4KZE - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF AN RNA APTAMER IN COMPLEX WITH FAB
• Keywords: G-QUADRUPLEX, FLUORESCENCE, FLUOROPHORE BINDING, IMMUNE SYST COMPLEX
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	4KZE	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	BL3-6 FAB ANTIBODY, HEAVY CHAIN	H	225	1678	0
2	Protein	BL3-6 FAB ANTIBODY, LIGHT CHAIN	L	215	1643	0
3	RNA		R	84	1787	32
4	Ligand	RNA (84-MER)	R	2	0	2
5	Water			275	0	275
total				801	5108	309

Proteins

Unit 1

GLU 4 VAL 5 GLN 6 LEU 7 VAL 8 GLU 9 SER 10 GLY 11 GLY 12 GLY 13 LEU 14 VAL 15 GLN 16 PRO 17 GLY 18 GLY 19 SER 20 LEU 21 ARG 22 LEU 23 SER 24 CYS 25 ALA 26 ALA 27 SER 28 GLY 29 PHE 30 TYR 31 ILE 32 SER 33 TYR 34 SER 35 SER 36 ILE 37 HIS 38 TRP 39 VAL 40 ARG 41 GLN 42 ALA 43 PRO 44 GLY 45 LYS 46 GLY 47 LEU 48 GLU 49 TRP 50 VAL 51 ALA 52 SER 53 ILE 54 SER 55 PRO 56 TYR 57 SER 58 GLY 59 SER 60 THR 61 TYR 62 TYR 63 ALA 64 ASP 65 SER 66 VAL 67 LYS 68 GLY 69 ARG 70 PHE 71 THR 72 ILE 73 SER 74 ALA 75 ASP 76 THR 77 SER 78 LYS 79 ASN 80 THR 81 ALA 82 TYR 83 LEU 84 GLN 85 MET 86 ASN 87 SER 88 LEU 89 ARG 90 ALA 91 GLU 92 ASP 93 THR 94 ALA 95 VAL 96 TYR 97 TYR 98 CYS 99 ALA 100 ARG 101 GLN 102 GLY 103 TYR 104 ARG 105 ARG 106 ARG 107 SER 108 GLY 109 ARG 110 GLY 111 PHE 112 ASP 113 TYR 114 TRP 115 GLY 116 GLN 117 GLY 118 THR 119 LEU 120 VAL 121 THR 122 VAL 123 SER 124 SER 125 ALA 126 SER 127 THR 128 LYS 129 GLY 130 PRO 131 SER 132 VAL 133 PHE 134 PRO 135 LEU 136 ALA 137 PRO 138 SER 139 SER 140 LYS 141 SER 142 THR 143 SER 144 GLY 145 GLY 146 THR 147 ALA 148 ALA 149 LEU 150 GLY 151 CYS 152 LEU 153 VAL 154 LYS 155 ASP 156 TYR 157 PHE 158 PRO 159 GLU 160 PRO 161 VAL 162 THR 163 VAL 164 SER 165 TRP 166 ASN 167 SER 168 GLY 169 ALA 170 LEU 171 THR 172 SER 173 GLY 174 VAL 175 HIS 176 THR 177 PHE 178 PRO 179 ALA 180 VAL 181 LEU 182 GLN 183 SER 184 SER 185 GLY 186 LEU 187 TYR 188 SER 189 LEU 190 SER 191 SER 192 VAL 193 VAL 194 THR 195 VAL 196 PRO 197 SER 198 SER 199 SER 200 LEU 201 GLY 202 THR 203 GLN 204 THR 205 TYR 206 ILE 207 CYS 208 ASN 209 VAL 210 ASN 211 HIS 212 LYS 213 PRO 214 SER 215 ASN 216 THR 217 LYS 218 VAL 219 ASP 220 LYS 221 LYS 222 VAL 223 GLU 224 PRO 225 LYS 226 SER 227 CYS 228

Unit 2

SER 1 ASP 2 ILE 3 GLN 4 MET 5 THR 6 GLN 7 SER 8 PRO 9 SER 10 SER 11 LEU 12 SER 13 ALA 14 SER 15 VAL 16 GLY 17 ASP 18 ARG 19 VAL 20 THR 21 ILE 22 THR 23 CYS 24 ARG 25 ALA 26 SER 27 GLN 28 SER 29 VAL 30 SER 31 SER 32 ALA 33 VAL 34 ALA 35 TRP 36 TYR 37 GLN 38 GLN 39 LYS 40 PRO 41 GLY 42 LYS 43 ALA 44 PRO 45 LYS 46 LEU 47 LEU 48 ILE 49 TYR 50 SER 51 ALA 52 SER 53 SER 54 LEU 55 TYR 56 SER 57 GLY 58 VAL 59 PRO 60 SER 61 ARG 62 PHE 63 SER 64 GLY 65 SER 66 ARG 67 SER 68 GLY 69 THR 70 ASP 71 PHE 72 THR 73 LEU 74 THR 75 ILE 76 SER 77 SER 78 LEU 79 GLN 80 PRO 81 GLU 82 ASP 83 PHE 84 ALA 85 THR 86 TYR 87 TYR 88 CYS 89 GLN 90 GLN 91 SER 92 TYR 93 SER 94 PHE 95 PRO 96 SER 97 THR 98 PHE 99 GLY 100 GLN 101 GLY 102 THR 103 LYS 104 VAL 105 GLU 106 ILE 107 LYS 108 ARG 109 THR 110 VAL 111 ALA 112 ALA 113 PRO 114 SER 115 VAL 116 PHE 117 ILE 118 PHE 119 PRO 120 PRO 121 SER 122 ASP 123 GLU 124 GLN 125 LEU 126 LYS 127 SER 128 GLY 129 THR 130 ALA 131 SER 132 VAL 133 VAL 134 CYS 135 LEU 136 LEU 137 ASN 138 ASN 139 PHE 140 TYR 141 PRO 142 ARG 143 GLU 144 ALA 145 LYS 146 VAL 147 GLN 148 TRP 149 LYS 150 VAL 151 ASP 152 ASN 153 ALA 154 LEU 155 GLN 156 SER 157 GLY 158 ASN 159 SER 160 GLN 161 GLU 162 SER 163 VAL 164 THR 165 GLU 166 GLN 167 ASP 168 SER 169 LYS 170 ASP 171 SER 172 THR 173 TYR 174 SER 175 LEU 176 SER 177 SER 178 THR 179 LEU 180 THR 181 LEU 182 SER 183 LYS 184 ALA 185 ASP 186 TYR 187 GLU 188 LYS 189 HIS 190 LYS 191 VAL 192 TYR 193 ALA 194 CYS 195 GLU 196 VAL 197 THR 198 HIS 199 GLN 200 GLY 201 LEU 202 SER 203 SER 204 PRO 205 VAL 206 THR 207 LYS 208 SER 209 PHE 210 ASN 211 ARG 212 GLY 213 GLU 214 CYS 215

Nucleic acids

Unit 3

GTP 1 G 2 A 3 C 4 G 5 C 6 G 7 A 8 C 9 C 10 G 11 A 12 A 13 A 14 U 15 G 16 G 17 U 18 G 19 A 20 A 21 G 22 G 23 A 24 C 25 G 26 G 27 G 28 U 29 C 30 C 31 A 32 G 33 U 34 G 35 C 36 G 37 A 38 A 39 A 40 C 41 A 42 C 43 G 44 C 45 A 46 C 47 U 48 G 49 U 50 U 51 G 52 A 53 G 54 U 55 A 56 G 57 A 58 G 59 U 60 G 61 U 62 G 63 A 64 G 65 C 66 U 67 C 68 C 69 G 70 U 71 A 72 A 73 C 74 U 75 G 76 G 77 U 78 C 79 G 80 C 81 G 82 U 83 C 84

Ligands

Unit 4

K 101 MG 102