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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF GATED-PORE MUTANT D138H OF SECOND DNA-B PROTEIN UNDER STARVATION FROM MYCOBACTERIUM SMEGMATIS
Keywords FERRITIN-LIKE FOLD, DNA BINDING, FERROXIDATION, IRON, DNA BI PROTEIN
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4M34     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   PUTATIVE STARVATION-INDUCED DNA PROTECTING PROTEI AND DPS  A 161 1236 0
2  Protein   PUTATIVE STARVATION-INDUCED DNA PROTECTING PROTEI AND DPS  B 158 1216 0
3  Protein   PUTATIVE STARVATION-INDUCED DNA PROTECTING PROTEI AND DPS  C 157 1211 0
4  Protein   PUTATIVE STARVATION-INDUCED DNA PROTECTING PROTEI AND DPS  D 159 1225 0
5  Ligand   PUTATIVE STARVATION-INDUCED DNA PROTECTING PROTEI AND DPS  A 5 0 5
6  Ligand   PUTATIVE STARVATION-INDUCED DNA PROTECTING PROTEI AND DPS  B 2 0 2
7  Ligand   PUTATIVE STARVATION-INDUCED DNA PROTECTING PROTEI AND DPS  C 1 0 1
8  Ligand   PUTATIVE STARVATION-INDUCED DNA PROTECTING PROTEI AND DPS  D 4 0 4
9 Water     327 0 327
total       974 4888 339

