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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF E.COLI SBCD AT 2.5 ANGSTROM RESOLUTION
Keywords MEIOTIC RECOMBINATION 11 HOMOLOG, DOUBLE-STRAND BREAK REPAIR NUCLEASE ,ENDONUCLEASE ,EXONUCLEASE, HYDROLASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4LU9     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   EXONUCLEASE SUBUNIT SBCD  C 336 2559 0
2  Protein   EXONUCLEASE SUBUNIT SBCD  B 342 2579 0
3  Protein   EXONUCLEASE SUBUNIT SBCD  A 343 2611 0
4  Protein   EXONUCLEASE SUBUNIT SBCD  D 344 2583 0
5  Ligand   EXONUCLEASE SUBUNIT SBCD  C 1 0 6
6  Ligand   EXONUCLEASE SUBUNIT SBCD  B 1 0 6
7  Ligand   EXONUCLEASE SUBUNIT SBCD  A 1 0 6
8  Ligand   EXONUCLEASE SUBUNIT SBCD  D 1 0 6
9 Water     583 0 583
total       1952 10332 607

Proteins
Unit 1 ILE-2 GLU-1 PHE0 MET1 ARG2 ILE3 LEU4 HIS5 THR6 SER7 ASP8 TRP9 HIS10 LEU11 GLY12 GLN13 ASN14 PHE15 TYR16 SER17 LYS18 SER19 ARG20 GLU21 ALA22 GLU23 HIS24 GLN25 ALA26 PHE27 LEU28 ASP29 TRP30 LEU31 LEU32 GLU33 THR34 ALA35 GLN36 THR37 HIS38 GLN39 VAL40 ASP41 ALA42 ILE43 ILE44 VAL45 ALA46 GLY47 ASP48 VAL49 PHE50 ASP51 THR52 GLY53 SER54 PRO55 PRO56 SER57 TYR58 ALA59 ARG60 THR61 LEU62 TYR63 ASN64 ARG65 PHE66 VAL67 VAL68 ASN69 LEU70 GLN71 GLN72 THR73 GLY74 CYS75 HIS76 LEU77 VAL78 VAL79 LEU80 ALA81 GLY82 ASN83 HIS84 ASP85 SER86 VAL87 ALA88 THR89 LEU90 ASN91 GLU92 SER93 ARG94 ASP95 ILE96 MET97 ALA98 PHE99 LEU100 ASN101 THR102 THR103 VAL104 VAL105 ALA106 SER107 ALA108 GLY109 HIS110 ALA111 PRO112 GLN113 ILE114 LEU115 PRO116 ARG117 ARG118 ASP119 GLY120 THR121 PRO122 GLY123 ALA124 VAL125 LEU126 CYS127 PRO128 ILE129 PRO130 PHE131 LEU132 ARG133 PRO134 ARG135 ASP136 ILE137 ILE138 THR139 SER140 GLN141 ALA142 GLY143 LEU144 ASN145 GLY146 ILE147 GLU148 LYS149 GLN150 GLN151 HIS152 LEU153 LEU154 ALA155 ALA156 ILE157 THR158 ASP159 TYR160 TYR161 GLN162 GLN163 HIS164 TYR165 ALA166 ASP167 ALA168 CYS169 LYS170 LEU171 ARG172 GLY173 ASP174 GLN175 PRO176 LEU177 PRO178 ILE179 ILE180 ALA181 THR182 GLY183 HIS184 LEU185 THR186 THR187 VAL188 GLY189 ALA190 SER191 LYS192 SER193 ASP194 ALA195 VAL196 ARG197 ASP198 ILE199 TYR200 ILE201 GLY202 THR203 LEU204 ASP205 ALA206 PHE207 PRO208 ALA209 GLN210 ASN211 PHE212 PRO213 PRO214 ALA215 ASP216 TYR217 ILE218 ALA219 LEU220 GLY221 HIS222 ILE223 HIS224 ARG225 ALA226 GLN227 ILE228 ILE229 GLY230 GLY231 MET232 GLU233 HIS234 VAL235 ARG236 TYR237 CYS238 GLY239 SER240 PRO241 ILE242 PRO243 LEU244 SER245 PHE246 ASP247 GLU248 CYS249 GLY250 LYS251 SER252 LYS253 TYR254 VAL255 