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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE OF KLF4 ZINC FINGER DNA BINDING DOMAIN IN COMPLEX METHYLATED DNA
Keywords DNA METHYLATION, TRANSCRIPTION FACTOR, CELLULAR REPROGRAMMIN ZINC FINGER, DNA BINDING, TRANSCRIPTION-DNA COMPLEX
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4M9E     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   KRUEPPEL-LIKE FACTOR 4  A 85 694 0
2  Other macromolecule   DNA (5'-D(*GP*AP*GP*GP*(5CM)P*GP*TP*GP*GP*C)-3')  B 10 189 20
3  Other macromolecule   DNA (5'-D(*GP*CP*CP*AP*(5CM)P*GP*CP*CP*TP*C)-3')  C 10 177 20
4  Ligand   KRUEPPEL-LIKE FACTOR 4  A 5 0 13
5 Water     134 0 134
total       244 1060 187

Proteins
Unit 1 THR399 HIS400 THR401 CYS402 ASP403 TYR404 ALA405 GLY406 CYS407 GLY408 LYS409 THR410 TYR411 THR412 LYS413 SER414 SER415 HIS416 LEU417 LYS418 ALA419 HIS420 LEU421 ARG422 THR423 HIS424 THR425 GLY426 GLU427 LYS428 PRO429 TYR430 HIS431 CYS432 ASP433 TRP434 ASP435 GLY436 CYS437 GLY438 TRP439 LYS440 PHE441 ALA442 ARG443 SER444 ASP445 GLU446 LEU447 THR448 ARG449 HIS450 TYR451 ARG452 LYS453 HIS454 THR455 GLY456 HIS457 ARG458 PRO459 PHE460 GLN461 CYS462 GLN463 LYS464 CYS465 ASP466 ARG467 ALA468 PHE469 SER470 ARG471 SER472 ASP473 HIS474 LEU475 ALA476 LEU477 HIS478 MET479 LYS480 ARG481 HIS482 PHE483

Other macromolecules
Unit 2 DG1 DA2 DG3 DG4 5CM5 DG6 DT7 DG8 DG9 DC10
Unit 3 DG1 DC2 DC3 DA4 5CM5 DG6 DC7 DC8 DT9 DC10

Ligands
Unit 4 GOL501 ACT502 ZN503 ZN504 ZN505

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany