4KJY - Sequence, Chains, Asymmetric and Biological Units

• Title: COMPLEX OF HIGH-AFFINITY SIRP ALPHA VARIANT FD6 WITH CD47
• Keywords: IMMUNOGLOBULIN FOLD, IMMUNE REGULATION, N-LINKED GLYCOSYLATI PLASMA MEMBRANE, IMMUNE SYSTEM
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	4KJY	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	LEUKOCYTE SURFACE ANTIGEN CD47	A	114	846	8
2	Protein	HIGH-AFFINITY SIRPA VARIANT FD6	B	114	876	0
3	Protein	LEUKOCYTE SURFACE ANTIGEN CD47	C	114	871	8
4	Protein	HIGH-AFFINITY SIRPA VARIANT FD6	D	116	892	0
5	Ligand	LEUKOCYTE SURFACE ANTIGEN CD47	A	4	0	47
6	Ligand	LEUKOCYTE SURFACE ANTIGEN CD47	C	6	0	75
7	Ligand	HIGH-AFFINITY SIRPA VARIANT FD6	D	1	0	5
8	Water			378	0	378
total				847	3485	521

Proteins

Unit 1	PCA 1 LEU 2 LEU 3 PHE 4 ASN 5 LYS 6 THR 7 LYS 8 SER 9 VAL 10 GLU 11 PHE 12 THR 13 PHE 14 GLY 15 ASN 16 ASP 17 THR 18 VAL 19 VAL 20 ILE 21 PRO 22 CYS 23 PHE 24 VAL 25 THR 26 ASN 27 MET 28 GLU 29 ALA 30 GLN 31 ASN 32 THR 33 THR 34 GLU 35 VAL 36 TYR 37 VAL 38 LYS 39 TRP 40 LYS 41 PHE 42 LYS 43 GLY 44 ARG 45 ASP 46 ILE 47 TYR 48 THR 49 PHE 50 ASP 51 GLY 52 ALA 53 LEU 54 ASN 55 LYS 56 SER 57 THR 58 VAL 59 PRO 60 THR 61 ASP 62 PHE 63 SER 64 SER 65 ALA 66 LYS 67 ILE 68 GLU 69 VAL 70 SER 71 GLN 72 LEU 73 LEU 74 LYS 75 GLY 76 ASP 77 ALA 78 SER 79 LEU 80 LYS 81 MET 82 ASP 83 LYS 84 SER 85 ASP 86 ALA 87 VAL 88 SER 89 HIS 90 THR 91 GLY 92 ASN 93 TYR 94 THR 95 CYS 96 GLU 97 VAL 98 THR 99 GLU 100 LEU 101 THR 102 ARG 103 GLU 104 GLY 105 GLU 106 THR 107 ILE 108 ILE 109 GLU 110 LEU 111 LYS 112 TYR 113 ARG 114
Unit 2	GLU 1 GLU 2 GLU 3 VAL 4 GLN 5 ILE 6 ILE 7 GLN 8 PRO 9 ASP 10 LYS 11 SER 12 VAL 13 SER 14 VAL 15 ALA 16 ALA 17 GLY 18 GLU 19 SER 20 ALA 21 ILE 22 LEU 23 HIS 24 CYS 25 THR 26 ILE 27 THR 28 SER 29 LEU 30 PHE 31 PRO 32 VAL 33 GLY 34 PRO 35 ILE 36 GLN 37 TRP 38 PHE 39 ARG 40 GLY 41 ALA 42 GLY 43 PRO 44 ALA 45 ARG 46 VAL 47 LEU 48 ILE 49 TYR 50 ASN 51 GLN 52 ARG 53 GLN 54 GLY 55 PRO 56 PHE 57 PRO 58 ARG 59 VAL 60 THR 61 THR 62 ILE 63 SER 64 GLU 65 THR 66 THR 67 ARG 68 ARG 69 GLU 70 ASN 71 MET 72 ASP 73 PHE 74 SER 75 ILE 76 SER 77 ILE 78 SER 79 ASN 80 ILE 81 THR 82 PRO 83 ALA 84 ASP 85 ALA 86 GLY 87 THR 88 TYR 89 TYR 90 CYS 91 ILE 92 LYS 93 PHE 94 ARG 95 LYS 96 GLY 97 SER 98 PRO 99 ASP 100 THR 101 GLU 102 PHE 103 LYS 104 SER 105 GLY 106 ALA 107 GLY 108 THR 109 GLU 110 LEU 111 SER 112 VAL 113 ARG 114
Unit 3	PCA 1 LEU 2 LEU 3 PHE 4 ASN 5 LYS 6 THR 7 LYS 8 SER 9 VAL 10 GLU 11 PHE 12 THR 13 PHE 14 GLY 15 ASN 16 ASP 17 THR 18 VAL 19 VAL 20 ILE 21 PRO 22 CYS 23 PHE 24 VAL 25 THR 26 ASN 27 MET 28 GLU 29 ALA 30 GLN 31 ASN 32 THR 33 THR 34 GLU 35 VAL 36 TYR 37 VAL 38 LYS 39 TRP 40 LYS 41 PHE 42 LYS 43 GLY 44 ARG 45 ASP 46 ILE 47 TYR 48 THR 49 PHE 50 ASP 51 GLY 52 ALA 53 LEU 54 ASN 55 LYS 56 SER 57 THR 58 VAL 59 PRO 60 THR 61 ASP 62 PHE 63 SER 64 SER 65 ALA 66 LYS 67 ILE 68 GLU 69 VAL 70 SER 71 GLN 72 LEU 73 LEU 74 LYS 75 GLY 76 ASP 77 ALA 78 SER 79 LEU 80 LYS 81 MET 82 ASP 83 LYS 84 SER 85 ASP 86 ALA 87 VAL 88 SER 89 HIS 90 THR 91 GLY 92 ASN 93 TYR 94 THR 95 CYS 96 GLU 97 VAL 98 THR 99 GLU 100 LEU 101 THR 102 ARG 103 GLU 104 GLY 105 GLU 106 THR 107 ILE 108 ILE 109 GLU 110 LEU 111 LYS 112 TYR 113 ARG 114
Unit 4	GLU 2 GLU 3 VAL 4 GLN 5 ILE 6 ILE 7 GLN 8 PRO 9 ASP 10 LYS 11 SER 12 VAL 13 SER 14 VAL 15 ALA 16 ALA 17 GLY 18 GLU 19 SER 20 ALA 21 ILE 22 LEU 23 HIS 24 CYS 25 THR 26 ILE 27 THR 28 SER 29 LEU 30 PHE 31 PRO 32 VAL 33 GLY 34 PRO 35 ILE 36 GLN 37 TRP 38 PHE 39 ARG 40 GLY 41 ALA 42 GLY 43 PRO 44 ALA 45 ARG 46 VAL 47 LEU 48 ILE 49 TYR 50 ASN 51 GLN 52 ARG 53 GLN 54 GLY 55 PRO 56 PHE 57 PRO 58 ARG 59 VAL 60 THR 61 THR 62 ILE 63 SER 64 GLU 65 THR 66 THR 67 ARG 68 ARG 69 GLU 70 ASN 71 MET 72 ASP 73 PHE 74 SER 75 ILE 76 SER 77 ILE 78 SER 79 ASN 80 ILE 81 THR 82 PRO 83 ALA 84 ASP 85 ALA 86 GLY 87 THR 88 TYR 89 TYR 90 CYS 91 ILE 92 LYS 93 PHE 94 ARG 95 LYS 96 GLY 97 SER 98 PRO 99 ASP 100 THR 101 GLU 102 PHE 103 LYS 104 SER 105 GLY 106 ALA 107 GLY 108 THR 109 GLU 110 LEU 111 SER 112 VAL 113 ARG 114 ALA 115 LYS 116 PRO 117

Ligands

Unit 5	SO4 201 NAG 202 NAG 203 NAG 204
Unit 6	NAG 201 NAG 202 NAG 203 NAG 204 NAG 205 SO4 206
Unit 7	SO4 201