HIS256 LEU257 VAL258 THR259 PHE260 SER261 ASN262 GLY263 LYS264 LEU265 GLU266 SER267 VAL268 GLU269 ASN270 LEU271 ASN272 VAL273 PRO274 VAL275 THR276 GLN277 PRO278 MET279 ALA280 VAL281 LEU282 LYS283 GLY284 ASP285 LEU286 ALA287 SER288 ILE289 THR290 ALA291 GLN292 LEU293 GLU294 GLN295 TRP296 PRO303 PRO304 VAL305 TRP306 LEU307 ASP308 ILE309 GLU310 ILE311 THR312 THR313 ASP314 GLU315 TYR316 LEU317 HIS318 ASP319 ILE320 GLN321 ARG322 LYS323 ILE324 GLN325 ALA326 LEU327 THR328 GLU329 SER330 LEU331 PRO332 VAL333 GLU334 VAL335 LEU336 LEU337 VAL338 ARG339
Unit 2 GLU-1 PHE0 MET1 ARG2 ILE3 LEU4 HIS5 THR6 SER7 ASP8 TRP9 HIS10 LEU11 GLY12 GLN13 ASN14 PHE15 TYR16 SER17 LYS18 SER19 ARG20 GLU21 ALA22 GLU23 HIS24 GLN25 ALA26 PHE27 LEU28 ASP29 TRP30 LEU31 LEU32 GLU33 THR34 ALA35 GLN36 THR37 HIS38 GLN39 VAL40 ASP41 ALA42 ILE43 ILE44 VAL45 ALA46 GLY47 ASP48 VAL49 PHE50 ASP51 THR52 GLY53 SER54 PRO55 PRO56 SER57 TYR58 ALA59 ARG60 THR61 LEU62 TYR63 ASN64 ARG65 PHE66 VAL67 VAL68 ASN69 LEU70 GLN71 GLN72 THR73 GLY74 CYS75 HIS76 LEU77 VAL78 VAL79 LEU80 ALA81 GLY82 ASN83 HIS84 ASP85 SER86 VAL87 ALA88 THR89 LEU90 ASN91 GLU92 SER93 ARG94 ASP95 ILE96 MET97 ALA98 PHE99 LEU100 ASN101 THR102 THR103 VAL104 VAL105 ALA106 SER107 ALA108 GLY109 HIS110 ALA111 PRO112 GLN113 ILE114 LEU115 PRO116 ARG117 ARG118 ASP119 GLY120 THR121 PRO122 GLY123 ALA124 VAL125 LEU126 CYS127 PRO128 ILE129 PRO130 PHE131 LEU132 ARG133 PRO134 ARG135 ASP136 ILE137 ILE138 THR139 SER140 GLN141 ALA142 GLY143 LEU144 ASN145 GLY146 ILE147 GLU148 LYS149 GLN150 GLN151 HIS152 LEU153 LEU154 ALA155 ALA156 ILE157 THR158 ASP159 TYR160 TYR161 GLN162 GLN163 HIS164 TYR165 ALA166 ASP167 ALA168 CYS169 LYS170 LEU171 ARG172 GLY173 ASP174 GLN175 PRO176 LEU177 PRO178 ILE179 ILE180 ALA181 THR182 GLY183 HIS184 LEU185 THR186 THR187 VAL188 GLY189 ALA190 SER191 LYS192 SER193 ASP194 ALA195 VAL196 ARG197 ASP198 ILE199 TYR200 ILE201 GLY202 THR203 LEU204 ASP205 ALA206 PHE207 PRO208 ALA209 GLN210 ASN211 PHE212 PRO213 PRO214 ALA215 ASP216 TYR217 ILE218 ALA219 LEU220 GLY221 HIS222 ILE223 HIS224 ARG225 ALA226 GLN227 ILE228 ILE229 GLY230 GLY231 MET232 GLU233 HIS234 VAL235 ARG236 TYR237 CYS238 GLY239 SER240 PRO241 ILE242 PRO243 LEU244 SER245 PHE246 ASP247 GLU248 CYS249 GLY250 LYS251 SER252 LYS253 TYR254 VAL255 HIS256 LEU257 VAL258 THR259 PHE260 SER261 ASN262 GLY263 LYS264 LEU265 GLU266 SER267 VAL268 GLU269 ASN270 LEU271 ASN272 VAL273 PRO274 VAL275 THR276 GLN277 PRO278 MET279 ALA280 VAL281 LEU282 LYS283 GLY284 ASP285 LEU286 ALA287 SER288 ILE289 THR290 ALA291 GLN292 LEU293 GLU294 GLN295 TRP296 ARG297 ASP298 VAL299 SER300 GLN301 GLU302 PRO303 PRO304 VAL305 TRP306 LEU307 ASP308 ILE309 GLU310 ILE311 THR312 THR313 ASP314 GLU315 TYR316 LEU317 HIS318 ASP319 ILE320 GLN321 ARG322 LYS323 ILE324 GLN325 ALA326 LEU327 THR328 GLU329 SER330 LEU331 PRO332 VAL333 GLU334 VAL335 LEU336 LEU337 VAL338 ARG339 ARG340
Unit 3 ASP-3 ILE-2 GLU-1 PHE0 MET1 ARG2 ILE3 LEU4 HIS5 THR6 SER7 ASP8 TRP9 HIS10 LEU11 GLY12 GLN13 ASN14 PHE15 TYR16 SER17 LYS18 SER19 ARG20 GLU21 ALA22 GLU23 HIS24 GLN25 ALA26 PHE27 LEU28 ASP29 TRP30 LEU31 LEU32 GLU33 THR34 ALA35 GLN36 THR37 HIS38 GLN39 VAL40 ASP41 ALA42 ILE43 ILE44 VAL45 ALA46 GLY47 ASP48 VAL49 PHE50 ASP51 THR52 GLY53 SER54 PRO55 PRO56 SER57 TYR58 ALA59 ARG60 THR61 LEU62 TYR63 ASN64 ARG65 PHE66 VAL67 VAL68 ASN69 LEU70 GLN71 GLN72 THR73 GLY74 CYS75 HIS76 LEU77 VAL78 VAL79 LEU80 ALA81 GLY82 ASN83 HIS84 ASP85 SER86 VAL87 ALA88 THR89 LEU90 ASN91 GLU92 SER93 ARG94 ASP95 ILE96 MET97 ALA98 PHE99 LEU100 ASN101 THR102 THR103 VAL104 VAL105 ALA106 SER107 ALA108 GLY109 HIS110 ALA111 PRO112 GLN113 ILE114 LEU115 PRO116 ARG117 ARG118 ASP119 GLY120 THR121 PRO122 GLY123 ALA124 VAL125 LEU126 CYS127 PRO128 ILE129 PRO130 PHE131 LEU132 ARG133 PRO134 ARG135 ASP136 ILE137 ILE138 THR139 SER140 GLN141 ALA142 GLY143 LEU144 ASN145 GLY146 ILE147 GLU148 LYS149 GLN150 GLN151 HIS152 LEU153 LEU154 ALA155 ALA156 ILE157 THR158 ASP159 TYR160 TYR161 GLN162 GLN163 HIS164 TYR165 ALA166 ASP167 ALA168 CYS169 LYS170 LEU171 ARG172 GLY173 ASP174 GLN175 PRO176 LEU177 PRO178 ILE179 ILE180 ALA181 THR182 GLY183 HIS184 LEU185 THR186 THR187 VAL188 GLY189 ALA190 SER191 LYS192 SER193 ASP194 ALA195 VAL196 ARG197 ASP198 ILE199 TYR200 ILE201 GLY202 THR203 LEU204 ASP205 ALA206 PHE207 PRO208 ALA209 GLN210 ASN211 PHE212 PRO213 PRO214 ALA215 ASP216 TYR217 ILE218 ALA219 LEU220 GLY221 HIS222 ILE223 HIS224 ARG225 ALA226 GLN227 ILE228 ILE229 GLY230 GLY231 MET232 GLU233 HIS234 VAL235 ARG236 TYR237 CYS238 GLY239 SER240 PRO241 ILE242 PRO243 LEU244 SER245 PHE246 ASP247 GLU248 CYS249 GLY250 LYS251 SER252 LYS253 TYR254 VAL255 HIS256 LEU257 VAL258 THR259 PHE260 SER261 ASN262 GLY263 LYS264 LEU265 GLU266 SER267 VAL268 GLU269 ASN270 LEU271 ASN272 VAL273 PRO274 VAL275 THR276 GLN277 PRO278 MET279 ALA280 VAL281 LEU282 LYS283 GLY284 ASP285 LEU286 ALA287 SER288 ILE289 THR290 ALA291 GLN292 LEU293 GLU294 GLN295 TRP296 ARG297 ASP298 VAL299 SER300 GLN301 GLU302 PRO303 PRO304 VAL305 TRP306 LEU307 ASP308 ILE309 GLU310 ILE311 THR312 THR313 ASP314 GLU315 TYR316 LEU317 HIS318 ASP319 ILE320 GLN321 ARG322 LYS323 ILE324 GLN325 ALA326 LEU327 THR328 GLU329 SER330 LEU331 PRO332 VAL333 GLU334 VAL335 LEU336 LEU337 VAL338 ARG339
Unit 4 ASP-3 ILE-2 GLU-1 PHE0 MET1 ARG2 ILE3 LEU4 HIS5 THR6 SER7 ASP8 TRP9 HIS10 LEU11 GLY12 GLN13 ASN14 PHE15 TYR16 SER17 LYS18 SER19 ARG20 GLU21 ALA22 GLU23 HIS24 GLN25 ALA26 PHE27 LEU28 ASP29 TRP30 LEU31 LEU32 GLU33 THR34 ALA35 GLN36 THR37 HIS38 GLN39 VAL40 ASP41 ALA42 ILE43 ILE44 VAL45 ALA46 GLY47 ASP48 VAL49 PHE50 ASP51 THR52 GLY53 SER54 PRO55 PRO56 SER57 TYR58 ALA59 ARG60 THR61 LEU62 TYR63 ASN64 ARG65 PHE66 VAL67 VAL68 ASN69 LEU70 GLN71 GLN72 THR73 GLY74 CYS75 HIS76 LEU77 VAL78 VAL79 LEU80 ALA81 GLY82 ASN83 HIS84 ASP85 SER86 VAL87 ALA88 THR89 LEU90 ASN91 GLU92 SER93 ARG94 ASP95 ILE96 MET97 ALA98 PHE99 LEU100 ASN101 THR102 THR103 VAL104 VAL105 ALA106 SER107 ALA108 GLY109 HIS110 ALA111 PRO112 GLN113 ILE114 LEU115 PRO116 ARG117 ARG118 ASP119 GLY120 THR121 PRO122 GLY123 ALA124 VAL125 LEU126 CYS127 PRO128 ILE129 PRO130 PHE131 LEU132 ARG133 PRO134 ARG135 ASP136 ILE137 ILE138 THR139 SER140 GLN141 ALA142 GLY143 LEU144 ASN145 GLY146 ILE147 GLU148 LYS149 GLN150 GLN151 HIS152 LEU153 LEU154 ALA155 ALA156 ILE157 THR158 ASP159 TYR160 TYR161 GLN162 GLN163 HIS164 TYR165 ALA166 ASP167 ALA168 CYS169 LYS170 LEU171 ARG172 GLY173 ASP174 GLN175 PRO176 LEU177 PRO178 ILE179 ILE180 ALA181 THR182 GLY183 HIS184 LEU185 THR186 THR187 VAL188 GLY189 ALA190 SER191 LYS192 SER193 ASP194 ALA195 VAL196 ARG197 ASP198 ILE199 TYR200 ILE201 GLY202 THR203 LEU204 ASP205 ALA206 PHE207 PRO208 ALA209 GLN210 ASN211 PHE212 PRO213 PRO214 ALA215 ASP216 TYR217 ILE218 ALA219 LEU220 GLY221 HIS222 ILE223 HIS224 ARG225 ALA226 GLN227 ILE228 ILE229 GLY230 GLY231 MET232 GLU233 HIS234 VAL235 ARG236 TYR237 CYS238 GLY239 SER240 PRO241 ILE242 PRO243 LEU244 SER245 PHE246 ASP247 GLU248 CYS249 GLY250 LYS251 SER252 LYS253 TYR254 VAL255 HIS256 LEU257 VAL258 THR259 PHE260 SER261 ASN262 GLY263 LYS264 LEU265 GLU266 SER267 VAL268 GLU269 ASN270 LEU271 ASN272 VAL273 PRO274 VAL275 THR276 GLN277 PRO278 MET279 ALA280 VAL281 LEU282 LYS283 GLY284 ASP285 LEU286 ALA287 SER288 ILE289 THR290 ALA291 GLN292 LEU293 GLU294 GLN295 TRP296 ARG297 ASP298 VAL299 SER300 GLN301 GLU302 PRO303 PRO304 VAL305 TRP306 LEU307 ASP308 ILE309 GLU310 ILE311 THR312 THR313 ASP314 GLU315 TYR316 LEU317 HIS318 ASP319 ILE320 GLN321 ARG322 LYS323 ILE324 GLN325 ALA326 LEU327 THR328 GLU329 SER330 LEU331 PRO332 VAL333 GLU334 VAL335 LEU336 LEU337 VAL338 ARG339 ARG340

Ligands
Unit 5 GOL401
Unit 6 GOL401
Unit 7 GOL401
Unit 8 GOL401

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany