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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTALLOGRAPHIC ANALYSIS OF AN RNA-POLYMERASE SIGMA-SUBUNIT COMPLEXED WITH -10 PROMOTER ELEMENT SSDNA
Keywords SSDNA, G-QUARTET, G-QUADRUPLEX, PROMOTER RECOGNITION, PROMOT OPENING, TRANSCRIPTION INITIATION, PROTEIN-DNA BINDING, SSD BINDING, TRANSCRIPTION-DNA COMPLEX
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   4KI2     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Other macromolecule   DNA (5'-D(*TP*GP*TP*AP*CP*AP*AP*TP*GP*GP*G)-3')  D 11 227 0
2  Other macromolecule   DNA (5'-D(*TP*GP*TP*AP*CP*AP*AP*TP*GP*GP*G)-3')  E 10 210 0
3  Other macromolecule   DNA (5'-D(*TP*GP*TP*AP*CP*AP*AP*TP*GP*GP*G)-3')  F 3 66 0
4  Other macromolecule   DNA (5'-D(*TP*GP*TP*AP*CP*AP*AP*TP*GP*GP*G)-3')  G 3 66 0
5  Protein   RNA POLYMERASE SIGMA FACTOR  A 178 1364 0
6  Protein   RNA POLYMERASE SIGMA FACTOR  B 234 1788 0
7  Ligand   DNA (5'-D(*TP*GP*TP*AP*CP*AP*AP*TP*GP*GP*G)-3')  D 3 0 3
8  Ligand   DNA (5'-D(*TP*GP*TP*AP*CP*AP*AP*TP*GP*GP*G)-3')  G 2 0 2
total       444 3721 5
Proteins
Unit 5 SER93 ASP94 PRO95 VAL96 ARG97 GLN98 TYR99 LEU100 HIS101 GLU102 ILE103 GLY104 GLN105 VAL106 PRO107 LEU108 LEU109 THR110 LEU111 GLU112 GLU113 GLU114 ILE115 ASP116 LEU117 ALA118 ARG119 LYS120 VAL121 GLU122 GLU123 GLY124 MET125 GLU126 ALA127 ILE128 LYS129 LYS130 LEU131 SER132 GLU133 ALA134 THR135 GLY136 LEU137 ASP138 GLN139 GLU140 LEU141 ILE142 ARG143 GLU144 VAL145 VAL146 ARG147 ALA148 LYS149 ILE150 LEU151 GLY152 THR153 ALA154 ARG155 ILE156 GLN157 LYS158 ILE159 PRO160 GLY161 LEU162 LYS163 GLU164 LYS165 PRO166 ASP167 PRO168 LYS169 THR170 VAL171 GLU172 GLU173 VAL174 ASP175 GLY176 LYS177 LEU178 LYS179 SER180 LEU181 PRO182 LYS183 GLU184 LEU185 LYS186 ARG187 TYR188 LEU189 HIS190 ILE191 ALA192 ARG193 GLU194 GLY195 GLU196 ALA197 ALA198 ARG199 GLN200 HIS201 LEU202 ILE203 GLU204 ALA205 ASN206 LEU207 ARG208 LEU209 VAL210 VAL211 SER212 ILE213 ALA214 LYS215 LYS216 TYR217 THR218 GLY219 ARG220 GLY221 LEU222 SER223 PHE224 LEU225 ASP226 LEU227 ILE228 GLN229 GLU230 GLY231 ASN232 GLN233 GLY234 LEU235 ILE236 ARG237 ALA238 VAL239 GLU240 LYS241 PHE242 GLU243 TYR244 LYS245 ARG246 ARG247 PHE248 LYS249 PHE250 SER251 THR252 TYR253 ALA254 THR255 TRP256 TRP257 ILE258 ARG259 GLN260 ALA261 ILE262 ASN263 ARG264 ALA265 ILE266 ALA267 ASP268 GLN269 ALA270
Unit 6 SER93 ASP94 PRO95 VAL96 ARG97 GLN98 TYR99 LEU100 HIS101 GLU102 ILE103 GLY104 GLN105 VAL106 PRO107 LEU108 LEU109 THR110 LEU111 GLU112 GLU113 GLU114 ILE115 ASP116 LEU117 ALA118 ARG119 LYS120 VAL121 GLU122 GLU123 GLY124 MET125 GLU126 ALA127 ILE128 LYS129 LYS130 LEU131 SER132 GLU133 ALA134 THR135 GLY136 LEU137 ASP138 GLN139 GLU140 LEU141 ILE142 ARG143 GLU144 VAL145 VAL146 ARG147 ALA148 LYS149 ILE150 LEU151 GLY152 THR153 ALA154 ARG155 ILE156 GLN157 LYS158 ILE159 PRO160 GLY161 LEU162 LYS163 GLU164 LYS165 PRO166 ASP167 PRO168 LYS169 THR170 VAL171 GLU172 GLU173 VAL174 ASP175 GLY176 LYS177 LEU178 LYS179 SER180 LEU181 PRO182 LYS183 GLU184 LEU185 LYS186 ARG187 TYR188 LEU189 HIS190 ILE191 ALA192 ARG193 GLU194 GLY195 GLU196 ALA197 ALA198 ARG199 GLN200 HIS201 LEU202 ILE203 GLU204 ALA205 ASN206 LEU207 ARG208 LEU209 VAL210 VAL211 SER212 ILE213 ALA214 LYS215 LYS216 TYR217 THR218 GLY219 ARG220 GLY221 LEU222 SER223 PHE224 LEU225 ASP226 LEU227 ILE228 GLN229 GLU230 GLY231 ASN232 GLN233 GLY234 LEU235 ILE236 ARG237 ALA238 VAL239 GLU240 LYS241 PHE242 GLU243 TYR244 LYS245 ARG246 ARG247 PHE248 LYS249 PHE250 SER251 THR252 TYR253 ALA254 THR255 TRP256 TRP257 ILE258 ARG259 GLN260 ALA261 ILE262 ASN263 ARG264 ALA265 ILE266 ALA267 ASP268 GLN269 ALA270 ARG271 THR272 ILE273 ARG274 ILE275 PRO276 VAL277 HIS278 MET279 VAL280 GLU281 THR282 ILE283 ASN284 LYS285 LEU286 SER287 ARG288 THR289 ALA290 ARG291 GLN292 LEU293 GLN294 GLN295 GLU296 LEU297 GLY298 ARG299 GLU300 PRO301 SER302 TYR303 GLU304 GLU305 ILE306 ALA307 GLU308 ALA309 MET310 GLY311 PRO312 GLY313 TRP314 ASP315 ALA316 LYS317 ARG318 VAL319 GLU320 GLU321 THR322 LEU323 LYS324 ILE325 ALA326
Other macromolecules
Unit 1 DT1 DG2 DT3 DA4 DC5 DA6 DA7 DT8 DG9 DG10 DG11
Unit 2 DG2 DT3 DA4 DC5 DA6 DA7 DT8 DG9 DG10 DG11
Unit 3 DG9 DG10 DG11
Unit 4 DG9 DG10 DG11
Ligands
Unit 7 K101 K102 K103
Unit 8 K101 K102
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany