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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF CED-4 BOUND CED-3 FRAGMENT
Keywords APOPTOSOME, APOPTOSIS
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   4M9X     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   CELL DEATH PROTEIN 4  A 510 4088 0
2  Protein   CED-3 FRAGMENT  C 7 57 0
3  Protein   CELL DEATH PROTEIN 4  B 511 4094 0
4  Protein   CED-3 FRAGMENT  D 5 46 0
5  Ligand   CELL DEATH PROTEIN 4  A 2 0 32
6  Ligand   CELL DEATH PROTEIN 4  B 2 0 32
total       1037 8285 64
Proteins
Unit 1 MET1 LEU2 CYS3 GLU4 ILE5 GLU6 CYS7 ARG8 ALA9 LEU10 SER11 THR12 ALA13 HIS14 THR15 ARG16 LEU17 ILE18 HIS19 ASP20 PHE21 GLU22 PRO23 ARG24 ASP25 ALA26 LEU27 THR28 TYR29 LEU30 GLU31 GLY32 LYS33 ASN34 ILE35 PHE36 THR37 GLU38 ASP39 HIS40 SER41 GLU42 LEU43 ILE44 SER45 LYS46 MET47 SER48 THR49 ARG50 LEU51 GLU52 ARG53 ILE54 ALA55 ASN56 PHE57 LEU58 ARG59 ILE60 TYR61 ARG62 ARG63 GLN64 ALA65 SER66 GLU67 LEU68 GLY69 PRO70 LEU71 ILE72 ASP73 PHE74 PHE75 ASN76 TYR77 ASN78 ASN79 GLN80 SER81 HIS82 LEU83 ALA84 ASP85 PHE86 LEU87 GLU88 ASP89 TYR90 ILE91 ASP92 PHE93 ALA94 ILE95 ASN96 GLU97 PRO98 ASP99 LEU100 LEU101 ARG102 PRO103 VAL104 VAL105 ILE106 ALA107 PRO108 GLN109 PHE110 SER111 ARG112 GLN113 MET114 LEU115 ASP116 ARG117 LYS118 LEU119 LEU120 LEU121 GLY122 ASN123 VAL124 PRO125 LYS126 GLN127 MET128 THR129 CYS130 TYR131 ILE132 ARG133 GLU134 TYR135 HIS136 VAL137 ASP138 ARG139 VAL140 ILE141 LYS142 LYS143 LEU144 ASP145 GLU146 MET147 CYS148 ASP149 LEU150 ASP151 SER152 PHE153 PHE154 LEU155 PHE156 LEU157 HIS158 GLY159 ARG160 ALA161 GLY162 SER163 GLY164 LYS165 SER166 VAL167 ILE168 ALA169 SER170 GLN171 ALA172 LEU173 SER174 LYS175 SER176 ASP177 GLN178 LEU179 ILE180 GLY181 ILE182 ASN183 TYR184 ASP185 SER186 ILE187 VAL188 TRP189 LEU190 LYS191 ASP192 SER193 GLY194 THR195 ALA196 PRO197 LYS198 SER199 THR200 PHE201 ASP202 LEU203 PHE204 THR205 ASP206 ILE207 LEU208 LEU209 MET210 LEU211 LYS212 SER213 GLU214 ASP215 ASP216 LEU217 LEU218 ASN219 PHE220 PRO221 SER222 VAL223 GLU224 HIS225 VAL226 THR227 SER228 VAL229 VAL230 LEU231 LYS232 ARG233 MET234 ILE235 CYS236 ASN237 ALA238 LEU239 ILE240 ASP241 ARG242 PRO243 ASN244 THR245 LEU246 PHE247 VAL248 PHE249 ASP250 ASP251 VAL252 VAL253 GLN254 GLU255 GLU256 THR257 ILE258 ARG259 TRP260 ALA261 GLN262 GLU263 LEU264 ARG265 LEU266 ARG267 CYS268 LEU269 VAL270 THR271 THR272 ARG273 ASP274 VAL275 GLU276 ILE277 SER278 ASN279 ALA280 ALA281 SER282 GLN283 THR284 CYS285 GLU286 PHE287 ILE288 GLU289 VAL290 THR291 SER292 LEU293 GLU294 ILE295 ASP296 GLU297 CYS298 TYR299 ASP300 PHE301 LEU302 GLU303 ALA304 TYR305 GLY306 MET307 PRO308 MET309 PRO310 VAL311 GLY312 GLU313 LYS314 GLU315 GLU316 ASP317 VAL318 LEU319 ASN320 LYS321 THR322 ILE323 GLU324 LEU325 SER326 SER327 GLY328 ASN329 PRO330 ALA331 THR332 LEU333 MET334 MET335 PHE336 PHE337 LYS338 SER339 CYS340 GLU341 PRO342 LYS343 THR344 PHE345 GLU346 LYS347 MET348 ALA349 GLN350 LEU351 ASN352 ASN353 LYS354 LEU355 GLU356 SER357 ARG358 GLY359 LEU360 VAL361 GLY362 VAL363 GLU364 CYS365 ILE366 THR367 PRO368 TYR369 SER370 TYR371 LYS372 SER373 LEU374 ALA375 MET376 ALA377 LEU378 GLN379 ARG380 CYS381 VAL382 GLU383 VAL384 LEU385 SER386 ASP387 GLU388 ASP389 ARG390 SER391 ALA392 LEU393 ALA394 PHE395 ALA396 VAL397 VAL398 MET399 PRO400 PRO401 GLY402 VAL403 ASP404 ILE405 PRO406 VAL407 LYS408 LEU409 TRP410 SER411 CYS412 VAL413 ILE414 PRO415 VAL416 ASP417 GLU424 GLN425 LEU426 ASP427 ASP428 GLU429 VAL430 ALA431 ASP432 ARG433 LEU434 LYS435 ARG436 LEU437 SER438 LYS439 ARG440 GLY441 ALA442 LEU443 LEU444 SER445 GLY446 LYS447 ARG448 MET449 PRO450 VAL451 LEU452 THR453 PHE454 LYS455 ILE456 ASP457 HIS458 ILE459 ILE460 HIS461 MET462 PHE463 LEU464 LYS465 HIS466 VAL467 VAL468 ASP469 ALA470 GLN471 THR472 ILE473 ALA474 ASN475 GLY476 ILE477 SER478 ILE479 LEU480 GLU481 GLN482 ARG483 LEU484 LEU485 GLU486 ILE487 GLU521 THR522 VAL523 ILE524 ARG525 PRO526 GLU527 ASP528 PHE529 PRO530 LYS531 PHE532 MET533 GLN534 LEU535 HIS536 GLN537 LYS538 PHE539 TYR540 ASP541 SER542 LEU543 LYS544 ASN545 PHE546 ALA547 CYS548 CYS549
Unit 2 PRO748 LEU749 PHE750 ASN751 PHE752 LEU753 CYS754
Unit 3 MET1 LEU2 CYS3 GLU4 ILE5 GLU6 CYS7 ARG8 ALA9 LEU10 SER11 THR12 ALA13 HIS14 THR15 ARG16 LEU17 ILE18 HIS19 ASP20 PHE21 GLU22 PRO23 ARG24 ASP25 ALA26 LEU27 THR28 TYR29 LEU30 GLU31 GLY32 LYS33 ASN34 ILE35 PHE36 THR37 GLU38 ASP39 HIS40 SER41 GLU42 LEU43 ILE44 SER45 LYS46 MET47 SER48 THR49 ARG50 LEU51 GLU52 ARG53 ILE54 ALA55 ASN56 PHE57 LEU58 ARG59 ILE60 TYR61 ARG62 ARG63 GLN64 ALA65 SER66 GLU67 LEU68 GLY69 PRO70 LEU71 ILE72 ASP73 PHE74 PHE75 ASN76 TYR77 ASN78 ASN79 GLN80 SER81 HIS82 LEU83 ALA84 ASP85 PHE86 LEU87 GLU88 ASP89 TYR90 ILE91 ASP92 PHE93 ALA94 ILE95 ASN96 GLU97 PRO98 ASP99 LEU100 LEU101 ARG102 PRO103 VAL104 VAL105 ILE106 ALA107 PRO108 GLN109 PHE110 SER111 ARG112 GLN113 MET114 LEU115 ASP116 ARG117 LYS118 LEU119 LEU120 LEU121 GLY122 ASN123 VAL124 PRO125 LYS126 GLN127 MET128 THR129 CYS130 TYR131 ILE132 ARG133 GLU134 TYR135 HIS136 VAL137 ASP138 ARG139 VAL140 ILE141 LYS142 LYS143 LEU144 ASP145 GLU146 MET147 CYS148 ASP149 LEU150 ASP151 SER152 PHE153 PHE154 LEU155 PHE156 LEU157 HIS158 GLY159 ARG160 ALA161 GLY162 SER163 GLY164 LYS165 SER166 VAL167 ILE168 ALA169 SER170 GLN171 ALA172 LEU173 SER174 LYS175 SER176 ASP177 GLN178 LEU179 ILE180 GLY181 ILE182 ASN183 TYR184 ASP185 SER186 ILE187 VAL188 TRP189 LEU190 LYS191 ASP192 SER193 GLY194 THR195 ALA196 PRO197 LYS198 SER199 THR200 PHE201 ASP202 LEU203 PHE204 THR205 ASP206 ILE207 LEU208 LEU209 MET210 LEU211 LYS212 SER213 GLU214 ASP215 ASP216 LEU217 LEU218 ASN219 PHE220 PRO221 SER222 VAL223 GLU224 HIS225 VAL226 THR227 SER228 VAL229 VAL230 LEU231 LYS232 ARG233 MET234 ILE235 CYS236 ASN237 ALA238 LEU239 ILE240 ASP241 ARG242 PRO243 ASN244 THR245 LEU246 PHE247 VAL248 PHE249 ASP250 ASP251 VAL252 VAL253 GLN254 GLU255 GLU256 THR257 ILE258 ARG259 TRP260 ALA261 GLN262 GLU263 LEU264 ARG265 LEU266 ARG267 CYS268 LEU269 VAL270 THR271 THR272 ARG273 ASP274 VAL275 GLU276 ILE277 SER278 ASN279 ALA280 ALA281 SER282 GLN283 THR284 CYS285 GLU286 PHE287 ILE288 GLU289 VAL290 THR291 SER292 LEU293 GLU294 ILE295 ASP296 GLU297 CYS298 TYR299 ASP300 PHE301 LEU302 GLU303 ALA304 TYR305 GLY306 MET307 PRO308 MET309 PRO310 VAL311 GLY312 GLU313 LYS314 GLU315 GLU316 ASP317 VAL318 LEU319 ASN320 LYS321 THR322 ILE323 GLU324 LEU325 SER326 SER327 GLY328 ASN329 PRO330 ALA331 THR332 LEU333 MET334 MET335 PHE336 PHE337 LYS338 SER339 CYS340 GLU341 PRO342 LYS343 THR344 PHE345 GLU346 LYS347 MET348 ALA349 GLN350 LEU351 ASN352 ASN353 LYS354 LEU355 GLU356 SER357 ARG358 GLY359 LEU360 VAL361 GLY362 VAL363 GLU364 CYS365 ILE366 THR367 PRO368 TYR369 SER370 TYR371 LYS372 SER373 LEU374 ALA375 MET376 ALA377 LEU378 GLN379 ARG380 CYS381 VAL382 GLU383 VAL384 LEU385 SER386 ASP387 GLU388 ASP389 ARG390 SER391 ALA392 LEU393 ALA394 PHE395 ALA396 VAL397 VAL398 MET399 PRO400 PRO401 GLY402 VAL403 ASP404 ILE405 PRO406 VAL407 LYS408 LEU409 TRP410 SER411 CYS412 VAL413 ILE414 PRO415 VAL416 LEU426 ASP427 ASP428 GLU429 VAL430 ALA431 ASP432 ARG433 LEU434 LYS435 ARG436 LEU437 SER438 LYS439 ARG440 GLY441 ALA442 LEU443 LEU444 SER445 GLY446 LYS447 ARG448 MET449 PRO450 VAL451 LEU452 THR453 PHE454 LYS455 ILE456 ASP457 HIS458 ILE459 ILE460 HIS461 MET462 PHE463 LEU464 LYS465 HIS466 VAL467 VAL468 ASP469 ALA470 GLN471 THR472 ILE473 ALA474 ASN475 GLY476 ILE477 SER478 ILE479 LEU480 GLU481 GLN482 ARG483 LEU484 LEU485 GLU486 ILE487 GLY488 ASN489 ASN490 ASN491 GLU521 THR522 VAL523 ILE524 ARG525 PRO526 GLU527 ASP528 PHE529 PRO530 LYS531 PHE532 MET533 GLN534 LEU535 HIS536 GLN537 LYS538 PHE539 TYR540 ASP541 SER542 LEU543 LYS544 ASN545 PHE546 ALA547 CYS548 CYS549
Unit 4 LEU749 PHE750 ASN751 PHE752 LEU753
Ligands
Unit 5 MG601 ATP602
Unit 6 MG601 ATP602
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany