4KRP - Sequence, Chains, Asymmetric and Biological Units

• Title: NANOBODY/VHH DOMAIN 9G8 IN COMPLEX WITH THE EXTRACELLULAR RE EGFR
• Keywords: CELL SURFACE RECEPTOR, GLYCOPROTEIN, NANOBODY, VHH DOMAIN, C DOMAIN, ANTIBODY, ANTIGEN, ANTIBODY COMPLEX, TRANSFERASE-IM SYSTEM COMPLEX
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	4KRP	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	EPIDERMAL GROWTH FACTOR RECEPTOR	A	534	7001	0
2	Protein	NANOBODY/VHH DOMAIN 9G8	B	116	1473	0
3	Protein	CETUXIMAB LIGHT CHAIN	C	211	3099	0
4	Protein	CETUXIMAB HEAVY CHAIN	D	213	3079	0
5	Ligand		E	2	0	55
6	Ligand		F	2	0	55
7	Ligand	EPIDERMAL GROWTH FACTOR RECEPTOR	A	3	0	84
8	Ligand	CETUXIMAB HEAVY CHAIN	D	1	0	28
9	Water			3	0	3
total				1085	14652	225

Proteins

Unit 1	LYS 4 LYS 5 VAL 6 CYS 7 GLN 8 GLY 9 THR 10 SER 11 ASN 12 LYS 13 LEU 14 THR 15 GLN 16 LEU 17 GLY 18 THR 19 PHE 20 GLU 21 ASP 22 HIS 23 PHE 24 LEU 25 SER 26 LEU 27 GLN 28 ARG 29 MET 30 PHE 31 ASN 32 ASN 33 CYS 34 GLU 35 VAL 36 VAL 37 LEU 38 GLY 39 ASN 40 LEU 41 GLU 42 ILE 43 THR 44 TYR 45 VAL 46 GLN 47 ARG 48 ASN 49 TYR 50 ASP 51 LEU 52 SER 53 PHE 54 LEU 55 LYS 56 THR 57 ILE 58 GLN 59 GLU 60 VAL 61 ALA 62 GLY 63 TYR 64 VAL 65 LEU 66 ILE 67 ALA 68 LEU 69 ASN 70 THR 71 VAL 72 GLU 73 ARG 74 ILE 75 PRO 76 LEU 77 GLU 78 ASN 79 LEU 80 GLN 81 ILE 82 ILE 83 ARG 84 GLY 85 ASN 86 MET 87 TYR 88 TYR 89 GLU 90 ASN 91 SER 92 TYR 93 ALA 94 LEU 95 ALA 96 VAL 97 LEU 98 SER 99 ASN 100 TYR 101 ASP 102 ALA 103 ASN 104 LYS 105 THR 106 GLY 107 LEU 108 LYS 109 GLU 110 LEU 111 PRO 112 MET 113 ARG 114 ASN 115 LEU 116 GLN 117 GLU 118 ILE 119 LEU 120 HIS 121 GLY 122 ALA 123 VAL 124 ARG 125 PHE 126 SER 127 ASN 128 ASN 129 PRO 130 ALA 131 LEU 132 CYS 208 HIS 209 ASN 210 GLN 211 CYS 212 ALA 213 ALA 214 GLY 215 CYS 216 THR 217 GLY 218 PRO 219 ARG 220 GLU 221 SER 222 ASP 223 CYS 224 LEU 225 VAL 226 CYS 227 ARG 228 LYS 229 PHE 230 ARG 231 ASP 232 GLU 233 ALA 234 THR 235 CYS 236 LYS 237 ASP 238 THR 239 CYS 240 PRO 241 PRO 242 LEU 243 MET 244 LEU 245 TYR 246 ASN 247 PRO 248 THR 249 THR 250 TYR 251 GLN 252 MET 253 ASP 254 VAL 255 ASN 256 PRO 257 GLU 258 GLY 259 LYS 260 TYR 261 SER 262 PHE 263 GLY 264 ALA 265 THR 266 CYS 267 VAL 268 LYS 269 LYS 270 CYS 271 PRO 272 ARG 273 ASN 274 TYR 275 VAL 276 VAL 277 THR 278 ASP 279 HIS 280 GLY 281 SER 282 CYS 283 VAL 284 ARG 285 ALA 286 CYS 287 GLY 288 ALA 289 ASP 290 SER 291 TYR 292 GLU 293 MET 294 GLU 295 GLU 296 ASP 297 GLY 298 VAL 299 ARG 300 LYS 301 CYS 302 LYS 303 LYS 304 CYS 305 GLU 306 GLY 307 PRO 308 CYS 309 ARG 310 LYS 311 VAL 312 CYS 313 ASN 314 GLY 315 ILE 316 GLY 317 ILE 318 GLY 319 GLU 320 PHE 321 LYS 322 ASP 323 SER 324 LEU 325 SER 326 ILE 327 ASN 328 ALA 329 THR 330 ASN 331 ILE 332 LYS 333 HIS 334 PHE 335 LYS 336 ASN 337 CYS 338 THR 339 SER 340 ILE 341 SER 342 GLY 343 ASP 344 LEU 345 HIS 346 ILE 347 LEU 348 PRO 349 VAL 350 ALA 351 PHE 352 ARG 353 GLY 354 ASP 355 SER 356 PHE 357 THR 358 HIS 359 THR 360 PRO 361 PRO 362 LEU 363 ASP 364 PRO 365 GLN 366 GLU 367 LEU 368 ASP 369 ILE 370 LEU 371 LYS 372 THR 373 VAL 374 LYS 375 GLU 376 ILE 377 THR 378 GLY 379 PHE 380 LEU 381 LEU 382 ILE 383 GLN 384 ALA 385 TRP 386 PRO 387 GLU 388 ASN 389 ARG 390 THR 391 ASP 392 LEU 393 HIS 394 ALA 395 PHE 396 GLU 397 ASN 398 LEU 399 GLU 400 ILE 401 ILE 402 ARG 403 GLY 404 ARG 405 THR 406 LYS 407 GLN 408 HIS 409 GLY 410 GLN 411 PHE 412 SER 413 LEU 414 ALA 415 VAL 416 VAL 417 SER 418 LEU 419 ASN 420 ILE 421 THR 422 SER 423 LEU 424 GLY 425 LEU 426 ARG 427 SER 428 LEU 429 LYS 430 GLU 431 ILE 432 SER 433 ASP 434 GLY 435 ASP 436 VAL 437 ILE 438 ILE 439 SER 440 GLY 441 ASN 442 LYS 443 ASN 444 LEU 445 CYS 446 TYR 447 ALA 448 ASN 449 THR 450 ILE 451 ASN 452 TRP 453 LYS 454 LYS 455 LEU 456 PHE 457 GLY 458 THR 459 SER 460 GLY 461 GLN 462 LYS 463 THR 464 LYS 465 ILE 466 ILE 467 SER 468 ASN 469 ARG 470 GLY 471 GLU 472 ASN 473 SER 474 CYS 475 LYS 476 ALA 477 THR 478 GLY 479 GLN 480 VAL 481 CYS 482 HIS 483 ALA 484 LEU 485 CYS 486 SER 487 PRO 488 GLU 489 GLY 490 CYS 491 TRP 492 GLY 493 PRO 494 GLU 495 PRO 496 ARG 497 ASP 498 CYS 499 VAL 500 SER 501 CYS 502 ARG 503 ASN 504 VAL 505 SER 506 ARG 507 GLY 508 ARG 509 GLU 510 CYS 511 VAL 512 ASP 513 LYS 514 CYS 515 ASN 516 LEU 517 LEU 518 GLU 519 GLY 520 GLU 521 PRO 522 ARG 523 GLU 524 PHE 525 VAL 526 GLU 527 ASN 528 SER 529 GLU 530 CYS 531 ILE 532 GLN 533 CYS 534 HIS 535 PRO 536 GLU 537 CYS 538 LEU 539 PRO 540 GLN 541 ALA 542 MET 543 ASN 544 ILE 545 THR 546 CYS 547 THR 548 GLY 549 ARG 550 GLY 551 PRO 552 ASP 553 ASN 554 CYS 555 ILE 556 GLN 557 CYS 558 ALA 559 HIS 560 TYR 561 ILE 562 ASP 563 GLY 564 PRO 565 HIS 566 CYS 567 VAL 568 LYS 569 THR 570 CYS 571 PRO 572 ALA 573 GLY 574 VAL 575 MET 576 GLY 577 GLU 578 ASN 579 ASN 580 THR 581 LEU 582 VAL 583 TRP 584 LYS 585 TYR 586 ALA 587 ASP 588 ALA 589 GLY 590 HIS 591 VAL 592 CYS 593 HIS 594 LEU 595 CYS 596 HIS 597 PRO 598 ASN 599 CYS 600 THR 601 TYR 602 GLY 603 CYS 604 THR 605 GLY 606 PRO 607 GLY 608 LEU 609 GLU 610 GLY 611 CYS 612
Unit 2	GLU 1 VAL 2 GLN 3 LEU 4 VAL 5 GLU 6 SER 7 GLY 8 GLY 9 GLY 10 LEU 11 LEU 20 SER 21 CYS 22 ALA 23 ALA 24 SER 25 GLY 26 ARG 27 THR 28 PHE 29 SER 30 SER 31 TYR 32 ALA 33 MET 34 GLY 35 TRP 36 PHE 37 ARG 38 GLN 39 ALA 40 PRO 41 GLY 42 LYS 43 GLU 44 ARG 45 GLU 46 PHE 47 VAL 48 VAL 49 ALA 50 ILE 51 ASN 52 TRP 53 SER 54 SER 55 GLY 56 SER 57 THR 58 TYR 59 TYR 60 ALA 61 ASP 62 SER 63 VAL 64 LYS 65 GLY 66 ARG 67 PHE 68 THR 69 ILE 70 SER 71 ARG 72 ASP 73 ASN 74 ALA 75 LYS 76 ASN 77 THR 78 MET 79 TYR 80 LEU 81 GLN 82 MET 83 ASN 84 SER 85 LEU 86 LYS 87 PRO 88 GLU 89 ASP 90 THR 91 ALA 92 VAL 93 TYR 94 TYR 95 CYS 96 ALA 97 ALA 98 GLY 99 TYR 100 GLN 101 ILE 102 ASN 103 SER 104 GLY 105 ASN 106 TYR 107 ASN 108 PHE 109 LYS 110 ASP 111 TYR 112 GLU 113 TYR 114 ASP 115 TYR 116 TRP 117 GLY 118 GLN 119 GLY 120 THR 121 GLN 122 VAL 123 THR 124
Unit 3	ASP 1 ILE 2 LEU 3 LEU 4 THR 5 GLN 6 SER 7 PRO 8 VAL 9 ILE 10 LEU 11 SER 12 VAL 13 SER 14 PRO 15 GLY 16 GLU 17 ARG 18 VAL 19 SER 20 PHE 21 SER 22 CYS 23 ARG 24 ALA 25 SER 26 GLN 27 SER 28 ILE 29 GLY 30 THR 31 ASN 32 ILE 33 HIS 34 TRP 35 TYR 36 GLN 37 GLN 38 ARG 39 THR 40 ASN 41 GLY 42 SER 43 PRO 44 ARG 45 LEU 46 LEU 47 ILE 48 LYS 49 TYR 50 ALA 51 SER 52 GLU 53 SER 54 ILE 55 SER 56 GLY 57 ILE 58 PRO 59 SER 60 ARG 61 PHE 62 SER 63 GLY 64 SER 65 GLY 66 SER 67 GLY 68 THR 69 ASP 70 PHE 71 THR 72 LEU 73 SER 74 ILE 75 ASN 76 SER 77 VAL 78 GLU 79 SER 80 GLU 81 ASP 82 ILE 83 ALA 84 ASP 85 TYR 86 TYR 87 CYS 88 GLN 89 GLN 90 ASN 91 ASN 92 ASN 93 TRP 94 PRO 95 THR 96 THR 97 PHE 98 GLY 99 ALA 100 GLY 101 THR 102 LYS 103 LEU 104 GLU 105 LEU 106 LYS 107 ARG 108 THR 109 VAL 110 ALA 111 ALA 112 PRO 113 SER 114 VAL 115 PHE 116 ILE 117 PHE 118 PRO 119 PRO 120 SER 121 ASP 122 GLU 123 GLN 124 LEU 125 LYS 126 SER 127 GLY 128 THR 129 ALA 130 SER 131 VAL 132 VAL 133 CYS 134 LEU 135 LEU 136 ASN 137 ASN 138 PHE 139 TYR 140 PRO 141 ARG 142 GLU 143 ALA 144 LYS 145 VAL 146 GLN 147 TRP 148 LYS 149 VAL 150 ASP 151 ASN 152 ALA 153 LEU 154 GLN 155 SER 156 GLY 157 ASN 158 SER 159 GLN 160 GLU 161 SER 162 VAL 163 THR 164 GLU 165 GLN 166 ASP 167 SER 168 LYS 169 ASP 170 SER 171 THR 172 TYR 173 SER 174 LEU 175 SER 176 SER 177 THR 178 LEU 179 THR 180 LEU 181 SER 182 LYS 183 ALA 184 ASP 185 TYR 186 GLU 187 LYS 188 HIS 189 LYS 190 VAL 191 TYR 192 ALA 193 CYS 194 GLU 195 VAL 196 THR 197 HIS 198 GLN 199 GLY 200 LEU 201 SER 202 SER 203 PRO 204 VAL 205 THR 206 LYS 207 SER 208 PHE 209 ASN 210 ARG 211
Unit 4	GLN 1 VAL 2 GLN 3 LEU 4 LYS 5 GLN 6 SER 7 GLY 8 PRO 9 GLY 10 LEU 11 VAL 12 GLN 13 PRO 14 SER 15 GLN 16 SER 17 LEU 18 SER 19 ILE 20 THR 21 CYS 22 THR 23 VAL 24 SER 25 GLY 26 PHE 27 SER 28 LEU 29 THR 30 ASN 31 TYR 32 GLY 33 VAL 34 HIS 35 TRP 36 VAL 37 ARG 38 GLN 39 SER 40 PRO 41 GLY 42 LYS 43 GLY 44 LEU 45 GLU 46 TRP 47 LEU 48 GLY 49 VAL 50 ILE 51 TRP 52 SER 53 GLY 54 GLY 55 ASN 56 THR 57 ASP 58 TYR 59 ASN 60 THR 61 PRO 62 PHE 63 THR 64 SER 65 ARG 66 LEU 67 SER 68 ILE 69 ASN 70 LYS 71 ASP 72 ASN 73 SER 74 LYS 75 SER 76 GLN 77 VAL 78 PHE 79 PHE 80 LYS 81 MET 82 ASN 83 SER 84 LEU 85 GLN 86 SER 87 ASN 88 ASP 89 THR 90 ALA 91 ILE 92 TYR 93 TYR 94 CYS 95 ALA 96 ARG 97 ALA 98 LEU 99 THR 100 TYR 101 TYR 102 ASP 103 TYR 104 GLU 105 PHE 106 ALA 107 TYR 108 TRP 109 GLY 110 GLN 111 GLY 112 THR 113 LEU 114 VAL 115 THR 116 VAL 117 SER 118 ALA 119 ALA 120 SER 121 THR 122 LYS 123 GLY 124 PRO 125 SER 126 VAL 127 PHE 128 PRO 129 LEU 130 ALA 131 PRO 132 SER 133 SER 134 LYS 135 THR 141 ALA 142 ALA 143 LEU 144 GLY 145 CYS 146 LEU 147 VAL 148 LYS 149 ASP 150 TYR 151 PHE 152 PRO 153 GLU 154 PRO 155 VAL 156 THR 157 VAL 158 SER 159 TRP 160 ASN 161 SER 162 GLY 163 ALA 164 LEU 165 THR 166 SER 167 GLY 168 VAL 169 HIS 170 THR 171 PHE 172 PRO 173 ALA 174 VAL 175 LEU 176 GLN 177 SER 178 SER 179 GLY 180 LEU 181 TYR 182 SER 183 LEU 184 SER 185 SER 186 VAL 187 VAL 188 THR 189 VAL 190 PRO 191 SER 192 SER 193 SER 194 LEU 195 GLY 196 THR 197 GLN 198 THR 199 TYR 200 ILE 201 CYS 202 ASN 203 VAL 204 ASN 205 HIS 206 LYS 207 PRO 208 SER 209 ASN 210 THR 211 LYS 212 VAL 213 ASP 214 LYS 215 ARG 216 VAL 217 GLU 218

Ligands

Unit 5	NAG 1 NAG 2
Unit 6	NAG 1 NAG 2
Unit 7	NAG 703 NAG 704 NAG 707
Unit 8	NAG 301