Proteins
Unit 1 MET1 SER2 ALA3 ARG4 ARG5 THR6 GLU7 SER8 ASP9 ILE10 GLN11 GLY12 PHE13 HIS14 ALA15 THR16 PRO17 GLU18 PHE19 GLY20 GLY21 ASN22 LEU23 GLN24 LYS25 VAL26 LEU27 VAL28 ASP29 LEU30 ILE31 GLU32 LEU33 SER34 LEU35 GLN36 GLY37 LYS38 GLN39 ALA40 HIS41 TRP42 ASN43 VAL44 VAL45 GLY46 SER47 ASN48 PHE49 ARG50 ASP51 LEU52 HIS53 LEU54 GLN55 LEU56 ASP57 GLU58 LEU59 VAL60 ASP61 PHE62 ALA63 ARG64 GLU65 GLY66 SER67 ASP68 THR69 ILE70 ALA71 GLU72 ARG73 MET74 ARG75 ALA76 LEU77 ASP78 ALA79 VAL80 PRO81 ASP82 GLY83 ARG84 SER85 ASP86 THR87 VAL88 ALA89 ALA90 THR91 THR92 THR93 LEU94 PRO95 GLU96 PHE97 PRO98 ALA99 PHE100 GLU101 ARG102 SER103 THR104 ALA105 ASP106 VAL107 VAL108 ASP109 LEU110 ILE111 THR112 THR113 ARG114 ILE115 ASN116 ALA117 THR118 VAL119 ASP120 THR121 ILE122 ARG123 ARG124 VAL125 HIS126 ASP127 ALA128 VAL129 ASP130 ALA131 GLU132 ASP133 PRO134 SER135 THR136 ALA137 HIS138 LEU139 LEU140 HIS141 GLY142 LEU143 ILE144 ASP145 GLY146 LEU147 GLU148 LYS149 GLN150 ALA151 TRP152 LEU153 ILE154 ARG155 SER156 GLU157 ASN158 ARG159 LYS160 VAL161
Unit 2 SER2 ALA3 ARG4 ARG5 THR6 GLU7 SER8 ILE10 GLY12 PHE13 HIS14 ALA15 THR16 PRO17 GLU18 PHE19 GLY20 GLY21 ASN22 LEU23 GLN24 LYS25 VAL26 LEU27 VAL28 ASP29 LEU30 ILE31 GLU32 LEU33 SER34 LEU35 GLN36 GLY37 LYS38 GLN39 ALA40 HIS41 TRP42 ASN43 VAL44 VAL45 GLY46 SER47 ASN48 PHE49 ARG50 ASP51 LEU52 HIS53 LEU54 GLN55 LEU56 ASP57 GLU58 LEU59 VAL60 ASP61 PHE62 ALA63 ARG64 GLU65 GLY66 SER67 ASP68 THR69 ILE70 ALA71 GLU72 ARG73 MET74 ARG75 ALA76 LEU77 ASP78 ALA79 VAL80 PRO81 ASP82 GLY83 ARG84 SER85 ASP86 THR87 VAL88 ALA89 ALA90 THR91 THR92 THR93 LEU94 PRO95 GLU96 PHE97 PRO98 ALA99 PHE100 GLU101 ARG102 SER103 THR104 ALA105 ASP106 VAL107 VAL108 ASP109 LEU110 ILE111 THR112 THR113 ARG114 ILE115 ASN116 ALA117 THR118 VAL119 ASP120 THR121 ILE122 ARG123 ARG124 VAL125 HIS126 ASP127 ALA128 VAL129 ASP130 ALA131 GLU132 ASP133 PRO134 SER135 THR136 ALA137 HIS138 LEU139 LEU140 HIS141 GLY142 LEU143 ILE144 ASP145 GLY146 LEU147 GLU148 LYS149 GLN150 ALA151 TRP152 LEU153 ILE154 ARG155 SER156 GLU157 ASN158 ARG159 LYS160 VAL161
Unit 3 SER2 ALA3 ARG4 ARG5 THR6 ILE10 GLN11 GLY12 PHE13 HIS14 ALA15 THR16 PRO17 GLU18 PHE19 GLY20 GLY21 ASN22 LEU23 GLN24 LYS25 VAL26 LEU27 VAL28 ASP29 LEU30 ILE31 GLU32 LEU33 SER34 LEU35 GLN36 GLY37 LYS38 GLN39 ALA40 HIS41 TRP42 ASN43 VAL44 VAL45 GLY46 SER47 ASN48 PHE49 ARG50 ASP51 LEU52 HIS53 LEU54 GLN55 LEU56 ASP57 GLU58 LEU59 VAL60 ASP61 PHE62 ALA63 ARG64 GLU65 GLY66 SER67 ASP68 THR69 ILE70 ALA71 GLU72 ARG73 MET74 ARG75 ALA76 LEU77 ASP78 ALA79 VAL80 PRO81 ASP82 GLY83 ARG84 SER85 ASP86 THR87 VAL88 ALA89 ALA90 THR91 THR92 THR93 LEU94 PRO95 GLU96 PHE97 PRO98 ALA99 PHE100 GLU101 ARG102 SER103 THR104 ALA105 ASP106 VAL107 VAL108 ASP109 LEU110 ILE111 THR112 THR113 ARG114 ILE115 ASN116 ALA117 THR118 VAL119 ASP120 THR121 ILE122 ARG123 ARG124 VAL125 HIS126 ASP127 ALA128 VAL129 ASP130 ALA131 GLU132 ASP133 PRO134 SER135 THR136 ALA137 HIS138 LEU139 LEU140 HIS141 GLY142 LEU143 ILE144 ASP145 GLY146 LEU147 GLU148 LYS149 GLN150 ALA151 TRP152 LEU153 ILE154 ARG155 SER156 GLU157 ASN158 ARG159 LYS160 VAL161
Unit 4 SER2 ALA3 ARG4 ARG5 THR6 GLU7 ASP9 ILE10 GLN11 GLY12 PHE13 HIS14 ALA15 THR16 PRO17 GLU18 PHE19 GLY20 GLY21 ASN22 LEU23 GLN24 LYS25 VAL26 LEU27 VAL28 ASP29 LEU30 ILE31 GLU32 LEU33 SER34 LEU35 GLN36 GLY37 LYS38 GLN39 ALA40 HIS41 TRP42 ASN43 VAL44 VAL45 GLY46 SER47 ASN48 PHE49 ARG50 ASP51 LEU52 HIS53 LEU54 GLN55 LEU56 ASP57 GLU58 LEU59 VAL60 ASP61 PHE62 ALA63 ARG64 GLU65 GLY66 SER67 ASP68 THR69 ILE70 ALA71 GLU72 ARG73 MET74 ARG75 ALA76 LEU77 ASP78 ALA79 VAL80 PRO81 ASP82 GLY83 ARG84 SER85 ASP86 THR87 VAL88 ALA89 ALA90 THR91 THR92 THR93 LEU94 PRO95 GLU96 PHE97 PRO98 ALA99 PHE100 GLU101 ARG102 SER103 THR104 ALA105 ASP106 VAL107 VAL108 ASP109 LEU110 ILE111 THR112 THR113 ARG114 ILE115 ASN116 ALA117 THR118 VAL119 ASP120 THR121 ILE122 ARG123 ARG124 VAL125 HIS126 ASP127 ALA128 VAL129 ASP130 ALA131 GLU132 ASP133 PRO134 SER135 THR136 ALA137 HIS138 LEU139 LEU140 HIS141 GLY142 LEU143 ILE144 ASP145 GLY146 LEU147 GLU148 LYS149 GLN150 ALA151 TRP152 LEU153 ILE154 ARG155 SER156 GLU157 ASN158 ARG159 LYS160 VAL161

Ligands
Unit 5 FE2201 MG202 MG203 MG204 CL205
Unit 6 FE2201 MG202
Unit 7 FE2201
Unit 8 FE2201 MG202 MG203 CL204

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany