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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF L-LACTATE DEHYDROGENASE FROM BACILLUS C 14579 COMPLEXED WITH CALCIUM, NYSGRC TARGET 029452
Keywords STRUCTURAL GENOMICS, PROTEIN STRUCTURE INITIATIVE, NYSGRC, P BIOLOGY, NEW YORK STRUCTURAL GENOMICS RESEARCH CONSORTIUM, OXIDOREDUCTASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   4LN1     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   L-LACTATE DEHYDROGENASE 1  A 317 2427 56
2  Protein   L-LACTATE DEHYDROGENASE 1  B 321 2456 56
3  Protein   L-LACTATE DEHYDROGENASE 1  C 316 2418 56
4  Protein   L-LACTATE DEHYDROGENASE 1  D 315 2411 56
5  Ligand   L-LACTATE DEHYDROGENASE 1  A 2 0 2
6  Ligand   L-LACTATE DEHYDROGENASE 1  B 2 0 2
7  Ligand   L-LACTATE DEHYDROGENASE 1  C 1 0 1
8  Ligand   L-LACTATE DEHYDROGENASE 1  D 1 0 1
9 Water     351 0 351
total       1626 9712 581
Proteins
Unit 1 GLU-6 ASN-5 LEU-4 TYR-3 PHE-2 GLN-1 SER0 MSE1 LYS2 LYS3 GLY4 ILE5 ASN6 ARG7 VAL8 VAL9 LEU10 VAL11 GLY12 THR13 GLY14 ALA15 VAL16 GLY17 CYS18 SER19 TYR20 ALA21 TYR22 CYS23 MSE24 ILE25 ASN26 GLN27 ALA28 VAL29 ALA30 GLU31 GLU32 PHE33 VAL34 LEU35 VAL36 ASP37 VAL38 ASN39 GLU40 ALA41 LYS42 ALA43 GLU44 GLY45 GLU46 ALA47 MSE48 ASP49 LEU50 SER51 HIS52 ALA53 VAL54 PRO55 PHE56 ALA57 PRO58 ALA59 PRO60 THR61 ARG62 VAL63 TRP64 LYS65 GLY66 SER67 TYR68 GLU69 ASP70 CYS71 LYS72 ASP73 ALA74 ASP75 LEU76 VAL77 VAL78 ILE79 THR80 ALA81 GLY82 LEU83 PRO84 GLN85 THR90 ARG91 LEU92 ASP93 LEU94 VAL95 GLU96 LYS97 ASN98 ALA99 LYS100 ILE101 PHE102 LYS103 GLN104 ILE105 VAL106 ARG107 SER108 ILE109 MSE110 ASP111 SER112 GLY113 PHE114 ASP115 GLY116 ILE117 PHE118 LEU119 ILE120 ALA121 THR122 ASN123 PRO124 VAL125 ASP126 ILE127 LEU128 THR129 TYR130 VAL131 THR132 TRP133 LYS134 GLU135 SER136 GLY137 LEU138 PRO139 LYS140 GLU141 ARG142 VAL143 ILE144 GLY145 SER146 GLY147 THR148 THR149 LEU150 ASP151 SER152 ALA153 ARG154 PHE155 ARG156 TYR157 MSE158 LEU159 GLY160 GLU161 TYR162 PHE163 ASP164 ILE165 GLY166 PRO167 HIS168 ASN169 ILE170 HIS171 ALA172 TYR173 ILE174 ILE175 GLY176 GLU177 HIS178 GLY179 ASP180 THR181 GLU182 LEU183 PRO184 VAL185 TRP186 SER187 HIS188 VAL189 SER190 VAL191 GLY192 ILE193 GLN194 LYS195 LEU196 GLN197 THR198 LEU199 LEU200 GLU201 LYS202 ASP203 ASN204 THR205 TYR206 ASN207 GLN208 GLU209 ASP210 LEU211 ASP212 LYS213 ILE214 PHE215 ILE216 ASN217 VAL218 ARG219 ASP220 ALA221 ALA222 TYR223 HIS224 ILE225 ILE226 GLU227 ARG228 LYS229 GLY230 ALA231 THR232 TYR233 TYR234 GLY235 ILE236 GLY237 MSE238 SER239 LEU240 LEU241 ARG242 VAL243 THR244 LYS245 ALA246 ILE247 LEU248 ASN249 ASP250 GLU251 ASN252 SER253 VAL254 LEU255 THR256 VAL257 SER258 ALA259 TYR260 LEU261 GLU262 GLY263 GLN264 TYR265 GLY266 GLN267 LYS268 ASP269 VAL270 TYR271 ILE272 GLY273 VAL274 PRO275 ALA276 VAL277 LEU278 ASN279 ARG280 GLY281 GLY282 VAL283 ARG284 GLU285 ILE286 LEU287 GLU288 VAL289 GLU290 LEU291 SER292 GLU293 ASP294 GLU295 GLU296 LEU297 LYS298 PHE299 ASP300 HIS301 SER302 VAL303 GLN304 VAL305 LEU306 LYS307 GLU308 THR309 MSE310 ALA311 PRO312 VAL313 LEU314
Unit 2 GLU-6 ASN-5 LEU-4 TYR-3 PHE-2 GLN-1 SER0 MSE1 LYS2 LYS3 GLY4 ILE5 ASN6 ARG7 VAL8 VAL9 LEU10 VAL11 GLY12 THR13 GLY14 ALA15 VAL16 GLY17 CYS18 SER19 TYR20 ALA21 TYR22 CYS23 MSE24 ILE25 ASN26 GLN27 ALA28 VAL29 ALA30 GLU31 GLU32 PHE33 VAL34 LEU35 VAL36 ASP37 VAL38 ASN39 GLU40 ALA41 LYS42 ALA43 GLU44 GLY45 GLU46 ALA47 MSE48 ASP49 LEU50 SER51 HIS52 ALA53 VAL54 PRO55 PHE56 ALA57 PRO58 ALA59 PRO60 THR61 ARG62 VAL63 TRP64 LYS65 GLY66 SER67 TYR68 GLU69 ASP70 CYS71 LYS72 ASP73 ALA74 ASP75 LEU76 VAL77 VAL78 ILE79 THR80 ALA81 GLY82 LEU83 PRO84 GLN85 LYS86 PRO87 GLY88 GLU89 THR90 ARG91 LEU92 ASP93 LEU94 VAL95 GLU96 LYS97 ASN98 ALA99 LYS100 ILE101 PHE102 LYS103 GLN104 ILE105 VAL106 ARG107 SER108 ILE109 MSE110 ASP111 SER112 GLY113 PHE114 ASP115 GLY116 ILE117 PHE118 LEU119 ILE120 ALA121 THR122 ASN123 PRO124 VAL125 ASP126 ILE127 LEU128 THR129 TYR130 VAL131 THR132 TRP133 LYS134 GLU135 SER136 GLY137 LEU138 PRO139 LYS140 GLU141 ARG142 VAL143 ILE144 GLY145 SER146 GLY147 THR148 THR149 LEU150 ASP151 SER152 ALA153 ARG154 PHE155 ARG156 TYR157 MSE158 LEU159 GLY160 GLU161 TYR162 PHE163 ASP164 ILE165 GLY166 PRO167 HIS168 ASN169 ILE170 HIS171 ALA172 TYR173 ILE174 ILE175 GLY176 GLU177 HIS178 GLY179 ASP180 THR181 GLU182 LEU183 PRO184 VAL185 TRP186 SER187 HIS188 VAL189 SER190 VAL191 GLY192 ILE193 GLN194 LYS195 LEU196 GLN197 THR198 LEU199 LEU200 GLU201 LYS202 ASP203 ASN204 THR205 TYR206 ASN207 GLN208 GLU209 ASP210 LEU211 ASP212 LYS213 ILE214 PHE215 ILE216 ASN217 VAL218 ARG219 ASP220 ALA221 ALA222 TYR223 HIS224 ILE225 ILE226 GLU227 ARG228 LYS229 GLY230 ALA231 THR232 TYR233 TYR234 GLY235 ILE236 GLY237 MSE238 SER239 LEU240 LEU241 ARG242 VAL243 THR244 LYS245 ALA246 ILE247 LEU248 ASN249 ASP250 GLU251 ASN252 SER253 VAL254 LEU255 THR256 VAL257 SER258 ALA259 TYR260 LEU261 GLU262 GLY263 GLN264 TYR265 GLY266 GLN267 LYS268 ASP269 VAL270 TYR271 ILE272 GLY273 VAL274 PRO275 ALA276 VAL277 LEU278 ASN279 ARG280 GLY281 GLY282 VAL283 ARG284 GLU285 ILE286 LEU287 GLU288 VAL289 GLU290 LEU291 SER292 GLU293 ASP294 GLU295 GLU296 LEU297 LYS298 PHE299 ASP300 HIS301 SER302 VAL303 GLN304 VAL305 LEU306 LYS307 GLU308 THR309 MSE310 ALA311 PRO312 VAL313 LEU314
Unit 3 GLU-6 ASN-5 LEU-4 TYR-3 PHE-2 GLN-1 SER0 MSE1 LYS2 LYS3 GLY4 ILE5 ASN6 ARG7 VAL8 VAL9 LEU10 VAL11 GLY12 THR13 GLY14 ALA15 VAL16 GLY17 CYS18 SER19 TYR20 ALA21 TYR22 CYS23 MSE24 ILE25 ASN26 GLN27 ALA28 VAL29 ALA30 GLU31 GLU32 PHE33 VAL34 LEU35 VAL36 ASP37 VAL38 ASN39 GLU40 ALA41 LYS42 ALA43 GLU44 GLY45 GLU46 ALA47 MSE48 ASP49 LEU50 SER51 HIS52 ALA53 VAL54 PRO55 PHE56 ALA57 PRO58 ALA59 PRO60 THR61 ARG62 VAL63 TRP64 LYS65 GLY66 SER67 TYR68 GLU69 ASP70 CYS71 LYS72 ASP73 ALA74 ASP75 LEU76 VAL77 VAL78 ILE79 THR80 ALA81 GLY82 LEU83 PRO84 THR90 ARG91 LEU92 ASP93 LEU94 VAL95 GLU96 LYS97 ASN98 ALA99 LYS100 ILE101 PHE102 LYS103 GLN104 ILE105 VAL106 ARG107 SER108 ILE109 MSE110 ASP111 SER112 GLY113 PHE114 ASP115 GLY116 ILE117 PHE118 LEU119 ILE120 ALA121 THR122 ASN123 PRO124 VAL125 ASP126 ILE127 LEU128 THR129 TYR130 VAL131 THR132 TRP133 LYS134 GLU135 SER136 GLY137 LEU138 PRO139 LYS140 GLU141 ARG142 VAL143 ILE144 GLY145 SER146 GLY147 THR148 THR149 LEU150 ASP151 SER152 ALA153 ARG154 PHE155 ARG156 TYR157 MSE158 LEU159 GLY160 GLU161 TYR162 PHE163 ASP164 ILE165 GLY166 PRO167 HIS168 ASN169 ILE170 HIS171 ALA172 TYR173 ILE174 ILE175 GLY176 GLU177 HIS178 GLY179 ASP180 THR181 GLU182 LEU183 PRO184 VAL185 TRP186 SER187 HIS188 VAL189 SER190 VAL191 GLY192 ILE193 GLN194 LYS195 LEU196 GLN197 THR198 LEU199 LEU200 GLU201 LYS202 ASP203 ASN204 THR205 TYR206 ASN207 GLN208 GLU209 ASP210 LEU211 ASP212 LYS213 ILE214 PHE215 ILE216 ASN217 VAL218 ARG219 ASP220 ALA221 ALA222 TYR223 HIS224 ILE225 ILE226 GLU227 ARG228 LYS229 GLY230 ALA231 THR232 TYR233 TYR234 GLY235 ILE236 GLY237 MSE238 SER239 LEU240 LEU241 ARG242 VAL243 THR244 LYS245 ALA246 ILE247 LEU248 ASN249 ASP250 GLU251 ASN252 SER253 VAL254 LEU255 THR256 VAL257 SER258 ALA259 TYR260 LEU261 GLU262 GLY263 GLN264 TYR265 GLY266 GLN267 LYS268 ASP269 VAL270 TYR271 ILE272 GLY273 VAL274 PRO275 ALA276 VAL277 LEU278 ASN279 ARG280 GLY281 GLY282 VAL283 ARG284 GLU285 ILE286 LEU287 GLU288 VAL289 GLU290 LEU291 SER292 GLU293 ASP294 GLU295 GLU296 LEU297 LYS298 PHE299 ASP300 HIS301 SER302 VAL303 GLN304 VAL305 LEU306 LYS307 GLU308 THR309 MSE310 ALA311 PRO312 VAL313 LEU314
Unit 4 GLU-6 ASN-5 LEU-4 TYR-3 PHE-2 GLN-1 SER0 MSE1 LYS2 LYS3 GLY4 ILE5 ASN6 ARG7 VAL8 VAL9 LEU10 VAL11 GLY12 THR13 GLY14 ALA15 VAL16 GLY17 CYS18 SER19 TYR20 ALA21 TYR22 CYS23 MSE24 ILE25 ASN26 GLN27 ALA28 VAL29 ALA30 GLU31 GLU32 PHE33 VAL34 LEU35 VAL36 ASP37 VAL38 ASN39 GLU40 ALA41 LYS42 ALA43 GLU44 GLY45 GLU46 ALA47 MSE48 ASP49 LEU50 SER51 HIS52 ALA53 VAL54 PRO55 PHE56 ALA57 PRO58 ALA59 PRO60 THR61 ARG62 VAL63 TRP64 LYS65 GLY66 SER67 TYR68 GLU69 ASP70 CYS71 LYS72 ASP73 ALA74 ASP75 LEU76 VAL77 VAL78 ILE79 THR80 ALA81 GLY82 LEU83 PRO84 ARG91 LEU92 ASP93 LEU94 VAL95 GLU96 LYS97 ASN98 ALA99 LYS100 ILE101 PHE102 LYS103 GLN104 ILE105 VAL106 ARG107 SER108 ILE109 MSE110 ASP111 SER112 GLY113 PHE114 ASP115 GLY116 ILE117 PHE118 LEU119 ILE120 ALA121 THR122 ASN123 PRO124 VAL125 ASP126 ILE127 LEU128 THR129 TYR130 VAL131 THR132 TRP133 LYS134 GLU135 SER136 GLY137 LEU138 PRO139 LYS140 GLU141 ARG142 VAL143 ILE144 GLY145 SER146 GLY147 THR148 THR149 LEU150 ASP151 SER152 ALA153 ARG154 PHE155 ARG156 TYR157 MSE158 LEU159 GLY160 GLU161 TYR162 PHE163 ASP164 ILE165 GLY166 PRO167 HIS168 ASN169 ILE170 HIS171 ALA172 TYR173 ILE174 ILE175 GLY176 GLU177 HIS178 GLY179 ASP180 THR181 GLU182 LEU183 PRO184 VAL185 TRP186 SER187 HIS188 VAL189 SER190 VAL191 GLY192 ILE193 GLN194 LYS195 LEU196 GLN197 THR198 LEU199 LEU200 GLU201 LYS202 ASP203 ASN204 THR205 TYR206 ASN207 GLN208 GLU209 ASP210 LEU211 ASP212 LYS213 ILE214 PHE215 ILE216 ASN217 VAL218 ARG219 ASP220 ALA221 ALA222 TYR223 HIS224 ILE225 ILE226 GLU227 ARG228 LYS229 GLY230 ALA231 THR232 TYR233 TYR234 GLY235 ILE236 GLY237 MSE238 SER239 LEU240 LEU241 ARG242 VAL243 THR244 LYS245 ALA246 ILE247 LEU248 ASN249 ASP250 GLU251 ASN252 SER253 VAL254 LEU255 THR256 VAL257 SER258 ALA259 TYR260 LEU261 GLU262 GLY263 GLN264 TYR265 GLY266 GLN267 LYS268 ASP269 VAL270 TYR271 ILE272 GLY273 VAL274 PRO275 ALA276 VAL277 LEU278 ASN279 ARG280 GLY281 GLY282 VAL283 ARG284 GLU285 ILE286 LEU287 GLU288 VAL289 GLU290 LEU291 SER292 GLU293 ASP294 GLU295 GLU296 LEU297 LYS298 PHE299 ASP300 HIS301 SER302 VAL303 GLN304 VAL305 LEU306 LYS307 GLU308 THR309 MSE310 ALA311 PRO312 VAL313 LEU314
Ligands
Unit 5 CA500 CA501
Unit 6 CA500 CA501
Unit 7 CA501
Unit 8 CA501
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany