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Sequence, Chains, Asymmetric and Biological Units

Title ALANINE-GLYOXYLATE AMINOTRANSFERASE VARIANT K390A/K391A IN C WITH THE TPR DOMAIN OF HUMAN PEX5P
Keywords TPR-DOMAIN, AMINOTRANSFERASE, PYRUVATE, TRANSPORT, PEROXISOM IMPORT, PRIMARY HYPEROXALURIA, PEROXISOME, TRANSFERASE-TRAN PROTEIN COMPLEX
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   4KXK     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   SERINE--PYRUVATE AMINOTRANSFERASE  A 387 2977 0
2  Protein   SERINE--PYRUVATE AMINOTRANSFERASE  C 387 2973 0
3  Protein   PEROXISOMAL TARGETING SIGNAL 1 RECEPTOR  B 288 2252 0
4  Protein   PEROXISOMAL TARGETING SIGNAL 1 RECEPTOR  D 288 2256 0
5  Ligand   SERINE--PYRUVATE AMINOTRANSFERASE  A 2 0 9
6  Ligand   SERINE--PYRUVATE AMINOTRANSFERASE  C 1 0 5
7 Water     40 0 40
total       1393 10458 54
Proteins
Unit 1 LEU6 LEU7 VAL8 THR9 PRO10 PRO11 LYS12 ALA13 LEU14 LEU15 LYS16 PRO17 LEU18 SER19 ILE20 PRO21 ASN22 GLN23 LEU24 LEU25 LEU26 GLY27 PRO28 GLY29 PRO30 SER31 ASN32 LEU33 PRO34 PRO35 ARG36 ILE37 MET38 ALA39 ALA40 GLY41 GLY42 LEU43 GLN44 MET45 ILE46 GLY47 SER48 MET49 SER50 LYS51 ASP52 MET53 TYR54 GLN55 ILE56 MET57 ASP58 GLU59 ILE60 LYS61 GLU62 GLY63 ILE64 GLN65 TYR66 VAL67 PHE68 GLN69 THR70 ARG71 ASN72 PRO73 LEU74 THR75 LEU76 VAL77 ILE78 SER79 GLY80 SER81 GLY82 HIS83 CYS84 ALA85 LEU86 GLU87 ALA88 ALA89 LEU90 VAL91 ASN92 VAL93 LEU94 GLU95 PRO96 GLY97 ASP98 SER99 PHE100 LEU101 VAL102 GLY103 ALA104 ASN105 GLY106 ILE107 TRP108 GLY109 GLN110 ARG111 ALA112 VAL113 ASP114 ILE115 GLY116 GLU117 ARG118 ILE119 GLY120 ALA121 ARG122 VAL123 HIS124 PRO125 MET126 THR127 LYS128 ASP129 PRO130 GLY131 GLY132 HIS133 TYR134 THR135 LEU136 GLN137 GLU138 VAL139 GLU140 GLU141 GLY142 LEU143 ALA144 GLN145 HIS146 LYS147 PRO148 VAL149 LEU150 LEU151 PHE152 LEU153 THR154 HIS155 GLY156 GLU157 SER158 SER159 THR160 GLY161 VAL162 LEU163 GLN164 PRO165 LEU166 ASP167 GLY168 PHE169 GLY170 GLU171 LEU172 CYS173 HIS174 ARG175 TYR176 LYS177 CYS178 LEU179 LEU180 LEU181 VAL182 ASP183 SER184 VAL185 ALA186 SER187 LEU188 GLY189 GLY190 THR191 PRO192 LEU193 TYR194 MET195 ASP196 ARG197 GLN198 GLY199 ILE200 ASP201 ILE202 LEU203 TYR204 SER205 GLY206 SER207 GLN208 LYS209 ALA210 LEU211 ASN212 ALA213 PRO214 PRO215 GLY216 THR217 SER218 LEU219 ILE220 SER221 PHE222 SER223 ASP224 LYS225 ALA226 LYS227 LYS228 LYS229 MET230 TYR231 SER232 ARG233 LYS234 THR235 LYS236 PRO237 PHE238 SER239 PHE240 TYR241 LEU242 ASP243 ILE244 LYS245 TRP246 LEU247 ALA248 ASN249 PHE250 TRP251 GLY252 CYS253 ASP254 ASP255 GLN256 PRO257 ARG258 MET259 TYR260 HIS261 HIS262 THR263 ILE264 PRO265 VAL266 ILE267 SER268 LEU269 TYR270 SER271 LEU272 ARG273 GLU274 SER275 LEU276 ALA277 LEU278 ILE279 ALA280 GLU281 GLN282 GLY283 LEU284 GLU285 ASN286 SER287 TRP288 ARG289 GLN290 HIS291 ARG292 GLU293 ALA294 ALA295 ALA296 TYR297 LEU298 HIS299 GLY300 ARG301 LEU302 GLN303 ALA304 LEU305 GLY306 LEU307 GLN308 LEU309 PHE310 VAL311 LYS312 ASP313 PRO314 ALA315 LEU316 ARG317 LEU318 PRO319 THR320 VAL321 THR322 THR323 VAL324 ALA325 VAL326 PRO327 ALA328 GLY329 TYR330 ASP331 TRP332 ARG333 ASP334 ILE335 VAL336 SER337 TYR338 VAL339 ILE340 ASP341 HIS342 PHE343 ASP344 ILE345 GLU346 ILE347 MET348 GLY349 GLY350 LEU351 GLY352 PRO353 SER354 THR355 GLY356 LYS357 VAL358 LEU359 ARG360 ILE361 GLY362 LEU363 LEU364 GLY365 CYS366 ASN367 ALA368 THR369 ARG370 GLU371 ASN372 VAL373 ASP374 ARG375 VAL376 THR377 GLU378 ALA379 LEU380 ARG381 ALA382 ALA383 LEU384 GLN385 HIS386 CYS387 PRO388 LYS389 ALA390 ALA391 LEU392
Unit 2 LEU6 LEU7 VAL8 THR9 PRO10 PRO11 LYS12 ALA13 LEU14 LEU15 LYS16 PRO17 LEU18 SER19 ILE20 PRO21 ASN22 GLN23 LEU24 LEU25 LEU26 GLY27 PRO28 GLY29 PRO30 SER31 ASN32 LEU33 PRO34 PRO35 ARG36 ILE37 MET38 ALA39 ALA40 GLY41 GLY42 LEU43 GLN44 MET45 ILE46 GLY47 SER48 MET49 SER50 LYS51 ASP52 MET53 TYR54 GLN55 ILE56 MET57 ASP58 GLU59 ILE60 LYS61 GLU62 GLY63 ILE64 GLN65 TYR66 VAL67 PHE68 GLN69 THR70 ARG71 ASN72 PRO73 LEU74 THR75 LEU76 VAL77 ILE78 SER79 GLY80 SER81 GLY82 HIS83 CYS84 ALA85 LEU86 GLU87 ALA88 ALA89 LEU90 VAL91 ASN92 VAL93 LEU94 GLU95 PRO96 GLY97 ASP98 SER99 PHE100 LEU101 VAL102 GLY103 ALA104 ASN105 GLY106 ILE107 TRP108 GLY109 GLN110 ARG111 ALA112 VAL113 ASP114 ILE115 GLY116 GLU117 ARG118 ILE119 GLY120 ALA121 ARG122 VAL123 HIS124 PRO125 MET126 THR127 LYS128 ASP129 PRO130 GLY131 GLY132 HIS133 TYR134 THR135 LEU136 GLN137 GLU138 VAL139 GLU140 GLU141 GLY142 LEU143 ALA144 GLN145 HIS146 LYS147 PRO148 VAL149 LEU150 LEU151 PHE152 LEU153 THR154 HIS155 GLY156 GLU157 SER158 SER159 THR160 GLY161 VAL162 LEU163 GLN164 PRO165 LEU166 ASP167 GLY168 PHE169 GLY170 GLU171 LEU172 CYS173 HIS174 ARG175 TYR176 LYS177 CYS178 LEU179 LEU180 LEU181 VAL182 ASP183 SER184 VAL185 ALA186 SER187 LEU188 GLY189 GLY190 THR191 PRO192 LEU193 TYR194 MET195 ASP196 ARG197 GLN198 GLY199 ILE200 ASP201 ILE202 LEU203 TYR204 SER205 GLY206 SER207 GLN208 LYS209 ALA210 LEU211 ASN212 ALA213 PRO214 PRO215 GLY216 THR217 SER218 LEU219 ILE220 SER221 PHE222 SER223 ASP224 LYS225 ALA226 LYS227 LYS228 LYS229 MET230 TYR231 SER232 ARG233 LYS234 THR235 LYS236 PRO237 PHE238 SER239 PHE240 TYR241 LEU242 ASP243 ILE244 LYS245 TRP246 LEU247 ALA248 ASN249 PHE250 TRP251 GLY252 CYS253 ASP254 ASP255 GLN256 PRO257 ARG258 MET259 TYR260 HIS261 HIS262 THR263 ILE264 PRO265 VAL266 ILE267 SER268 LEU269 TYR270 SER271 LEU272 ARG273 GLU274 SER275 LEU276 ALA277 LEU278 ILE279 ALA280 GLU281 GLN282 GLY283 LEU284 GLU285 ASN286 SER287 TRP288 ARG289 GLN290 HIS291 ARG292 GLU293 ALA294 ALA295 ALA296 TYR297 LEU298 HIS299 GLY300 ARG301 LEU302 GLN303 ALA304 LEU305 GLY306 LEU307 GLN308 LEU309 PHE310 VAL311 LYS312 ASP313 PRO314 ALA315 LEU316 ARG317 LEU318 PRO319 THR320 VAL321 THR322 THR323 VAL324 ALA325 VAL326 PRO327 ALA328 GLY329 TYR330 ASP331 TRP332 ARG333 ASP334 ILE335 VAL336 SER337 TYR338 VAL339 ILE340 ASP341 HIS342 PHE343 ASP344 ILE345 GLU346 ILE347 MET348 GLY349 GLY350 LEU351 GLY352 PRO353 SER354 THR355 GLY356 LYS357 VAL358 LEU359 ARG360 ILE361 GLY362 LEU363 LEU364 GLY365 CYS366 ASN367 ALA368 THR369 ARG370 GLU371 ASN372 VAL373 ASP374 ARG375 VAL376 THR377 GLU378 ALA379 LEU380 ARG381 ALA382 ALA383 LEU384 GLN385 HIS386 CYS387 PRO388 LYS389 ALA390 ALA391 LEU392
Unit 3 GLN325 PHE326 GLU327 GLU328 GLU329 ASN330 PRO331 LEU332 ARG333 ASP334 HIS335 PRO336 GLN337 PRO338 PHE339 GLU340 GLU341 GLY342 LEU343 ARG344 ARG345 LEU346 GLN347 GLU348 GLY349 ASP350 LEU351 PRO352 ASN353 ALA354 VAL355 LEU356 LEU357 PHE358 GLU359 ALA360 ALA361 VAL362 GLN363 GLN364 ASP365 PRO366 LYS367 HIS368 MET369 GLU370 ALA371 TRP372 GLN373 TYR374 LEU375 GLY376 THR377 THR378 GLN379 ALA380 GLU381 ASN382 GLU383 GLN384 GLU385 LEU386 LEU387 ALA388 ILE389 SER390 ALA391 LEU392 ARG393 ARG394 CYS395 LEU396 GLU397 LEU398 LYS399 PRO400 ASP401 ASN402 GLN403 THR404 ALA405 LEU406 MET407 ALA408 LEU409 ALA410 VAL411 SER412 PHE413 THR414 ASN415 GLU416 SER417 LEU418 GLN419 ARG420 GLN421 ALA422 CYS423 GLU424 THR425 LEU426 ARG427 ASP428 TRP429 LEU430 ARG431 TYR432 THR433 PRO434 ALA435 TYR436 ALA437 HIS438 LEU439 VAL440 ASP465 SER466 LEU467 PHE468 LEU469 GLU470 VAL471 LYS472 GLU473 LEU474 PHE475 LEU476 ALA477 ALA478 VAL479 ARG480 LEU481 ASP482 PRO483 THR484 SER485 ILE486 ASP487 PRO488 ASP489 VAL490 GLN491 CYS492 GLY493 LEU494 GLY495 VAL496 LEU497 PHE498 ASN499 LEU500 SER501 GLY502 GLU503 TYR504 ASP505 LYS506 ALA507 VAL508 ASP509 CYS510 PHE511 THR512 ALA513 ALA514 LEU515 SER516 VAL517 ARG518 PRO519 ASN520 ASP521 TYR522 LEU523 LEU524 TRP525 ASN526 LYS527 LEU528 GLY529 ALA530 THR531 LEU532 ALA533 ASN534 GLY535 ASN536 GLN537 SER538 GLU539 GLU540 ALA541 VAL542 ALA543 ALA544 TYR545 ARG546 ARG547 ALA548 LEU549 GLU550 LEU551 GLN552 PRO553 GLY554 TYR555 ILE556 ARG557 SER558 ARG559 TYR560 ASN561 LEU562 GLY563 ILE564 SER565 CYS566 ILE567 ASN568 LEU569 GLY570 ALA571 HIS572 ARG573 GLU574 ALA575 VAL576 GLU577 HIS578 PHE579 LEU580 GLU581 ALA582 LEU583 ASN584 MET585 GLN586 ARG587 LYS588 SER589 ARG593 GLY594 GLU595 GLY596 GLY597 ALA598 MET599 SER600 GLU601 ASN602 ILE603 TRP604 SER605 THR606 LEU607 ARG608 LEU609 ALA610 LEU611 SER612 MET613 LEU614 GLY615 GLN616 SER617 ASP618 ALA619 TYR620 GLY621 ALA622 ALA623 ASP624 ALA625 ARG626 ASP627 LEU628 SER629 THR630 LEU631 LEU632 THR633 MET634 PHE635 GLY636 LEU637 PRO638 GLN639
Unit 4 GLN325 PHE326 GLU327 GLU328 GLU329 ASN330 PRO331 LEU332 ARG333 ASP334 HIS335 PRO336 GLN337 PRO338 PHE339 GLU340 GLU341 GLY342 LEU343 ARG344 ARG345 LEU346 GLN347 GLU348 GLY349 ASP350 LEU351 PRO352 ASN353 ALA354 VAL355 LEU356 LEU357 PHE358 GLU359 ALA360 ALA361 VAL362 GLN363 GLN364 ASP365 PRO366 LYS367 HIS368 MET369 GLU370 ALA371 TRP372 GLN373 TYR374 LEU375 GLY376 THR377 THR378 GLN379 ALA380 GLU381 ASN382 GLU383 GLN384 GLU385 LEU386 LEU387 ALA388 ILE389 SER390 ALA391 LEU392 ARG393 ARG394 CYS395 LEU396 GLU397 LEU398 LYS399 PRO400 ASP401 ASN402 GLN403 THR404 ALA405 LEU406 MET407 ALA408 LEU409 ALA410 VAL411 SER412 PHE413 THR414 ASN415 GLU416 SER417 LEU418 GLN419 ARG420 GLN421 ALA422 CYS423 GLU424 THR425 LEU426 ARG427 ASP428 TRP429 LEU430 ARG431 TYR432 THR433 PRO434 ALA435 TYR436 ALA437 HIS438 LEU439 VAL440 ASP465 SER466 LEU467 PHE468 LEU469 GLU470 VAL471 LYS472 GLU473 LEU474 PHE475 LEU476 ALA477 ALA478 VAL479 ARG480 LEU481 ASP482 PRO483 THR484 SER485 ILE486 ASP487 PRO488 ASP489 VAL490 GLN491 CYS492 GLY493 LEU494 GLY495 VAL496 LEU497 PHE498 ASN499 LEU500 SER501 GLY502 GLU503 TYR504 ASP505 LYS506 ALA507 VAL508 ASP509 CYS510 PHE511 THR512 ALA513 ALA514 LEU515 SER516 VAL517 ARG518 PRO519 ASN520 ASP521 TYR522 LEU523 LEU524 TRP525 ASN526 LYS527 LEU528 GLY529 ALA530 THR531 LEU532 ALA533 ASN534 GLY535 ASN536 GLN537 SER538 GLU539 GLU540 ALA541 VAL542 ALA543 ALA544 TYR545 ARG546 ARG547 ALA548 LEU549 GLU550 LEU551 GLN552 PRO553 GLY554 TYR555 ILE556 ARG557 SER558 ARG559 TYR560 ASN561 LEU562 GLY563 ILE564 SER565 CYS566 ILE567 ASN568 LEU569 GLY570 ALA571 HIS572 ARG573 GLU574 ALA575 VAL576 GLU577 HIS578 PHE579 LEU580 GLU581 ALA582 LEU583 ASN584 MET585 GLN586 ARG587 LYS588 SER589 ARG593 GLY594 GLU595 GLY596 GLY597 ALA598 MET599 SER600 GLU601 ASN602 ILE603 TRP604 SER605 THR606 LEU607 ARG608 LEU609 ALA610 LEU611 SER612 MET613 LEU614 GLY615 GLN616 SER617 ASP618 ALA619 TYR620 GLY621 ALA622 ALA623 ASP624 ALA625 ARG626 ASP627 LEU628 SER629 THR630 LEU631 LEU632 THR633 MET634 PHE635 GLY636 LEU637 PRO638 GLN639
Ligands
Unit 5 SO4401 BME402
Unit 6 SO4401
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany