[Image Library Home] | [Image Library Entry] |
Title | CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF RLUB IN COMPLEX 21-NUCLEOTIDE RNA SUBSTRATE | |
Keywords | BETA SHEET ALPHA-BETA PROTEIN, RRNA MODIFICATION PEUDOURIDIN SYNTHASE, E. COLI RIBOSOMAL RNA, ISOMERASE-RNA COMPLEX | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 4LGT | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Protein | RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE B | A | 251 | 3964 | 14 |
2 | RNA | E | 21 | 651 | 31 | |
3 | Protein | RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE B | D | 247 | 3846 | 14 |
4 | RNA | F | 20 | 618 | 33 | |
5 | Water | 630 | 0 | 630 | ||
total | 1169 | 9079 | 722 |
Unit 1 | MET1 SER2 GLU3 LYS4 LEU5 GLN6 LYS7 VAL8 LEU9 ALA10 ARG11 ALA12 GLY13 HIS14 GLY15 SER16 ARG17 ARG18 GLU19 ILE20 GLU21 SER22 ILE23 ILE24 GLU25 ALA26 GLY27 ARG28 VAL29 SER30 VAL31 ASP32 GLY33 LYS34 ILE35 ALA36 LYS37 LEU38 GLY39 ASP40 ARG41 VAL42 GLU43 VAL44 THR45 PRO46 GLY47 LEU48 LYS49 ILE50 ARG51 ILE52 ASP53 GLY54 HIS55 LEU56 ILE57 SER58 VAL59 ARG60 GLU61 SER62 ALA63 GLU64 GLN65 ILE66 CYS67 ARG68 VAL69 LEU70 ALA71 TYR72 TYR73 LYS74 PRO75 GLU76 GLY77 GLU78 LEU79 CYS80 THR81 ARG82 ASN83 ASP84 PRO85 GLU86 GLY87 ARG88 PRO89 THR90 VAL91 PHE92 ASP93 ARG94 LEU95 PRO96 LYS97 LEU98 ARG99 GLY100 ALA101 ARG102 TRP103 ILE104 ALA105 VAL106 GLY107 ARG108 LEU109 ASP110 VAL111 ASN112 THR113 OCS114 GLY115 LEU116 LEU117 LEU118 PHE119 THR120 THR121 ASP122 GLY123 GLU124 LEU125 ALA126 ASN127 ARG128 LEU129 MET130 HIS131 PRO132 SER133 ARG134 GLU135 VAL136 GLU137 ARG138 GLU139 TYR140 ALA141 VAL142 ARG143 VAL144 PHE145 GLY146 GLN147 VAL148 ASP149 ASP150 ALA151 LYS152 LEU153 ARG154 ASP155 LEU156 SER157 ARG158 GLY159 VAL160 GLN161 LEU162 GLU163 ASP164 GLY165 PRO166 ALA167 ALA168 PHE169 LYS170 THR171 ILE172 LYS173 PHE174 SER175 GLY176 GLY177 GLU178 GLY179 ILE180 ASN181 GLN182 TRP183 TYR184 ASN185 VAL186 THR187 LEU188 THR189 GLU190 GLY191 ARG192 ASN193 ARG194 GLU195 VAL196 ARG197 ARG198 LEU199 TRP200 GLU201 ALA202 VAL203 GLY204 VAL205 GLN206 VAL207 SER208 ARG209 LEU210 ILE211 ARG212 VAL213 ARG214 TYR215 GLY216 ASP217 ILE218 PRO219 LEU220 PRO221 LYS222 GLY223 LEU224 PRO225 ARG226 GLY227 GLY228 TRP229 THR230 GLU231 LEU232 ASP233 LEU234 ALA235 GLN236 THR237 ASN238 TYR239 LEU240 ARG241 GLU242 LEU243 VAL244 GLU245 LEU246 PRO247 PRO248 GLU249 THR250 SER251 |
Unit 3 | MET1 SER2 GLU3 LYS4 LEU5 GLN6 LYS7 VAL8 LEU9 ALA10 ARG11 ALA12 GLY13 HIS14 GLY15 SER16 ARG17 ARG18 GLU19 ILE20 GLU21 SER22 ILE23 ILE24 GLU25 ALA26 GLY27 ARG28 VAL29 SER30 VAL31 ASP32 GLY33 LYS34 ILE35 ALA36 LYS37 LEU38 GLY39 ASP40 ARG41 VAL42 GLU43 VAL44 THR45 PRO46 GLY47 LEU48 LYS49 ILE50 ARG51 ILE52 ASP53 GLY54 HIS55 LEU56 ILE57 SER58 VAL59 ARG60 GLU61 SER62 ILE66 CYS67 ARG68 VAL69 LEU70 ALA71 TYR72 TYR73 LYS74 PRO75 GLU76 GLY77 GLU78 LEU79 CYS80 THR81 ARG82 ASN83 ASP84 PRO85 GLU86 GLY87 ARG88 PRO89 THR90 VAL91 PHE92 ASP93 ARG94 LEU95 PRO96 LYS97 LEU98 ARG99 GLY100 ALA101 ARG102 TRP103 ILE104 ALA105 VAL106 GLY107 ARG108 LEU109 ASP110 VAL111 ASN112 THR113 OCS114 GLY115 LEU116 LEU117 LEU118 PHE119 THR120 THR121 ASP122 GLY123 GLU124 LEU125 ALA126 ASN127 ARG128 LEU129 MET130 HIS131 PRO132 SER133 ARG134 GLU135 VAL136 GLU137 ARG138 GLU139 TYR140 ALA141 VAL142 ARG143 VAL144 PHE145 GLY146 GLN147 VAL148 ASP149 ASP150 ALA151 LYS152 LEU153 ARG154 ASP155 LEU156 SER157 ARG158 GLY159 VAL160 GLN161 LEU162 GLU163 ASP164 GLY165 PRO166 ALA167 ALA168 PHE169 LYS170 THR171 ILE172 LYS173 PHE174 SER175 GLY176 GLY177 GLU178 GLY179 ILE180 ASN181 GLN182 TRP183 TYR184 ASN185 VAL186 THR187 LEU188 THR189 GLU190 GLY191 ARG192 ASN193 ARG194 GLU195 VAL196 ARG197 ARG198 LEU199 TRP200 GLU201 ALA202 VAL203 GLY204 VAL205 GLN206 VAL207 SER208 ARG209 LEU210 ILE211 ARG212 VAL213 ARG214 TYR215 GLY216 ASP217 ILE218 PRO219 LEU220 PRO221 LYS222 GLY223 LEU224 PRO225 ARG226 GLY227 GLY228 TRP229 THR230 GLU231 LEU232 ASP233 LEU234 ALA235 GLN236 THR237 ASN238 TYR239 LEU240 ARG241 GLU242 LEU243 VAL244 GLU245 LEU246 PRO247 PRO248 GLU249 THR250 |
Unit 2 | A2587 G2588 A2589 A2590 C2591 G2592 U2593 C2594 G2595 U2596 G2597 A2598 G2599 A2600 C2601 A2602 G2603 U2604 FHU2605 C2606 G2607 |
Unit 4 | G2588 A2589 A2590 C2591 G2592 U2593 C2594 G2595 U2596 G2597 A2598 G2599 A2600 C2601 A2602 G2603 U2604 FHU2605 C2606 G2607 |
Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |