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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF REDUCED TRYPAREDOXIN PEROXIDASE FROM LE MAJOR AT 2.34 A RESOLUTION
Keywords THIOREDOXIN FOLD, PEROXIDASE, OXIDOREDUCTASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   4K1F     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   TRYPAREDOXIN PEROXIDASE  A 198 1547 0
2  Protein   TRYPAREDOXIN PEROXIDASE  B 198 1547 0
3  Protein   TRYPAREDOXIN PEROXIDASE  C 198 1547 0
4  Protein   TRYPAREDOXIN PEROXIDASE  D 196 1532 0
5  Protein   TRYPAREDOXIN PEROXIDASE  E 197 1538 0
6  Ligand   TRYPAREDOXIN PEROXIDASE  A 2 0 11
7  Ligand   TRYPAREDOXIN PEROXIDASE  B 2 0 32
8  Ligand   TRYPAREDOXIN PEROXIDASE  C 2 0 8
9  Ligand   TRYPAREDOXIN PEROXIDASE  D 2 0 8
10  Ligand   TRYPAREDOXIN PEROXIDASE  E 2 0 8
11 Water     340 0 340
total       1337 7711 407
Proteins
Unit 1 SER2 CYS3 GLY4 ASN5 ALA6 LYS7 ILE8 ASN9 SER10 PRO11 ALA12 PRO13 SER14 PHE15 GLU16 GLU17 VAL18 ALA19 LEU20 MET21 PRO22 ASN23 GLY24 SER25 PHE26 LYS27 LYS28 ILE29 SER30 LEU31 SER32 SER33 TYR34 LYS35 GLY36 LYS37 TRP38 VAL39 VAL40 LEU41 PHE42 PHE43 TYR44 PRO45 LEU46 ASP47 PHE48 THR49 PHE50 VAL51 CYS52 PRO53 THR54 GLU55 VAL56 ILE57 ALA58 PHE59 SER60 ASP61 SER62 VAL63 SER64 ARG65 PHE66 ASN67 GLU68 LEU69 ASN70 CYS71 GLU72 VAL73 LEU74 ALA75 CYS76 SER77 ILE78 ASP79 SER80 GLU81 TYR82 ALA83 HIS84 LEU85 GLN86 TRP87 THR88 LEU89 GLN90 ASP91 ARG92 LYS93 LYS94 GLY95 GLY96 LEU97 GLY98 THR99 MET100 ALA101 ILE102 PRO103 ILE104 LEU105 ALA106 ASP107 LYS108 THR109 LYS110 ASN111 ILE112 ALA113 ARG114 SER115 TYR116 GLY117 VAL118 LEU119 GLU120 GLU121 SER122 GLN123 GLY124 VAL125 ALA126 TYR127 ARG128 GLY129 LEU130 PHE131 ILE132 ILE133 ASP134 PRO135 HIS136 GLY137 MET138 LEU139 ARG140 GLN141 ILE142 THR143 VAL144 ASN145 ASP146 MET147 PRO148 VAL149 GLY150 ARG151 SER152 VAL153 GLU154 GLU155 VAL156 LEU157 ARG158 LEU159 LEU160 GLU161 ALA162 PHE163 GLN164 PHE165 VAL166 GLU167 LYS168 HIS169 GLY170 GLU171 VAL172 CYS173 PRO174 ALA175 ASN176 TRP177 LYS178 LYS179 GLY180 ASP181 PRO182 GLY183 MET184 LYS185 PRO186 GLU187 PRO188 ASN189 ALA190 SER191 VAL192 GLU193 GLY194 TYR195 PHE196 SER197 LYS198 GLN199
Unit 2 SER2 CYS3 GLY4 ASN5 ALA6 LYS7 ILE8 ASN9 SER10 PRO11 ALA12 PRO13 SER14 PHE15 GLU16 GLU17 VAL18 ALA19 LEU20 MET21 PRO22 ASN23 GLY24 SER25 PHE26 LYS27 LYS28 ILE29 SER30 LEU31 SER32 SER33 TYR34 LYS35 GLY36 LYS37 TRP38 VAL39 VAL40 LEU41 PHE42 PHE43 TYR44 PRO45 LEU46 ASP47 PHE48 THR49 PHE50 VAL51 CYS52 PRO53 THR54 GLU55 VAL56 ILE57 ALA58 PHE59 SER60 ASP61 SER62 VAL63 SER64 ARG65 PHE66 ASN67 GLU68 LEU69 ASN70 CYS71 GLU72 VAL73 LEU74 ALA75 CYS76 SER77 ILE78 ASP79 SER80 GLU81 TYR82 ALA83 HIS84 LEU85 GLN86 TRP87 THR88 LEU89 GLN90 ASP91 ARG92 LYS93 LYS94 GLY95 GLY96 LEU97 GLY98 THR99 MET100 ALA101 ILE102 PRO103 ILE104 LEU105 ALA106 ASP107 LYS108 THR109 LYS110 ASN111 ILE112 ALA113 ARG114 SER115 TYR116 GLY117 VAL118 LEU119 GLU120 GLU121 SER122 GLN123 GLY124 VAL125 ALA126 TYR127 ARG128 GLY129 LEU130 PHE131 ILE132 ILE133 ASP134 PRO135 HIS136 GLY137 MET138 LEU139 ARG140 GLN141 ILE142 THR143 VAL144 ASN145 ASP146 MET147 PRO148 VAL149 GLY150 ARG151 SER152 VAL153 GLU154 GLU155 VAL156 LEU157 ARG158 LEU159 LEU160 GLU161 ALA162 PHE163 GLN164 PHE165 VAL166 GLU167 LYS168 HIS169 GLY170 GLU171 VAL172 CYS173 PRO174 ALA175 ASN176 TRP177 LYS178 LYS179 GLY180 ASP181 PRO182 GLY183 MET184 LYS185 PRO186 GLU187 PRO188 ASN189 ALA190 SER191 VAL192 GLU193 GLY194 TYR195 PHE196 SER197 LYS198 GLN199
Unit 3 SER2 CYS3 GLY4 ASN5 ALA6 LYS7 ILE8 ASN9 SER10 PRO11 ALA12 PRO13 SER14 PHE15 GLU16 GLU17 VAL18 ALA19 LEU20 MET21 PRO22 ASN23 GLY24 SER25 PHE26 LYS27 LYS28 ILE29 SER30 LEU31 SER32 SER33 TYR34 LYS35 GLY36 LYS37 TRP38 VAL39 VAL40 LEU41 PHE42 PHE43 TYR44 PRO45 LEU46 ASP47 PHE48 THR49 PHE50 VAL51 CYS52 PRO53 THR54 GLU55 VAL56 ILE57 ALA58 PHE59 SER60 ASP61 SER62 VAL63 SER64 ARG65 PHE66 ASN67 GLU68 LEU69 ASN70 CYS71 GLU72 VAL73 LEU74 ALA75 CYS76 SER77 ILE78 ASP79 SER80 GLU81 TYR82 ALA83 HIS84 LEU85 GLN86 TRP87 THR88 LEU89 GLN90 ASP91 ARG92 LYS93 LYS94 GLY95 GLY96 LEU97 GLY98 THR99 MET100 ALA101 ILE102 PRO103 ILE104 LEU105 ALA106 ASP107 LYS108 THR109 LYS110 ASN111 ILE112 ALA113 ARG114 SER115 TYR116 GLY117 VAL118 LEU119 GLU120 GLU121 SER122 GLN123 GLY124 VAL125 ALA126 TYR127 ARG128 GLY129 LEU130 PHE131 ILE132 ILE133 ASP134 PRO135 HIS136 GLY137 MET138 LEU139 ARG140 GLN141 ILE142 THR143 VAL144 ASN145 ASP146 MET147 PRO148 VAL149 GLY150 ARG151 SER152 VAL153 GLU154 GLU155 VAL156 LEU157 ARG158 LEU159 LEU160 GLU161 ALA162 PHE163 GLN164 PHE165 VAL166 GLU167 LYS168 HIS169 GLY170 GLU171 VAL172 CYS173 PRO174 ALA175 ASN176 TRP177 LYS178 LYS179 GLY180 ASP181 PRO182 GLY183 MET184 LYS185 PRO186 GLU187 PRO188 ASN189 ALA190 SER191 VAL192 GLU193 GLY194 TYR195 PHE196 SER197 LYS198 GLN199
Unit 4 CYS3 GLY4 ASN5 ALA6 LYS7 ILE8 ASN9 SER10 PRO11 ALA12 PRO13 SER14 PHE15 GLU16 GLU17 VAL18 ALA19 LEU20 MET21 PRO22 ASN23 GLY24 SER25 PHE26 LYS27 LYS28 ILE29 SER30 LEU31 SER32 SER33 TYR34 LYS35 GLY36 LYS37 TRP38 VAL39 VAL40 LEU41 PHE42 PHE43 TYR44 PRO45 LEU46 ASP47 PHE48 THR49 PHE50 VAL51 CYS52 PRO53 THR54 GLU55 VAL56 ILE57 ALA58 PHE59 SER60 ASP61 SER62 VAL63 SER64 ARG65 PHE66 ASN67 GLU68 LEU69 ASN70 CYS71 GLU72 VAL73 LEU74 ALA75 CYS76 SER77 ILE78 ASP79 SER80 GLU81 TYR82 ALA83 HIS84 LEU85 GLN86 TRP87 THR88 LEU89 GLN90 ASP91 ARG92 LYS93 LYS94 GLY95 GLY96 LEU97 GLY98 THR99 MET100 ALA101 ILE102 PRO103 ILE104 LEU105 ALA106 ASP107 LYS108 THR109 LYS110 ASN111 ILE112 ALA113 ARG114 SER115 TYR116 GLY117 VAL118 LEU119 GLU120 GLU121 SER122 GLN123 GLY124 VAL125 ALA126 TYR127 ARG128 GLY129 LEU130 PHE131 ILE132 ILE133 ASP134 PRO135 HIS136 GLY137 MET138 LEU139 ARG140 GLN141 ILE142 THR143 VAL144 ASN145 ASP146 MET147 PRO148 VAL149 GLY150 ARG151 SER152 VAL153 GLU154 GLU155 VAL156 LEU157 ARG158 LEU159 LEU160 GLU161 ALA162 PHE163 GLN164 PHE165 VAL166 GLU167 LYS168 HIS169 GLY170 GLU171 VAL172 CYS173 PRO174 ALA175 ASN176 TRP177 LYS178 LYS179 GLY180 ASP181 PRO182 GLY183 MET184 LYS185 PRO186 GLU187 PRO188 ASN189 ALA190 SER191 VAL192 GLU193 GLY194 TYR195 PHE196 SER197 LYS198
Unit 5 SER2 CYS3 GLY4 ASN5 ALA6 LYS7 ILE8 ASN9 SER10 PRO11 ALA12 PRO13 SER14 PHE15 GLU16 GLU17 VAL18 ALA19 LEU20 MET21 PRO22 ASN23 GLY24 SER25 PHE26 LYS27 LYS28 ILE29 SER30 LEU31 SER32 SER33 TYR34 LYS35 GLY36 LYS37 TRP38 VAL39 VAL40 LEU41 PHE42 PHE43 TYR44 PRO45 LEU46 ASP47 PHE48 THR49 PHE50 VAL51 CYS52 PRO53 THR54 GLU55 VAL56 ILE57 ALA58 PHE59 SER60 ASP61 SER62 VAL63 SER64 ARG65 PHE66 ASN67 GLU68 LEU69 ASN70 CYS71 GLU72 VAL73 LEU74 ALA75 CYS76 SER77 ILE78 ASP79 SER80 GLU81 TYR82 ALA83 HIS84 LEU85 GLN86 TRP87 THR88 LEU89 GLN90 ASP91 ARG92 LYS93 LYS94 GLY95 GLY96 LEU97 GLY98 THR99 MET100 ALA101 ILE102 PRO103 ILE104 LEU105 ALA106 ASP107 LYS108 THR109 LYS110 ASN111 ILE112 ALA113 ARG114 SER115 TYR116 GLY117 VAL118 LEU119 GLU120 GLU121 SER122 GLN123 GLY124 VAL125 ALA126 TYR127 ARG128 GLY129 LEU130 PHE131 ILE132 ILE133 ASP134 PRO135 HIS136 GLY137 MET138 LEU139 ARG140 GLN141 ILE142 THR143 VAL144 ASN145 ASP146 MET147 PRO148 VAL149 GLY150 ARG151 SER152 VAL153 GLU154 GLU155 VAL156 LEU157 ARG158 LEU159 LEU160 GLU161 ALA162 PHE163 GLN164 PHE165 VAL166 GLU167 LYS168 HIS169 GLY170 GLU171 VAL172 CYS173 PRO174 ALA175 ASN176 TRP177 LYS178 LYS179 GLY180 ASP181 PRO182 GLY183 MET184 LYS185 PRO186 GLU187 PRO188 ASN189 ALA190 SER191 VAL192 GLU193 GLY194 TYR195 PHE196 SER197 LYS198
Ligands
Unit 6 PGE201 CL202
Unit 7 PEG300 PE8301
Unit 8 PEG201 CL202
Unit 9 PEG201 CL202
Unit 10 PEG201 CL202
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany