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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF MYO-INOSITOL DEHYDROGENASE FROM LACTOBA CASEI WITH BOUND COFACTOR NAD
Keywords NAD, SUGAR ALCOHOL DEHYDROGENASES, ROSSMANN FOLD, DEHYDROGEN BINDING, MYO-INOSITOL BINDING, DEHYDROGENATE, OXIDOREDUCTAS
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4MIN     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein    A 339 2622 0
2  Protein    B 339 2622 0
3  Protein    C 339 2622 0
4  Protein    D 339 2622 0
5  Ligand    A 6 0 71
6  Ligand    B 2 0 50
7  Ligand    C 4 0 60
8  Ligand    D 3 0 55
9 Water     1052 0 1052
total       2423 10488 1288

Proteins
Unit 1 MET1 VAL2 VAL3 LYS4 VAL5 GLY6 VAL7 ILE8 GLY9 THR10 GLY11 ALA12 MET13 GLY14 ARG15 ALA16 HIS17 ILE18 ASP19 ARG20 LEU21 THR22 ASN23 VAL24 LEU25 THR26 GLY27 ALA28 GLU29 VAL30 VAL31 ALA32 VAL33 THR34 ASP35 ILE36 ASP37 HIS38 GLU39 ALA40 ALA41 GLU42 ALA43 ALA44 VAL45 ARG46 ASP47 PHE48 HIS49 LEU50 ASN51 ALA52 LYS53 VAL54 TYR55 PRO56 ASP57 ASP58 THR59 SER60 LEU61 LEU62 GLN63 ASP64 PRO65 ASP66 ILE67 ASP68 ALA69 VAL70 PHE71 VAL72 VAL73 SER74 PHE75 GLY76 GLY77 ALA78 HIS79 GLU80 ALA81 THR82 VAL83 LEU84 LYS85 ALA86 LEU87 ASP88 THR89 ASP90 LYS91 PHE92 ILE93 PHE94 THR95 GLU96 LYS97 PRO98 LEU99 ALA100 THR101 THR102 LEU103 GLU104 GLY105 ALA106 LYS107 ARG108 ILE109 VAL110 ASP111 LYS112 GLU113 LEU114 THR115 LYS116 SER117 LYS118 LYS119 VAL120 ILE121 GLN122 VAL123 GLY124 PHE125 MET126 ARG127 ARG128 TYR129 ASP130 GLN131 GLY132 ILE133 ARG134 ALA135 LEU136 LYS137 GLU138 LYS139 LEU140 ASP141 THR142 GLY143 ILE144 ILE145 GLY146 ALA147 PRO148 LEU149 VAL150 VAL151 ARG152 ALA153 SER154 HIS155 ILE156 ASN157 PRO158 ASN159 VAL160 ALA161 SER162 ASN163 TYR164 SER165 ASN166 GLU167 MET168 ALA169 ILE170 THR171 ASP172 THR173 LEU174 ILE175 HIS176 GLU177 ILE178 ASP179 GLU180 MET181 HIS182 TRP183 LEU184 LEU185 ASP186 ASP187 GLU188 TYR189 THR190 SER191 ILE192 GLN193 ILE194 THR195 TYR196 PRO197 ARG198 GLN199 SER200 ALA201 GLU202 VAL203 ARG204 ASN205 GLU206 GLY207 LEU208 HIS209 ASP210 PRO211 GLN212 LEU213 ALA214 THR215 LEU216 THR217 THR218 LYS219 LYS220 GLY221 THR222 VAL223 ILE224 GLN225 VAL226 LEU227 VAL228 HIS229 VAL230 THR231 ALA232 GLN233 TYR234 GLY235 TYR236 GLU237 VAL238 LYS239 LEU240 GLU241 VAL242 ILE243 GLY244 GLU245 THR246 GLY247 GLU248 LEU249 GLN250 LEU251 PRO252 ASN253 TYR254 GLY255 LEU256 GLY257 PRO258 ILE259 LEU260 ARG261 SER262 ASN263 ALA264 ASN265 GLN266 GLN267 THR268 ALA269 VAL270 GLU271 MET272 SER273 TRP274 ILE275 ASN276 ARG277 PHE278 ILE279 GLN280 ALA281 TYR282 ASN283 THR284 GLU285 VAL286 GLN287 GLU288 PHE289 ILE290 ASP291 GLU292 VAL293 ALA294 LYS295 SER296 GLU297 PRO298 PRO299 VAL300 GLY301 PRO302 SER303 ALA304 TRP305 ASP306 GLY307 TYR308 ILE309 ALA310 ALA311 ILE312 THR313 ALA314 ALA315 ALA316 ALA317 ASN318 ARG319 SER320 GLN321 LYS322 ASP323 GLN324 GLU325 THR326 VAL327 LEU328 ILE329 ASN330 VAL331 ALA332 GLY333 THR334 PRO335 THR336 PHE337 TYR338 GLN339
Unit 2 MET1 VAL2 VAL3 LYS4 VAL5 GLY6 VAL7 ILE8 GLY9 THR10 GLY11 ALA12 MET13 GLY14 ARG15 ALA16 HIS17 ILE18 ASP19 ARG20 LEU21 THR22 ASN23 VAL24 LEU25 THR26 GLY27 ALA28 GLU29 VAL30 VAL31 ALA32 VAL33 THR34 ASP35 ILE36 ASP37 HIS38 GLU39 ALA40 ALA41 GLU42 ALA43 ALA44 VAL45 ARG46 ASP47 PHE48 HIS49 LEU50 ASN51 ALA52 LYS53 VAL54 TYR55 PRO56 ASP57 ASP58 THR59 SER60 LEU61 LEU62 GLN63 ASP64 PRO65 ASP66 ILE67 ASP68 ALA69 VAL70 PHE71 VAL72 VAL73 SER74 PHE75 GLY76 GLY77 ALA78 HIS79 GLU80 ALA81 THR82 VAL83 LEU84 LYS85 ALA86 LEU87 ASP88 THR89 ASP90 LYS91 PHE92 ILE93 PHE94 THR95 GLU96 LYS97 PRO98 LEU99 ALA100 THR101 THR102 LEU103 GLU104 GLY105 ALA106 LYS107 ARG108 ILE109 VAL110 ASP111 LYS112 GLU113 LEU114 THR115 LYS116 SER117 LYS118 LYS119 VAL120 ILE121 GLN122 VAL123 GLY124 PHE125 MET126 ARG127 ARG128 TYR129 ASP130 GLN131 GLY132 ILE133 ARG134 ALA135 LEU136 LYS137 GLU138 LYS139 LEU140 ASP141 THR142 GLY143 ILE144 ILE145 GLY146 ALA147 PRO148 LEU149 VAL150 VAL151 ARG152 ALA153 SER154 HIS155 ILE156 ASN157 PRO158 ASN159 VAL160 ALA161 SER162 ASN163 TYR164 SER165 ASN166 GLU167 MET168 ALA169 ILE170 THR171 ASP172 THR173 LEU174 ILE175 HIS176 GLU177 ILE178 ASP179 GLU180 MET181 HIS182 TRP183 LEU184 LEU185 ASP186 ASP187 GLU188 TYR189 THR190 SER191 ILE192 GLN193 ILE194 THR195 TYR196 PRO197 ARG198 GLN199 SER200 ALA201 GLU202 VAL203 ARG204 ASN205 GLU206 GLY207 LEU208 HIS209 ASP210 PRO211 GLN212 LEU213 ALA214 THR215 LEU216 THR217 THR218 LYS219 LYS220 GLY221 THR222 VAL223 ILE224 GLN225 VAL226 LEU227 VAL228 HIS229 VAL230 THR231 ALA232 GLN233 TYR234 GLY235 TYR236 GLU237 VAL238 LYS239 LEU240 GLU241 VAL242 ILE243 GLY244 GLU245 THR246 GLY247 GLU248 LEU249 GLN250 LEU251 PRO252 ASN253 TYR254 GLY255 LEU256 GLY257 PRO258 ILE259 LEU260 ARG261 SER262 ASN263 ALA264 ASN265 GLN266 GLN267 THR268 ALA269 VAL270 GLU271 MET272 SER273 TRP274 ILE275 ASN276 ARG277 PHE278 ILE279 GLN280 ALA281 TYR282 ASN283 THR284 GLU285 VAL286 GLN287 GLU288 PHE289 ILE290 ASP291 GLU292 VAL293 ALA294 LYS295 SER296 GLU297 PRO298 PRO299 VAL300 GLY301 PRO302 SER303 ALA304 TRP305 ASP306 GLY307 TYR308 ILE309 ALA310 ALA311 ILE312 THR313 ALA314 ALA315 ALA316 ALA317 ASN318 ARG319 SER320 GLN321 LYS322 ASP323 GLN324 GLU325 THR326 VAL327 LEU328 ILE329 ASN330 VAL331 ALA332 GLY333 THR334 PRO335 THR336 PHE337 TYR338 GLN339
Unit 3 MET1 VAL2 VAL3 LYS4 VAL5 GLY6 VAL7 ILE8 GLY9 THR10 GLY11 ALA12 MET13 GLY14 ARG15 ALA16 HIS17 ILE18 ASP19 ARG20 LEU21 THR22 ASN23 VAL24 LEU25 THR26 GLY27 ALA28 GLU29 VAL30 VAL31 ALA32 VAL33 THR34 ASP35 ILE36 ASP37 HIS38 GLU39 ALA40 ALA41 GLU42 ALA43 ALA44 VAL45 ARG46 ASP47 PHE48 HIS49 LEU50 ASN51 ALA52 LYS53 VAL54 TYR55 PRO56 ASP57 ASP58 THR59 SER60 LEU61 LEU62 GLN63 ASP64 PRO65 ASP66 ILE67 ASP68 ALA69 VAL70 PHE71 VAL72 VAL73 SER74 PHE75 GLY76 GLY77 ALA78 HIS79 GLU80 ALA81 THR82 VAL83 LEU84 LYS85 ALA86 LEU87 ASP88 THR89 ASP90 LYS91 PHE92 ILE93 PHE94 THR95 GLU96 LYS97 PRO98 LEU99 ALA100 THR101 THR102 LEU103 GLU104 GLY105 ALA106 LYS107 ARG108 ILE109 VAL110 ASP111 LYS112 GLU113 LEU114 THR115 LYS116 SER117 LYS118 LYS119 VAL120 ILE121 GLN122 VAL123 GLY124 PHE125 MET126 ARG127 ARG128 TYR129 ASP130 GLN131 GLY132 ILE133 ARG134 ALA135 LEU136 LYS137 GLU138 LYS139 LEU140 ASP141 THR142 GLY143 ILE144 ILE145 GLY146 ALA147 PRO148 LEU149 VAL150 VAL151 ARG152 ALA153 SER154 HIS155 ILE156 ASN157 PRO158 ASN159 VAL160 ALA161 SER162 ASN163 TYR164 SER165 ASN166 GLU167 MET168 ALA169 ILE170 THR171 ASP172 THR173 LEU174 ILE175 HIS176 GLU177 ILE178 ASP179 GLU180 MET181 HIS182 TRP183 LEU184 LEU185 ASP186 ASP187 GLU188 TYR189 THR190 SER191 ILE192 GLN193 ILE194 THR195 TYR196 PRO197 ARG198 GLN199 SER200 ALA201 GLU202 VAL203 ARG204 ASN205 GLU206 GLY207 LEU208 HIS209 ASP210 PRO211 GLN212 LEU213 ALA214 THR215 LEU216 THR217 THR218 LYS219 LYS220 GLY221 THR222 VAL223 ILE224 GLN225 VAL226 LEU227 VAL228 HIS229 VAL230 THR231 ALA232 GLN233 TYR234 GLY235 TYR236 GLU237 VAL238 LYS239 LEU240 GLU241 VAL242 ILE243 GLY244 GLU245 THR246 GLY247 GLU248 LEU249 GLN250 LEU251 PRO252 ASN253 TYR254 GLY255 LEU256 GLY257 PRO258 ILE259 LEU260 ARG261 SER262 ASN263 ALA264 ASN265 GLN266 GLN267 THR268 ALA269 VAL270 GLU271 MET272 SER273 TRP274 ILE275 ASN276 ARG277 PHE278 ILE279 GLN280 ALA281 TYR282 ASN283 THR284 GLU285 VAL286 GLN287 GLU288 PHE289 ILE290 ASP291 GLU292 VAL293 ALA294 LYS295 SER296 GLU297 PRO298 PRO299 VAL300 GLY301 PRO302 SER303 ALA304 TRP305 ASP306 GLY307 TYR308 ILE309 ALA310 ALA311 ILE312 THR313 ALA314 ALA315 ALA316 ALA317 ASN318 ARG319 SER320 GLN321 LYS322 ASP323 GLN324 GLU325 THR326 VAL327 LEU328 ILE329 ASN330 VAL331 ALA332 GLY333 THR334 PRO335 THR336 PHE337 TYR338 GLN339
Unit 4 MET1 VAL2 VAL3 LYS4 VAL5 GLY6 VAL7 ILE8 GLY9 THR10 GLY11 ALA12 MET13 GLY14 ARG15 ALA16 HIS17 ILE18 ASP19 ARG20 LEU21 THR22 ASN23 VAL24 LEU25 THR26 GLY27 ALA28 GLU29 VAL30 VAL31 ALA32 VAL33 THR34 ASP35 ILE36 ASP37 HIS38 GLU39 ALA40 ALA41 GLU42 ALA43 ALA44 VAL45 ARG46 ASP47 PHE48 HIS49 LEU50 ASN51 ALA52 LYS53 VAL54 TYR55 PRO56 ASP57 ASP58 THR59 SER60 LEU61 LEU62 GLN63 ASP64 PRO65 ASP66 ILE67 ASP68 ALA69 VAL70 PHE71 VAL72 VAL73 SER74 PHE75 GLY76 GLY77 ALA78 HIS79 GLU80 ALA81 THR82 VAL83 LEU84 LYS85 ALA86 LEU87 ASP88 THR89 ASP90 LYS91 PHE92 ILE93 PHE94 THR95 GLU96 LYS97 PRO98 LEU99 ALA100 THR101 THR102 LEU103 GLU104 GLY105 ALA106 LYS107 ARG108 ILE109 VAL110 ASP111 LYS112 GLU113 LEU114 THR115 LYS116 SER117 LYS118 LYS119 VAL120 ILE121 GLN122 VAL123 GLY124 PHE125 MET126 ARG127 ARG128 TYR129 ASP130 GLN131 GLY132 ILE133 ARG134 ALA135 LEU136 LYS137 GLU138 LYS139 LEU140 ASP141 THR142 GLY143 ILE144 ILE145 GLY146 ALA147 PRO148 LEU149 VAL150 VAL151 ARG152 ALA153 SER154 HIS155 ILE156 ASN157 PRO158 ASN159 VAL160 ALA161 SER162 ASN163 TYR164 SER165 ASN166 GLU167 MET168 ALA169 ILE170 THR171 ASP172 THR173 LEU174 ILE175 HIS176 GLU177 ILE178 ASP179 GLU180 MET181 HIS182 TRP183 LEU184 LEU185 ASP186 ASP187 GLU188 TYR189 THR190 SER191 ILE192 GLN193 ILE194 THR195 TYR196 PRO197 ARG198 GLN199 SER200 ALA201 GLU202 VAL203 ARG204 ASN205 GLU206 GLY207 LEU208 HIS209 ASP210 PRO211 GLN212 LEU213 ALA214 THR215 LEU216 THR217 THR218 LYS219 LYS220 GLY221 THR222 VAL223 ILE224 GLN225 VAL226 LEU227 VAL228 HIS229 VAL230 THR231 ALA232 GLN233 TYR234 GLY235 TYR236 GLU237 VAL238 LYS239 LEU240 GLU241 VAL242 ILE243 GLY244 GLU245 THR246 GLY247 GLU248 LEU249 GLN250 LEU251 PRO252 ASN253 TYR254 GLY255 LEU256 GLY257 PRO258 ILE259 LEU260 ARG261 SER262 ASN263 ALA264 ASN265 GLN266 GLN267 THR268 ALA269 VAL270 GLU271 MET272 SER273 TRP274 ILE275 ASN276 ARG277 PHE278 ILE279 GLN280 ALA281 TYR282 ASN283 THR284 GLU285 VAL286 GLN287 GLU288 PHE289 ILE290 ASP291 GLU292 VAL293 ALA294 LYS295 SER296 GLU297 PRO298 PRO299 VAL300 GLY301 PRO302 SER303 ALA304 TRP305 ASP306 GLY307 TYR308 ILE309 ALA310 ALA311 ILE312 THR313 ALA314 ALA315 ALA316 ALA317 ASN318 ARG319 SER320 GLN321 LYS322 ASP323 GLN324 GLU325 THR326 VAL327 LEU328 ILE329 ASN330 VAL331 ALA332 GLY333 THR334 PRO335 THR336 PHE337 TYR338 GLN339

Ligands
Unit 5 NAD401 GOL402 GOL403 SO4404 SO4405 SO4406
Unit 6 NAD401 GOL402
Unit 7 NAD401 GOL402 SO4403 SO4404
Unit 8 NAD401 GOL402 SO4403

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany