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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF LSM1-7 COMPLEX
Keywords SM LIKE PROTEIN, RNA SPLICING, STRUCTURAL PROTEIN, RNA BINDI PROTEIN
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4M75     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM1  A 139 1097 48
2  Protein   U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM2  B 91 720 24
3  Protein   U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM3  C 70 545 8
4  Protein   U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM6  D 72 545 16
5  Protein   U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM5  E 75 572 16
6  Protein   U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM7  F 75 499 24
7  Protein   U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM4  G 82 635 24
8  Protein   U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM1  H 134 988 48
9  Protein   U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM2  I 86 677 16
10  Protein   U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM3  J 75 579 8
11  Protein   U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM6  K 71 509 16
12  Protein   U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM5  L 75 571 16
13  Protein   U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM7  M 62 436 24
14  Protein   U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM4  N 82 632 24
15  Ligand   U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM2  B 1 0 1
16  Ligand   U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM3  C 1 0 1
total       1191 9005 314

Proteins
Unit 1 ASP32 LEU33 TYR34 LEU35 ASP36 GLN37 TYR38 ASN39 PHE40 THR41 THR42 THR43 ALA44 ALA45 ILE46 VAL47 SER48 SER49 VAL50 ASP51 ARG52 LYS53 ILE54 PHE55 VAL56 LEU57 LEU58 ARG59 ASP60 GLY61 ARG62 MSE63 LEU64 PHE65 GLY66 VAL67 LEU68 ARG69 THR70 PHE71 ASP72 GLN73 TYR74 ALA75 ASN76 LEU77 ILE78 LEU79 GLN80 ASP81 CYS82 VAL83 GLU84 ARG85 ILE86 TYR87 PHE88 SER89 GLU90 GLU91 ASN92 LYS93 TYR94 ALA95 GLU96 GLU97 ASP98 ARG99 GLY100 ILE101 PHE102 MSE103 ILE104 ARG105 GLY106 GLU107 ASN108 VAL109 VAL110 MSE111 LEU112 GLY113 GLU114 VAL115 ASP116 ILE117 ASP118 LYS119 GLU120 ASP121 GLN122 PRO123 LEU124 MSE127 GLU128 ARG129 ILE130 PRO131 PHE132 LYS133 GLU134 ALA135 TRP136 LEU137 THR138 LYS139 GLN140 LYS141 ASN142 ASP143 GLU144 LYS145 ARG146 PHE147 LYS148 GLU149 GLU150 THR151 HIS152 LYS153 GLY154 LYS155 LYS156 MSE157 ALA158 ARG159 HIS160 GLY161 ILE162 VAL163 TYR164 ASP165 PHE166 HIS167 LYS168 SER169 ASP170 MSE171 TYR172
Unit 2 MSE1 LEU2 PHE3 PHE4 SER5 PHE6 PHE7 LYS8 THR9 LEU10 VAL11 ASP12 GLN13 GLU14 VAL15 VAL16 VAL17 GLU18 LEU19 LYS20 ASN21 ASP22 ILE23 GLU24 ILE25 LYS26 GLY27 THR28 LEU29 GLN30 SER31 VAL32 ASP33 GLN34 PHE35 LEU36 ASN37 LEU38 LYS39 LEU40 ASP41 ASN42 ILE43 SER44 SER45 THR46 ASP47 GLU48 LYS49 LYS50 TYR51 PRO52 HIS53 LEU54 GLY55 SER56 VAL57 ARG58 ASN59 ILE60 PHE61 ILE62 ARG63 GLY64 SER65 THR66 VAL67 ARG68 TYR69 VAL70 TYR71 LEU72 ASN73 LYS74 ASN75 MSE76 VAL77 ASP78 THR79 ASN80 LEU81 LEU82 GLN83 ASP84 ALA85 THR86 ARG87 ARG88 GLU89 VAL90 MSE91
Unit 3 PRO4 LEU5 ASP6 LEU7 LEU8 LYS9 LEU10 ASN11 LEU12 ASP13 GLU14 ARG15 VAL16 TYR17 ILE18 LYS19 LEU20 ARG21 GLY22 ALA23 ARG24 THR25 LEU26 VAL27 GLY28 THR29 LEU30 GLN31 ALA32 PHE33 ASP34 SER35 HIS36 SER37 ASN38 ILE39 VAL40 LEU41 SER42 ASP43 ALA44 VAL45 GLU46 THR47 ILE48 TYR49 GLN50 SER57 GLU58 SER59 GLU60 ARG61 ARG62 SER63 GLU64 MSE65 VAL66 PHE67 ILE68 ARG69 GLY70 ASP71 THR72 VAL73 THR74 LEU75 ILE76 SER77 THR78 PRO79
Unit 4 GLU14 PHE15 LEU16 SER17 ASP18 ILE19 ILE20 GLY21 LYS22 THR23 VAL24 ASN25 VAL26 LYS27 LEU28 ALA29 SER30 GLY31 LEU32 LEU33 TYR34 SER35 GLY36 ARG37 LEU38 GLU39 SER40 ILE41 ASP42 GLY43 PHE44 MSE45 ASN46 VAL47 ALA48 LEU49 SER50 SER51 ALA52 THR53 GLU54 HIS55 TYR56 GLU57 SER58 ASN59 ASN60 ASN61 LYS62 LEU63 LEU64 ASN65 LYS66 PHE67 ASN68 SER69 ASP70 VAL71 PHE72 LEU73 ARG74 GLY75 THR76 GLN77 VAL78 MSE79 TYR80 ILE81 SER82 GLU83 GLN84 LYS85
Unit 5 ILE6 LEU7 PRO8 LEU9 GLU10 VAL11 ILE12 ASP13 LYS14 THR15 ILE16 ASN17 GLN18 LYS19 VAL20 LEU21 ILE22 VAL23 LEU24 GLN25 SER26 ASN27 ARG28 GLU29 PHE30 GLU31 GLY32 THR33 LEU34 VAL35 GLY36 PHE37 ASP38 ASP39 PHE40 VAL41 ASN42 VAL43 ILE44 LEU45 GLU46 ASP47 ALA48 VAL49 GLU50 TRP51 LEU52 ILE53 ASP54 SER59 ARG60 ASN61 GLU62 LYS63 VAL64 MSE65 GLN66 HIS67 HIS68 GLY69 ARG70 MSE71 LEU72 LEU73 SER74 GLY75 ASN76 ASN77 ILE78 ALA79 ILE80 LEU81 VAL82 PRO83 GLY84
Unit 6 ARG16 LYS17 LYS18 PHE19 GLU20 GLY21 PRO22 ARG24 GLU25 ALA26 ILE27 LEU28 ASP29 LEU30 ALA31 LYS32 TYR33 LYS34 ASP35 SER36 LYS37 ILE38 ARG39 VAL40 LYS41 LEU42 MSE43 GLY44 GLY45 LYS46 LEU47 VAL48 ILE49 GLY50 VAL51 LEU52 LYS53 GLY54 TYR55 ASP56 GLN57 LEU58 MSE59 ASN60 LEU61 VAL62 LEU63 ASP64 ASP65 THR66 VAL67 GLU68 TYR69 MSE70 SER71 ALA86 ARG87 LYS88 LEU89 GLY90 LEU91 THR92 VAL93 ILE94 ARG95 GLY96 THR97 ILE98 LEU99 VAL100 SER101 LEU102 SER103 SER104 ALA105
Unit 7 ASN-6 LEU-5 TYR-4 PHE-3 GLN-2 GLY-1 SER0 MSE1 LEU2 PRO3 LEU4 TYR5 LEU6 LEU7 THR8 ASN9 ALA10 LYS11 GLY12 GLN13 GLN14 MSE15 GLN16 ILE17 GLU18 LEU19 LYS20 ASN21 GLY22 GLU23 ILE24 ILE25 GLN26 GLY27 ILE28 LEU29 THR30 ASN31 VAL32 ASP33 ASN34 TRP35 MSE36 ASN37 LEU38 THR39 LEU40 SER41 ASN42 VAL43 THR44 GLU45 TYR46 SER47 VAL64 LYS65 LEU66 ASN67 GLU68 ILE69 TYR70 ILE71 ARG72 GLY73 THR74 PHE75 ILE76 LYS77 PHE78 ILE79 LYS80 LEU81 GLN82 ASP83 ASN84 ILE85 ILE86 ASP87 LYS88 VAL89 LYS90 GLN91
Unit 8 TYR38 ASN39 PHE40 THR41 THR42 THR43 ALA44 ALA45 ILE46 VAL47 SER48 SER49 VAL50 ASP51 ARG52 LYS53 ILE54 PHE55 VAL56 LEU57 LEU58 ARG59 ASP60 GLY61 ARG62 MSE63 LEU64 PHE65 GLY66 VAL67 LEU68 ARG69 THR70 PHE71 ASP72 GLN73 TYR74 ALA75 ASN76 LEU77 ILE78 LEU79 GLN80 ASP81 CYS82 VAL83 GLU84 ARG85 ILE86 TYR87 PHE88 SER89 GLU90 GLU91 ASN92 LYS93 TYR94 ALA95 GLU96 GLU97 ASP98 ARG99 GLY100 ILE101 PHE102 MSE103 ILE104 ARG105 GLY106 GLU107 ASN108 VAL109 VAL110 MSE111 LEU112 GLY113 GLU114 VAL115 ASP116 ILE117 ASP118 LYS119 GLU120 ASP121 GLN122 PRO123 LEU124 GLU125 ALA126 MSE127 GLU128 ARG129 ILE130 PRO131 PHE132 LYS133 GLU134 ALA135 TRP136 LEU137 THR138 LYS139 GLN140 LYS141 ASN142 ASP143 GLU144 LYS145 ARG146 PHE147 LYS148 GLU149 GLU150 THR151 HIS152 LYS153 GLY154 LYS155 LYS156 MSE157 ALA158 ARG159 HIS160 GLY161 ILE162 VAL163 TYR164 ASP165 PHE166 HIS167 LYS168 SER169 ASP170 MSE171
Unit 9 MSE1 LEU2 PHE3 PHE4 SER5 PHE6 PHE7 LYS8 THR9 LEU10 VAL11 ASP12 GLN13 GLU14 VAL15 VAL16 VAL17 GLU18 LEU19 LYS20 ASN21 ASP22 ILE23 GLU24 ILE25 LYS26 GLY27 THR28 LEU29 GLN30 SER31 VAL32 ASP33 GLN34 PHE35 LEU36 ASN37 LEU38 LYS39 LEU40 ASP41 ASN42 ILE43 SER44 SER45 THR46 ASP47 LYS50 TYR51 PRO52 HIS53 LEU54 GLY55 SER56 VAL57 ARG58 ASN59 ILE60 PHE61 ILE62 ARG63 GLY64 SER65 THR66 VAL67 ARG68 TYR69 VAL70 TYR71 LEU72 ASN73 LYS74 ASN75 MSE76 VAL77 ASP78 THR79 ASN80 LEU81 LEU82 GLN83 ASP84 ALA85 THR86 ARG87 ARG88
Unit 10 THR3 PRO4 LEU5 ASP6 LEU7 LEU8 LYS9 LEU10 ASN11 LEU12 ASP13 GLU14 ARG15 VAL16 TYR17 ILE18 LYS19 LEU20 ARG21 GLY22 ALA23 ARG24 THR25 LEU26 VAL27 GLY28 THR29 LEU30 GLN31 ALA32 PHE33 ASP34 SER35 HIS36 SER37 ASN38 ILE39 VAL40 LEU41 SER42 ASP43 ALA44 VAL45 GLU46 THR47 ILE48 TYR49 GLN50 LEU51 GLU54 GLU55 LEU56 SER57 GLU58 SER59 GLU60 ARG61 ARG62 SER63 GLU64 MSE65 VAL66 PHE67 ILE68 ARG69 GLY70 ASP71 THR72 VAL73 THR74 LEU75 ILE76 SER77 THR78 PRO79
Unit 11 SER10 VAL11 THR12 THR13 GLU14 PHE15 LEU16 SER17 ASP18 ILE19 ILE20 GLY21 LYS22 THR23 VAL24 ASN25 VAL26 LYS27 LEU28 ALA29 SER30 GLY31 LEU32 LEU33 TYR34 SER35 GLY36 ARG37 LEU38 GLU39 SER40 ILE41 ASP42 GLY43 PHE44 MSE45 ASN46 VAL47 ALA48 LEU49 SER50 SER51 ALA52 THR53 GLU54 HIS55 TYR56 GLU57 LYS62 LEU63 LEU64 ASN65 LYS66 PHE67 ASN68 SER69 ASP70 VAL71 PHE72 LEU73 ARG74 GLY75 THR76 GLN77 VAL78 MSE79 TYR80 ILE81 SER82 GLU83 GLN84
Unit 12 ILE6 LEU7 PRO8 LEU9 GLU10 VAL11 ILE12 ASP13 LYS14 THR15 ILE16 ASN17 GLN18 LYS19 VAL20 LEU21 ILE22 VAL23 LEU24 GLN25 SER26 ASN27 ARG28 GLU29 PHE30 GLU31 GLY32 THR33 LEU34 VAL35 GLY36 PHE37 ASP38 ASP39 PHE40 VAL41 ASN42 VAL43 ILE44 LEU45 GLU46 ASP47 ALA48 VAL49 GLU50 TRP51 LEU52 ILE53 ASP54 ARG60 ASN61 GLU62 LYS63 VAL64 MSE65 GLN66 HIS67 HIS68 GLY69 ARG70 MSE71 LEU72 LEU73 SER74 GLY75 ASN76 ASN77 ILE78 ALA79 ILE80 LEU81 VAL82 PRO83 GLY84 GLY85
Unit 13 ASP29 LEU30 ALA31 LYS32 TYR33 LYS34 ASP35 SER36 LYS37 ILE38 ARG39 VAL40 LYS41 LEU42 MSE43 GLY44 GLY45 LYS46 LEU47 VAL48 ILE49 GLY50 VAL51 LEU52 LYS53 GLY54 TYR55 ASP56 GLN57 LEU58 MSE59 ASN60 LEU61 VAL62 LEU63 ASP64 ASP65 THR66 VAL67 GLU68 TYR69 MSE70 SER71 ALA86 ARG87 LYS88 LEU89 GLY90 LEU91 THR92 VAL93 ILE94 ARG95 GLY96 THR97 ILE98 LEU99 VAL100 SER101 LEU102 SER103 SER104
Unit 14 GLU-7 ASN-6 LEU-5 TYR-4 PHE-3 GLN-2 GLY-1 SER0 MSE1 LEU2 PRO3 LEU4 TYR5 LEU6 LEU7 THR8 ASN9 ALA10 LYS11 GLY12 GLN13 GLN14 MSE15 GLN16 ILE17 GLU18 LEU19 LYS20 ASN21 GLY22 GLU23 ILE24 ILE25 GLN26 GLY27 ILE28 LEU29 THR30 ASN31 VAL32 ASP33 ASN34 TRP35 MSE36 ASN37 LEU38 THR39 LEU40 SER41 ASN42 VAL43 THR44 GLU45 VAL64 LYS65 LEU66 ASN67 GLU68 ILE69 TYR70 ILE71 ARG72 GLY73 THR74 PHE75 ILE76 LYS77 PHE78 ILE79 LYS80 LEU81 GLN82 ASP83 ASN84 ILE85 ILE86 ASP87 LYS88 VAL89 LYS90 GLN91 GLN92

Ligands
Unit 15 CL101
Unit 16 CL101

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany