4K4B - Sequence, Chains, Asymmetric and Biological Units

• Title: X-RAY CRYSTAL STRUCTURE OF E. COLI YDII COMPLEXED WITH UNDEC COA
• Keywords: HOTDOG FOLD, THIOESTERASE, HYDROLASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	4K4B	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	ESTERASE YDII	A	136	1046	0
2	Protein	ESTERASE YDII	B	136	1046	0
3	Protein	ESTERASE YDII	C	136	1046	0
4	Protein	ESTERASE YDII	D	136	1046	0
5	Protein	ESTERASE YDII	E	136	1046	0
6	Protein	ESTERASE YDII	F	136	1046	0
7	Protein	ESTERASE YDII	G	136	1046	0
8	Protein	ESTERASE YDII	H	136	1046	0
9	Ligand	ESTERASE YDII	A	3	0	121
10	Ligand	ESTERASE YDII	B	2	0	120
11	Ligand	ESTERASE YDII	C	1	0	60
12	Ligand	ESTERASE YDII	D	1	0	60
13	Ligand	ESTERASE YDII	E	4	0	181
14	Ligand	ESTERASE YDII	F	1	0	60
15	Ligand	ESTERASE YDII	H	3	0	180
16	Water			875	0	875
total				1978	8368	1657

Proteins

Unit 1	MET 1 ILE 2 TRP 3 LYS 4 ARG 5 LYS 6 ILE 7 THR 8 LEU 9 GLU 10 ALA 11 LEU 12 ASN 13 ALA 14 MET 15 GLY 16 GLU 17 GLY 18 ASN 19 MET 20 VAL 21 GLY 22 PHE 23 LEU 24 ASP 25 ILE 26 ARG 27 PHE 28 GLU 29 HIS 30 ILE 31 GLY 32 ASP 33 ASP 34 THR 35 LEU 36 GLU 37 ALA 38 THR 39 MET 40 PRO 41 VAL 42 ASP 43 SER 44 ARG 45 THR 46 LYS 47 GLN 48 PRO 49 PHE 50 GLY 51 LEU 52 LEU 53 HIS 54 GLY 55 GLY 56 ALA 57 SER 58 VAL 59 VAL 60 LEU 61 ALA 62 GLU 63 SER 64 ILE 65 GLY 66 SER 67 VAL 68 ALA 69 GLY 70 TYR 71 LEU 72 CYS 73 THR 74 GLU 75 GLY 76 GLU 77 GLN 78 LYS 79 VAL 80 VAL 81 GLY 82 LEU 83 GLU 84 ILE 85 ASN 86 ALA 87 ASN 88 HIS 89 VAL 90 ARG 91 SER 92 ALA 93 ARG 94 GLU 95 GLY 96 ARG 97 VAL 98 ARG 99 GLY 100 VAL 101 CYS 102 LYS 103 PRO 104 LEU 105 HIS 106 LEU 107 GLY 108 SER 109 ARG 110 HIS 111 GLN 112 VAL 113 TRP 114 GLN 115 ILE 116 GLU 117 ILE 118 PHE 119 ASP 120 GLU 121 LYS 122 GLY 123 ARG 124 LEU 125 CYS 126 CYS 127 SER 128 SER 129 ARG 130 LEU 131 THR 132 THR 133 ALA 134 ILE 135 LEU 136
Unit 2	MET 1 ILE 2 TRP 3 LYS 4 ARG 5 LYS 6 ILE 7 THR 8 LEU 9 GLU 10 ALA 11 LEU 12 ASN 13 ALA 14 MET 15 GLY 16 GLU 17 GLY 18 ASN 19 MET 20 VAL 21 GLY 22 PHE 23 LEU 24 ASP 25 ILE 26 ARG 27 PHE 28 GLU 29 HIS 30 ILE 31 GLY 32 ASP 33 ASP 34 THR 35 LEU 36 GLU 37 ALA 38 THR 39 MET 40 PRO 41 VAL 42 ASP 43 SER 44 ARG 45 THR 46 LYS 47 GLN 48 PRO 49 PHE 50 GLY 51 LEU 52 LEU 53 HIS 54 GLY 55 GLY 56 ALA 57 SER 58 VAL 59 VAL 60 LEU 61 ALA 62 GLU 63 SER 64 ILE 65 GLY 66 SER 67 VAL 68 ALA 69 GLY 70 TYR 71 LEU 72 CYS 73 THR 74 GLU 75 GLY 76 GLU 77 GLN 78 LYS 79 VAL 80 VAL 81 GLY 82 LEU 83 GLU 84 ILE 85 ASN 86 ALA 87 ASN 88 HIS 89 VAL 90 ARG 91 SER 92 ALA 93 ARG 94 GLU 95 GLY 96 ARG 97 VAL 98 ARG 99 GLY 100 VAL 101 CYS 102 LYS 103 PRO 104 LEU 105 HIS 106 LEU 107 GLY 108 SER 109 ARG 110 HIS 111 GLN 112 VAL 113 TRP 114 GLN 115 ILE 116 GLU 117 ILE 118 PHE 119 ASP 120 GLU 121 LYS 122 GLY 123 ARG 124 LEU 125 CYS 126 CYS 127 SER 128 SER 129 ARG 130 LEU 131 THR 132 THR 133 ALA 134 ILE 135 LEU 136
Unit 3	MET 1 ILE 2 TRP 3 LYS 4 ARG 5 LYS 6 ILE 7 THR 8 LEU 9 GLU 10 ALA 11 LEU 12 ASN 13 ALA 14 MET 15 GLY 16 GLU 17 GLY 18 ASN 19 MET 20 VAL 21 GLY 22 PHE 23 LEU 24 ASP 25 ILE 26 ARG 27 PHE 28 GLU 29 HIS 30 ILE 31 GLY 32 ASP 33 ASP 34 THR 35 LEU 36 GLU 37 ALA 38 THR 39 MET 40 PRO 41 VAL 42 ASP 43 SER 44 ARG 45 THR 46 LYS 47 GLN 48 PRO 49 PHE 50 GLY 51 LEU 52 LEU 53 HIS 54 GLY 55 GLY 56 ALA 57 SER 58 VAL 59 VAL 60 LEU 61 ALA 62 GLU 63 SER 64 ILE 65 GLY 66 SER 67 VAL 68 ALA 69 GLY 70 TYR 71 LEU 72 CYS 73 THR 74 GLU 75 GLY 76 GLU 77 GLN 78 LYS 79 VAL 80 VAL 81 GLY 82 LEU 83 GLU 84 ILE 85 ASN 86 ALA 87 ASN 88 HIS 89 VAL 90 ARG 91 SER 92 ALA 93 ARG 94 GLU 95 GLY 96 ARG 97 VAL 98 ARG 99 GLY 100 VAL 101 CYS 102 LYS 103 PRO 104 LEU 105 HIS 106 LEU 107 GLY 108 SER 109 ARG 110 HIS 111 GLN 112 VAL 113 TRP 114 GLN 115 ILE 116 GLU 117 ILE 118 PHE 119 ASP 120 GLU 121 LYS 122 GLY 123 ARG 124 LEU 125 CYS 126 CYS 127 SER 128 SER 129 ARG 130 LEU 131 THR 132 THR 133 ALA 134 ILE 135 LEU 136
Unit 4	MET 1 ILE 2 TRP 3 LYS 4 ARG 5 LYS 6 ILE 7 THR 8 LEU 9 GLU 10 ALA 11 LEU 12 ASN 13 ALA 14 MET 15 GLY 16 GLU 17 GLY 18 ASN 19 MET 20 VAL 21 GLY 22 PHE 23 LEU 24 ASP 25 ILE 26 ARG 27 PHE 28 GLU 29 HIS 30 ILE 31 GLY 32 ASP 33 ASP 34 THR 35 LEU 36 GLU 37 ALA 38 THR 39 MET 40 PRO 41 VAL 42 ASP 43 SER 44 ARG 45 THR 46 LYS 47 GLN 48 PRO 49 PHE 50 GLY 51 LEU 52 LEU 53 HIS 54 GLY 55 GLY 56 ALA 57 SER 58 VAL 59 VAL 60 LEU 61 ALA 62 GLU 63 SER 64 ILE 65 GLY 66 SER 67 VAL 68 ALA 69 GLY 70 TYR 71 LEU 72 CYS 73 THR 74 GLU 75 GLY 76 GLU 77 GLN 78 LYS 79 VAL 80 VAL 81 GLY 82 LEU 83 GLU 84 ILE 85 ASN 86 ALA 87 ASN 88 HIS 89 VAL 90 ARG 91 SER 92 ALA 93 ARG 94 GLU 95 GLY 96 ARG 97 VAL 98 ARG 99 GLY 100 VAL 101 CYS 102 LYS 103 PRO 104 LEU 105 HIS 106 LEU 107 GLY 108 SER 109 ARG 110 HIS 111 GLN 112 VAL 113 TRP 114 GLN 115 ILE 116 GLU 117 ILE 118 PHE 119 ASP 120 GLU 121 LYS 122 GLY 123 ARG 124 LEU 125 CYS 126 CYS 127 SER 128 SER 129 ARG 130 LEU 131 THR 132 THR 133 ALA 134 ILE 135 LEU 136
Unit 5	MET 1 ILE 2 TRP 3 LYS 4 ARG 5 LYS 6 ILE 7 THR 8 LEU 9 GLU 10 ALA 11 LEU 12 ASN 13 ALA 14 MET 15 GLY 16 GLU 17 GLY 18 ASN 19 MET 20 VAL 21 GLY 22 PHE 23 LEU 24 ASP 25 ILE 26 ARG 27 PHE 28 GLU 29 HIS 30 ILE 31 GLY 32 ASP 33 ASP 34 THR 35 LEU 36 GLU 37 ALA 38 THR 39 MET 40 PRO 41 VAL 42 ASP 43 SER 44 ARG 45 THR 46 LYS 47 GLN 48 PRO 49 PHE 50 GLY 51 LEU 52 LEU 53 HIS 54 GLY 55 GLY 56 ALA 57 SER 58 VAL 59 VAL 60 LEU 61 ALA 62 GLU 63 SER 64 ILE 65 GLY 66 SER 67 VAL 68 ALA 69 GLY 70 TYR 71 LEU 72 CYS 73 THR 74 GLU 75 GLY 76 GLU 77 GLN 78 LYS 79 VAL 80 VAL 81 GLY 82 LEU 83 GLU 84 ILE 85 ASN 86 ALA 87 ASN 88 HIS 89 VAL 90 ARG 91 SER 92 ALA 93 ARG 94 GLU 95 GLY 96 ARG 97 VAL 98 ARG 99 GLY 100 VAL 101 CYS 102 LYS 103 PRO 104 LEU 105 HIS 106 LEU 107 GLY 108 SER 109 ARG 110 HIS 111 GLN 112 VAL 113 TRP 114 GLN 115 ILE 116 GLU 117 ILE 118 PHE 119 ASP 120 GLU 121 LYS 122 GLY 123 ARG 124 LEU 125 CYS 126 CYS 127 SER 128 SER 129 ARG 130 LEU 131 THR 132 THR 133 ALA 134 ILE 135 LEU 136
Unit 6	MET 1 ILE 2 TRP 3 LYS 4 ARG 5 LYS 6 ILE 7 THR 8 LEU 9 GLU 10 ALA 11 LEU 12 ASN 13 ALA 14 MET 15 GLY 16 GLU 17 GLY 18 ASN 19 MET 20 VAL 21 GLY 22 PHE 23 LEU 24 ASP 25 ILE 26 ARG 27 PHE 28 GLU 29 HIS 30 ILE 31 GLY 32 ASP 33 ASP 34 THR 35 LEU 36 GLU 37 ALA 38 THR 39 MET 40 PRO 41 VAL 42 ASP 43 SER 44 ARG 45 THR 46 LYS 47 GLN 48 PRO 49 PHE 50 GLY 51 LEU 52 LEU 53 HIS 54 GLY 55 GLY 56 ALA 57 SER 58 VAL 59 VAL 60 LEU 61 ALA 62 GLU 63 SER 64 ILE 65 GLY 66 SER 67 VAL 68 ALA 69 GLY 70 TYR 71 LEU 72 CYS 73 THR 74 GLU 75 GLY 76 GLU 77 GLN 78 LYS 79 VAL 80 VAL 81 GLY 82 LEU 83 GLU 84 ILE 85 ASN 86 ALA 87 ASN 88 HIS 89 VAL 90 ARG 91 SER 92 ALA 93 ARG 94 GLU 95 GLY 96 ARG 97 VAL 98 ARG 99 GLY 100 VAL 101 CYS 102 LYS 103 PRO 104 LEU 105 HIS 106 LEU 107 GLY 108 SER 109 ARG 110 HIS 111 GLN 112 VAL 113 TRP 114 GLN 115 ILE 116 GLU 117 ILE 118 PHE 119 ASP 120 GLU 121 LYS 122 GLY 123 ARG 124 LEU 125 CYS 126 CYS 127 SER 128 SER 129 ARG 130 LEU 131 THR 132 THR 133 ALA 134 ILE 135 LEU 136
Unit 7	MET 1 ILE 2 TRP 3 LYS 4 ARG 5 LYS 6 ILE 7 THR 8 LEU 9 GLU 10 ALA 11 LEU 12 ASN 13 ALA 14 MET 15 GLY 16 GLU 17 GLY 18 ASN 19 MET 20 VAL 21 GLY 22 PHE 23 LEU 24 ASP 25 ILE 26 ARG 27 PHE 28 GLU 29 HIS 30 ILE 31 GLY 32 ASP 33 ASP 34 THR 35 LEU 36 GLU 37 ALA 38 THR 39 MET 40 PRO 41 VAL 42 ASP 43 SER 44 ARG 45 THR 46 LYS 47 GLN 48 PRO 49 PHE 50 GLY 51 LEU 52 LEU 53 HIS 54 GLY 55 GLY 56 ALA 57 SER 58 VAL 59 VAL 60 LEU 61 ALA 62 GLU 63 SER 64 ILE 65 GLY 66 SER 67 VAL 68 ALA 69 GLY 70 TYR 71 LEU 72 CYS 73 THR 74 GLU 75 GLY 76 GLU 77 GLN 78 LYS 79 VAL 80 VAL 81 GLY 82 LEU 83 GLU 84 ILE 85 ASN 86 ALA 87 ASN 88 HIS 89 VAL 90 ARG 91 SER 92 ALA 93 ARG 94 GLU 95 GLY 96 ARG 97 VAL 98 ARG 99 GLY 100 VAL 101 CYS 102 LYS 103 PRO 104 LEU 105 HIS 106 LEU 107 GLY 108 SER 109 ARG 110 HIS 111 GLN 112 VAL 113 TRP 114 GLN 115 ILE 116 GLU 117 ILE 118 PHE 119 ASP 120 GLU 121 LYS 122 GLY 123 ARG 124 LEU 125 CYS 126 CYS 127 SER 128 SER 129 ARG 130 LEU 131 THR 132 THR 133 ALA 134 ILE 135 LEU 136
Unit 8	MET 1 ILE 2 TRP 3 LYS 4 ARG 5 LYS 6 ILE 7 THR 8 LEU 9 GLU 10 ALA 11 LEU 12 ASN 13 ALA 14 MET 15 GLY 16 GLU 17 GLY 18 ASN 19 MET 20 VAL 21 GLY 22 PHE 23 LEU 24 ASP 25 ILE 26 ARG 27 PHE 28 GLU 29 HIS 30 ILE 31 GLY 32 ASP 33 ASP 34 THR 35 LEU 36 GLU 37 ALA 38 THR 39 MET 40 PRO 41 VAL 42 ASP 43 SER 44 ARG 45 THR 46 LYS 47 GLN 48 PRO 49 PHE 50 GLY 51 LEU 52 LEU 53 HIS 54 GLY 55 GLY 56 ALA 57 SER 58 VAL 59 VAL 60 LEU 61 ALA 62 GLU 63 SER 64 ILE 65 GLY 66 SER 67 VAL 68 ALA 69 GLY 70 TYR 71 LEU 72 CYS 73 THR 74 GLU 75 GLY 76 GLU 77 GLN 78 LYS 79 VAL 80 VAL 81 GLY 82 LEU 83 GLU 84 ILE 85 ASN 86 ALA 87 ASN 88 HIS 89 VAL 90 ARG 91 SER 92 ALA 93 ARG 94 GLU 95 GLY 96 ARG 97 VAL 98 ARG 99 GLY 100 VAL 101 CYS 102 LYS 103 PRO 104 LEU 105 HIS 106 LEU 107 GLY 108 SER 109 ARG 110 HIS 111 GLN 112 VAL 113 TRP 114 GLN 115 ILE 116 GLU 117 ILE 118 PHE 119 ASP 120 GLU 121 LYS 122 GLY 123 ARG 124 LEU 125 CYS 126 CYS 127 SER 128 SER 129 ARG 130 LEU 131 THR 132 THR 133 ALA 134 ILE 135 LEU 136

Ligands

Unit 9	UOQ 201 CL 202 UOQ 203
Unit 10	UOQ 201 UOQ 202
Unit 11	UOQ 201
Unit 12	UOQ 501
Unit 13	UOQ 201 CL 202 UOQ 203 UOQ 204
Unit 14	UOQ 201
Unit 15	UOQ 201 UOQ 202 UOQ 203