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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE OF THE TOLL - SPATZLE COMPLEX, A MOLECULAR HUB IN DEVELOPMENT AND INNATE IMMUNITY (GLYCOSYLATED FORM)
Keywords TLR, LEUCINE-RICH REPEAT, IMMUNE SYSTEM, CYTOKINE RECEPTOR, DEVELOPMENT, INNATE IMMUNITY, RECEPTOR-LIGAND COMPLEX, IMMU SYSTEM-CYTOKINE COMPLEX
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   4LXS     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   PROTEIN TOLL  A 747 5977 0
2  Protein   PROTEIN SPAETZLE C-106  J 63 506 0
3  Protein   PROTEIN SPAETZLE C-106  K 65 503 0
4  Ligand    B 5 0 61
5  Ligand    C 2 0 28
6  Ligand    D 3 0 39
7  Ligand    E 2 0 28
8  Ligand    F 2 0 28
9  Ligand    G 2 0 28
10  Ligand    H 2 0 28
11  Ligand   PROTEIN TOLL  A 6 0 85
total       899 6986 325
Proteins
Unit 1 SER28 PHE29 GLY30 ARG31 ASP32 ALA33 CYS34 SER35 GLU36 ASP40 GLY41 LEU42 CYS43 GLN44 CYS45 ALA46 PRO47 ILE48 MET49 SER50 GLU51 TYR52 GLU53 ILE54 ILE55 CYS56 PRO57 ALA58 ASN59 ALA60 GLU61 ASN62 PRO63 THR64 PHE65 ARG66 LEU67 THR68 ILE69 GLN70 PRO71 LYS72 ASP73 TYR74 VAL75 GLN76 ILE77 MET78 CYS79 ASN80 LEU81 THR82 ASP83 THR84 THR85 ASP86 TYR87 GLN88 GLN89 LEU90 PRO91 LYS92 LYS93 LEU94 ARG95 ILE96 GLY97 GLU98 VAL99 ASP100 ARG101 VAL102 GLN103 MET104 ARG105 ARG106 CYS107 MET108 LEU109 PRO110 GLY111 HIS112 THR113 PRO114 ILE115 ALA116 SER117 ILE118 LEU119 ASP120 TYR121 LEU122 GLY123 ILE124 VAL125 SER126 PRO127 THR128 THR129 LEU130 ILE131 PHE132 GLU133 SER134 ASP135 ASN136 LEU137 GLY138 MET139 ASN140 ILE141 THR142 ARG143 GLN144 HIS145 LEU146 ASP147 ARG148 LEU149 HIS150 GLY151 LEU152 LYS153 ARG154 PHE155 ARG156 PHE157 THR158 THR159 ARG160 ARG161 LEU162 THR163 HIS164 ILE165 PRO166 ALA167 ASN168 LEU169 LEU170 THR171 ASP172 MET173 ARG174 ASN175 LEU176 SER177 HIS178 LEU179 GLU180 LEU181 ARG182 ALA183 ASN184 ILE185 GLU186 GLU187 MET188 PRO189 SER190 HIS191 LEU192 PHE193 ASP194 ASP195 LEU196 GLU197 ASN198 LEU199 GLU200 SER201 ILE202 GLU203 PHE204 GLY205 SER206 ASN207 LYS208 LEU209 ARG210 GLN211 MET212 PRO213 ARG214 GLY215 ILE216 PHE217 GLY218 LYS219 MET220 PRO221 LYS222 LEU223 LYS224 GLN225 LEU226 ASN227 LEU228 TRP229 SER230 ASN231 GLN232 LEU233 HIS234 ASN235 LEU236 THR237 LYS238 HIS239 ASP240 PHE241 GLU242 GLY243 ALA244 THR245 SER246 VAL247 LEU248 GLY249 ILE250 ASP251 ILE252 HIS253 ASP254 ASN255 GLY256 ILE257 GLU258 GLN259 LEU260 PRO261 HIS262 ASP263 VAL264 PHE265 ALA266 HIS267 LEU268 THR269 ASN270 VAL271 THR272 ASP273 ILE274 ASN275 LEU276 SER277 ALA278 ASN279 LEU280 PHE281 ARG282 SER283 LEU284 PRO285 GLN286 GLY287 LEU288 PHE289 ASP290 HIS291 ASN292 LYS293 HIS294 LEU295 ASN296 GLU297 VAL298 ARG299 LEU300 MET301 ASN302 ASN303 ARG304 VAL305 PRO306 LEU307 ALA308 THR309 LEU310 PRO311 SER312 ARG313 LEU314 PHE315 ALA316 ASN317 GLN318 PRO319 GLU320 LEU321 GLN322 ILE323 LEU324 ARG325 LEU326 ARG327 ALA328 GLU329 LEU330 GLN331 SER332 LEU333 PRO334 GLY335 ASP336 LEU337 PHE338 GLU339 HIS340 SER341 THR342 GLN343 ILE344 THR345 ASN346 ILE347 SER348 LEU349 GLY350 ASP351 ASN352 LEU353 LEU354 LYS355 THR356 LEU357 PRO358 ALA359 THR360 LEU361 LEU362 GLU363 HIS364 GLN365 VAL366 ASN367 LEU368 LEU369 SER370 LEU371 ASP372 LEU373 SER374 ASN375 ASN376 ARG377 LEU378 THR379 HIS380 LEU381 PRO382 ASP383 SER384 LEU385 PHE386 ALA387 HIS388 THR389 THR390 ASN391 LEU392 THR393 ASP394 LEU395 ARG396 LEU397 GLU398 ASP399 ASN400 LEU401 LEU402 THR403 GLY404 ILE405 SER406 GLY407 ASP408 ILE409 PHE410 SER411 ASN412 LEU413 GLY414 ASN415 LEU416 VAL417 THR418 LEU419 VAL420 MET421 SER422 ARG423 ASN424 ARG425 LEU426 ARG427 THR428 ILE429 ASP430 SER431 ARG432 ALA433 PHE434 VAL435 SER436 THR437 ASN438 GLY439 LEU440 ARG441 HIS442 LEU443 HIS444 LEU445 ASP446 HIS447 ASN448 ASP449 ILE450 ASP451 LEU452 GLN453 GLN454 PRO455 LEU456 LEU457 ASP458 ILE459 MET460 LEU461 GLN462 THR463 GLN464 ILE465 ASN466 SER467 PRO468 PHE469 GLY470 TYR471 MET472 HIS473 GLY474 LEU475 LEU476 THR477 LEU478 ASN479 LEU480 ARG481 ASN482 ASN483 SER484 ILE485 ILE486 PHE487 VAL488 TYR489 ASN490 ASP491 TRP492 LYS493 ASN494 THR495 MET496 LEU497 GLN498 LEU499 ARG500 GLU501 LEU502 ASP503 LEU504 SER505 TYR506 ASN507 ASN508 ILE509 SER510 SER511 LEU512 GLY513 TYR514 GLU515 ASP516 LEU517 ALA518 PHE519 LEU520 SER521 GLN522 ASN523 ARG524 LEU525 HIS526 VAL527 ASN528 MET529 THR530 HIS531 ASN532 LYS533 ILE534 ARG535 ARG536 ILE537 ALA538 LEU539 PRO540 GLU541 ASP542 VAL543 LEU553 VAL554 HIS555 VAL556 ASP557 LEU558 ASN559 ASP560 ASN561 PRO562 LEU563 VAL564 CYS565 ASP566 CYS567 THR568 ILE569 LEU570 TRP571 PHE572 ILE573 GLN574 LEU575 VAL576 ARG577 GLY578 VAL579 HIS580 LYS581 PRO582 GLN583 TYR584 SER585 ARG586 GLN587 PHE588 LYS589 LEU590 ARG591 THR592 ASP593 ARG594 LEU595 VAL596 CYS597 SER598 GLN599 PRO600 ASN601 VAL602 LEU603 GLU604 GLY605 THR606 PRO607 VAL608 ARG609 GLN610 ILE611 GLU612 PRO613 GLN614 THR615 LEU616 ILE617 CYS618 PRO619 LEU620 ASP621 LYS630 CYS631 PRO632 ARG633 GLY634 CYS635 ASN636 CYS637 HIS638 VAL639 ARG640 THR641 TYR642 ASP643 LYS644 ALA645 LEU646 VAL647 ILE648 ASN649 CYS650 HIS651 SER652 GLY653 ASN654 LEU655 THR656 HIS657 VAL658 PRO659 ARG660 LEU661 PRO662 ASN663 LEU664 HIS665 LYS666 ASN667 MET668 GLN669 LEU670 MET671 GLU672 LEU673 HIS674 LEU675 GLU676 ASN677 ASN678 THR679 LEU680 LEU681 ARG682 LEU683 PRO684 SER685 ALA686 ASN687 THR688 PRO689 GLY690 TYR691 GLU692 SER693 VAL694 THR695 SER696 LEU697 HIS698 LEU699 ALA700 GLY701 ASN702 ASN703 LEU704 THR705 SER706 ILE707 ASP708 VAL709 ASP710 GLN711 LEU712 PRO713 THR714 ASN715 LEU716 THR717 HIS718 LEU719 ASP720 ILE721 SER722 TRP723 ASN724 HIS725 LEU726 GLN727 MET728 LEU729 ASN730 ALA731 THR732 VAL733 LEU734 GLY735 PHE736 LEU737 ASN738 TRP743 ARG744 SER745 VAL746 LYS747 LEU748 SER749 GLY750 ASN751 PRO752 TRP753 MET754 CYS755 ASP756 CYS757 THR758 ALA759 LYS760 PRO761 LEU762 LEU763 LEU764 PHE765 THR766 GLN767 ASP768 ASN769 PHE770 GLU771 ARG772 ILE773 GLY774 ASP775 ARG776 ASN777 GLU778 MET779 MET780 CYS781 VAL782 ASN783 ALA784 PRO787 THR788 ARG789 MET790 VAL791 GLU792 LEU793 SER794 THR795 ASN796 ASP797 ILE798 CYS799 PRO800
Unit 2 ASP5 GLU6 ARG7 PHE8 LEU9 CYS10 ARG11 SER12 ILE13 ARG14 LYS15 LEU16 VAL17 TYR18 ILE42 GLN43 ILE44 GLU45 GLU46 CYS47 GLU48 GLY49 ALA50 ASP51 GLN52 PRO53 CYS54 ASP55 PHE56 ALA57 ALA58 ASN59 PHE60 PRO61 GLN62 SER63 TYR64 ASN65 PRO66 ILE67 CYS68 LYS69 GLN70 HIS71 TYR72 THR73 GLN74 LYS94 ILE95 PRO96 SER97 CYS98 CYS99 LYS100 CYS101 ALA102 LEU103 LYS104 THR105 GLY106 LEU107 GLU108 HIS109
Unit 3 VAL1 GLY2 GLY3 SER4 ASP5 GLU6 ARG7 PHE8 LEU9 CYS10 ARG11 SER12 ILE13 ARG14 LYS15 LEU16 LYS39 GLN40 ALA41 ILE42 GLN43 ILE44 GLU45 GLU46 CYS47 GLU48 GLY49 ALA50 ASP51 GLN52 PRO53 CYS54 ASP55 PHE56 ALA57 ALA58 ASN59 PHE60 PRO61 GLN62 SER63 TYR64 ASN65 PRO66 ILE67 CYS68 LYS69 GLN70 HIS71 TYR72 THR73 LYS94 ILE95 PRO96 SER97 CYS98 CYS99 LYS100 CYS101 ALA102 LEU103 LYS104 THR105 GLY106 LEU107
Ligands
Unit 4 NAG1 NAG2 BMA3 BMA4 MAN5
Unit 5 NAG1 NAG2
Unit 6 NAG1 NAG2 BMA3
Unit 7 NAG1 NAG2
Unit 8 NAG1 NAG2
Unit 9 NAG1 NAG2
Unit 10 NAG1 NAG2
Unit 11 NAG2006 NAG2007 NAG2021 NAG2022 NAG2023 EPE2024
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany