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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF DENV1-E106 FAB BOUND TO DENV-1 ENVELOPE DIII
Keywords ANTIBODY, FAB, NEUTRALIZING, VIRUS, ENVELOPE, VIRAL PROTEIN, SYSTEM, ANTIBODY EPITOPE, INFECTIOUS DISEASE, CENTER FOR ST GENOMICS OF INFECTIOUS DISEASES (CSGID), NIAID, NATIONAL IN OF ALLERGY AND INFECTIOUS DISEASES
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4L5F     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein    H 218 1655 0
2  Protein   ENVELOPE PROTEIN  E 98 754 0
3  Protein   LIGHT CHAIN OF E106 ANTIBODY (KAPPA)  L 213 1654 0
4 Water     94 0 94
total       623 4063 94

Proteins
Unit 1 GLU1 VAL2 GLN3 LEU4 GLN5 GLN6 SER7 GLY8 PRO9 GLU10 LEU11 VAL12 LYS13 PRO14 GLY15 ALA16 SER17 VAL18 LYS19 ILE20 SER21 CYS22 LYS23 ALA24 SER25 GLY26 TYR27 SER28 PHE29 ILE30 GLY31 TYR32 TYR33 ILE34 HIS35 TRP36 VAL37 LYS38 GLN39 SER40 PRO41 GLU42 LYS43 SER44 LEU45 GLU46 TRP47 ILE48 GLY49 GLU50 ILE51 ASN52 PRO52A ARG53 THR54 GLY55 ASP56 THR57 THR58 TYR59 ASN60 GLN61 LYS62 PHE63 LYS64 ALA65 LYS66 ALA67 THR68 LEU69 THR70 VAL71 ASP72 LYS73 SER74 SER75 SER76 THR77 ALA78 TYR79 MET80 GLN81 LEU82 THR82A SER82B LEU82C THR83 SER84 GLU85 ASP86 SER87 ALA88 VAL89 TYR90 TYR91 CYS92 THR93 LYS94 ARG95 ILE96 ASN97 TRP98 ALA99 LEU100 ASP101 TYR102 TRP103 GLY104 GLN105 GLY106 THR107 THR108 LEU109 THR110 VAL111 SER112 SER113 ALA114 LYS115 THR116 THR117 ALA118 PRO119 SER120 VAL121 TYR122 PRO123 LEU124 ALA125 PRO126 VAL127 CYS128 GLY129 GLY130 THR131 THR132 GLY133 SER134 SER135 VAL136 THR137 LEU138 GLY139 CYS140 LEU141 VAL142 LYS143 GLY144 TYR145 PHE146 PRO147 GLU148 PRO149 VAL150 THR151 LEU152 THR153 TRP154 ASN155 SER156 GLY157 SER158 LEU159 SER160 SER161 GLY162 VAL163 HIS164 THR165 PHE166 PRO167 ALA168 LEU169 LEU170 GLN171 SER172 GLY173 LEU174 TYR175 THR176 LEU177 SER178 SER179 SER180 VAL181 THR182 VAL183 THR184 SER185 ASN186 THR187 TRP188 PRO189 SER190 GLN191 THR192 ILE193 THR194 CYS195 ASN196 VAL197 ALA198 HIS199 PRO200 ALA201 SER202 SER203 THR204 LYS205 VAL206 ASP207 LYS208 LYS209 ILE210 GLU211 SER212 ARG213 ARG214
Unit 2 MET297 SER298 TYR299 VAL300 MET301 CYS302 THR303 GLY304 SER305 PHE306 LYS307 LEU308 GLU309 LYS310 GLU311 VAL312 ALA313 GLU314 THR315 GLN316 HIS317 GLY318 THR319 VAL320 LEU321 VAL322 GLN323 VAL324 LYS325 TYR326 GLU327 GLY328 THR329 ASP330 ALA331 PRO332 CYS333 LYS334 ILE335 PRO336 PHE337 SER338 THR339 GLN340 ASP341 GLU342 LYS343 GLY344 ALA345 THR346 GLN347 ASN348 GLY349 ARG350 LEU351 ILE352 THR353 ALA354 ASN355 PRO356 ILE357 VAL358 THR359 ASP360 LYS361 GLU362 LYS363 PRO364 VAL365 ASN366 ILE367 GLU368 ALA369 GLU370 PRO371 PRO372 PHE373 GLY374 GLU375 SER376 TYR377 ILE378 VAL379 VAL380 GLY381 ALA382 GLY383 GLU384 LYS385 ALA386 LEU387 LYS388 LEU389 SER390 TRP391 PHE392 LYS393 LYS394
Unit 3 GLU1 THR2 THR3 VAL4 THR5 GLN6 SER7 PRO8 ALA9 SER10 LEU11 SER12 VAL13 ALA14 THR15 GLY16 GLU17 LYS18 VAL19 THR20 ILE21 ARG22 CYS23 ILE24 THR25 SER26 THR27 ASP28 ILE29 ASP30 ASP31 ASP32 MET33 ASN34 TRP35 TYR36 GLN37 GLN38 LYS39 PRO40 GLY41 GLU42 ARG43 PRO44 LYS45 LEU46 LEU47 ILE48 SER49 GLU50 GLY51 ASN52 THR53 LEU54 ARG55 PRO56 GLY57 VAL58 PRO59 SER60 ARG61 PHE62 SER63 SER64 SER65 GLY66 TYR67 GLY68 THR69 ASP70 PHE71 VAL72 PHE73 THR74 ILE75 GLU76 ASN77 THR78 LEU79 SER80 GLU81 ASP82 VAL83 ALA84 ASP85 TYR86 PHE87 CYS88 LEU89 GLN90 SER91 ASP92 ASN93 LEU94 PRO95 LEU96 THR97 PHE98 GLY99 SER100 GLY101 THR102 LYS103 LEU104 GLU105 ILE106 LYS107 ARG108 ALA109 ASP110 ALA111 ALA112 PRO113 THR114 VAL115 SER116 ILE117 PHE118 PRO119 PRO120 SER121 SER122 GLU123 GLN124 LEU125 THR126 SER127 GLY128 GLY129 ALA130 SER131 VAL132 VAL133 CYS134 PHE135 LEU136 ASN137 ASN138 PHE139 TYR140 PRO141 LYS142 ASP143 ILE144 ASN145 VAL146 LYS147 TRP148 LYS149 ILE150 ASP151 GLY152 SER153 GLU154 ARG155 GLN156 ASN157 GLY158 VAL159 LEU160 ASN161 SER162 TRP163 THR164 ASP165 GLN166 ASP167 SER168 LYS169 ASP170 SER171 THR172 TYR173 SER174 MET175 SER176 SER177 THR178 LEU179 THR180 LEU181 THR182 LYS183 ASP184 GLU185 TYR186 GLU187 ARG188 HIS189 ASN190 SER191 TYR192 THR193 CYS194 GLU195 ALA196 THR197 HIS198 LYS199 THR200 SER201 THR202 SER203 PRO204 ILE205 VAL206 LYS207 SER208 PHE209 ASN210 ARG211 ASN212 GLU213

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany