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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF RNA 17-MER UUCGGUUUUGAUCCGGA DUPLEX
Keywords RNA DUPLEX, RNA
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4KYY     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 17 356 0
2  RNA    B 17 356 0
3  Ligand   RNA 17-MER  A 5 0 5
4  Ligand   RNA 17-MER  B 2 0 2
5 Water     85 0 85
total       126 712 92

Nucleic acids
Unit 1 U1 U2 C3 G4 G5 U6 U7 U8 U9 G10 A11 U12 C13 C14 G15 G16 A17
Unit 2 U1 U2 C3 G4 G5 U6 U7 U8 U9 G10 A11 U12 C13 C14 G15 G16 A17

Ligands
Unit 3 K101 K102 K103 K104 K105
Unit 4 K101 K102

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany