SER258 PHE259 ASP260 TRP261 SER262 ALA263 TYR264 ASN265 ASP266 PRO267 HIS268 ARG269 ARG270 TYR271

Ligands
Unit 5 HG1001 HG1002 ZN1003 ZN1004 ACT1005 ACT1006
Unit 6 HG1001 HG1002 ZN1003 ZN1004 ACT1005 ACT1006 ACT1007 ACT1008
Unit 7 HG1001 HG1002 ZN1003 ZN1004 ACT1005 ACT1006 ACT1007 ACT1008 ACT1009
Unit 8 HG1001 HG1002 ZN1003 ZN1004 ACT1005 ACT1006

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany