4K10 - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF LESHMANIASIS MAJOR FARNESYL DIPHOSPHATE IN COMPLEX WITH 3-FLUORO-1-(2-HYDROXY-2,2-DIPHOSPHONOETHYL) AND MG2+
• Keywords: GERANYL TRANSFERASE, FPPS, FARNESYL PYROPHOSPHATE SYNTHASE, DIPHOSPHATE SYNTHASE, TRANSFERASE-TRANSFERASE INHIBITOR COM
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	4K10	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	FARNESYL PYROPHOSPHATE SYNTHASE	A	358	2843	0
2	Protein	FARNESYL PYROPHOSPHATE SYNTHASE	B	358	2835	0
3	Protein	FARNESYL PYROPHOSPHATE SYNTHASE	D	360	2855	0
4	Protein	FARNESYL PYROPHOSPHATE SYNTHASE	C	360	2856	0
5	Ligand	FARNESYL PYROPHOSPHATE SYNTHASE	A	7	0	30
6	Ligand	FARNESYL PYROPHOSPHATE SYNTHASE	B	5	0	25
7	Ligand	FARNESYL PYROPHOSPHATE SYNTHASE	D	5	0	36
8	Ligand	FARNESYL PYROPHOSPHATE SYNTHASE	C	5	0	22
9	Water			262	0	262
total				1720	11389	375

Proteins

Unit 1	MET 1 ALA 2 HIS 3 MET 4 GLU 5 ARG 6 PHE 7 GLN 8 LYS 9 VAL 10 TYR 11 GLU 12 GLU 13 VAL 14 GLN 15 GLU 16 PHE 17 LEU 18 LEU 19 GLY 20 ASP 21 ALA 22 GLU 23 LYS 24 ARG 25 PHE 26 GLU 27 MET 28 ASP 29 VAL 30 HIS 31 ARG 32 LYS 33 GLY 34 TYR 35 LEU 36 LYS 37 SER 38 MET 39 MET 40 ASP 41 THR 42 THR 43 CYS 44 LEU 45 GLY 46 GLY 47 LYS 48 TYR 49 ASN 50 ARG 51 GLY 52 LEU 53 CYS 54 VAL 55 VAL 56 ASP 57 VAL 58 ALA 59 GLU 60 ALA 61 MET 62 ALA 63 LYS 64 ASP 65 THR 66 GLN 67 MET 68 ASP 69 ALA 70 ALA 71 ALA 72 MET 73 GLU 74 ARG 75 VAL 76 LEU 77 HIS 78 ASP 79 ALA 80 CYS 81 VAL 82 CYS 83 GLY 84 TRP 85 MET 86 ILE 87 GLU 88 MET 89 LEU 90 GLN 91 ALA 92 HIS 93 PHE 94 LEU 95 VAL 96 GLU 97 ASP 98 ASP 99 ILE 100 MET 101 ASP 102 HIS 103 SER 104 LYS 105 THR 106 ARG 107 ARG 108 GLY 109 LYS 110 PRO 111 CYS 112 TRP 113 TYR 114 LEU 115 HIS 116 PRO 117 GLY 118 VAL 119 THR 120 ALA 121 GLN 122 VAL 123 ALA 124 ILE 125 ASN 126 ASP 127 GLY 128 LEU 129 ILE 130 LEU 131 LEU 132 ALA 133 TRP 134 ALA 135 THR 136 GLN 137 MET 138 ALA 139 LEU 140 HIS 141 TYR 142 PHE 143 ALA 144 ASP 145 ARG 146 PRO 147 PHE 148 LEU 149 ALA 150 GLU 151 VAL 152 LEU 153 ARG 154 VAL 155 PHE 156 HIS 157 ASP 158 VAL 159 ASP 160 LEU 161 THR 162 THR 163 THR 164 ILE 165 GLY 166 GLN 167 LEU 168 TYR 169 ASP 170 VAL 171 THR 172 SER 173 MET 174 VAL 175 ASP 176 SER 177 ALA 178 LYS 179 LEU 180 ASP 181 ALA 182 LYS 183 VAL 184 ALA 185 HIS 186 ALA 187 ASN 188 THR 189 THR 190 ASP 191 TYR 192 VAL 193 GLU 194 TYR 195 THR 196 PRO 197 PHE 198 ASN 199 HIS 200 ARG 201 ARG 202 ILE 203 VAL 204 VAL 205 TYR 206 LYS 207 THR 208 ALA 209 TYR 210 TYR 211 THR 212 TYR 213 TRP 214 LEU 215 PRO 216 LEU 217 VAL 218 MET 219 GLY 220 LEU 221 LEU 222 VAL 223 SER 224 GLY 225 THR 226 LEU 227 GLU 228 LYS 229 VAL 230 ASP 231 LYS 232 LYS 233 ALA 234 THR 235 HIS 236 LYS 237 VAL 238 ALA 239 MET 240 VAL 241 MET 242 GLY 243 GLU 244 TYR 245 PHE 246 GLN 247 VAL 248 GLN 249 ASP 250 ASP 251 VAL 252 MET 253 ASP 254 CYS 255 PHE 256 THR 257 PRO 258 PRO 259 GLU 260 LYS 264 ILE 265 GLY 266 THR 267 ASP 268 ILE 269 GLU 270 ASP 271 ALA 272 LYS 273 CYS 274 SER 275 TRP 276 LEU 277 ALA 278 VAL 279 THR 280 PHE 281 LEU 282 THR 283 THR 284 ALA 285 PRO 286 ALA 287 GLU 288 LYS 289 VAL 290 ALA 291 GLU 292 PHE 293 LYS 294 ALA 295 ASN 296 TYR 297 GLY 298 SER 299 THR 300 ASP 301 PRO 302 ALA 303 ALA 304 VAL 305 ALA 306 VAL 307 ILE 308 LYS 309 GLN 310 LEU 311 TYR 312 THR 313 GLU 314 GLN 315 ASN 316 LEU 317 LEU 318 ALA 319 ARG 320 PHE 321 GLU 322 GLU 323 TYR 324 GLU 325 LYS 326 ALA 327 VAL 328 VAL 329 ALA 330 GLU 331 VAL 332 GLU 333 GLN 334 LEU 335 ILE 336 ALA 337 ALA 338 LEU 339 GLU 340 ALA 341 GLN 342 ASN 343 ALA 344 ALA 345 PHE 346 ALA 347 ALA 348 SER 349 VAL 350 LYS 351 VAL 352 LEU 353 TRP 354 SER 355 LYS 356 THR 357 TYR 358 LYS 359 ARG 360 GLN 361
Unit 2	MET 1 ALA 2 HIS 3 MET 4 GLU 5 ARG 6 PHE 7 GLN 8 LYS 9 VAL 10 TYR 11 GLU 12 GLU 13 VAL 14 GLN 15 GLU 16 PHE 17 LEU 18 LEU 19 GLY 20 ASP 21 ALA 22 GLU 23 LYS 24 ARG 25 PHE 26 GLU 27 MET 28 ASP 29 VAL 30 HIS 31 ARG 32 LYS 33 GLY 34 TYR 35 LEU 36 LYS 37 SER 38 MET 39 MET 40 ASP 41 THR 42 THR 43 CYS 44 LEU 45 GLY 46 GLY 47 LYS 48 TYR 49 ASN 50 ARG 51 GLY 52 LEU 53 CYS 54 VAL 55 VAL 56 ASP 57 VAL 58 ALA 59 GLU 60 ALA 61 MET 62 ALA 63 LYS 64 ASP 65 THR 66 GLN 67 MET 68 ASP 69 ALA 70 ALA 71 ALA 72 MET 73 GLU 74 ARG 75 VAL 76 LEU 77 HIS 78 ASP 79 ALA 80 CYS 81 VAL 82 CYS 83 GLY 84 TRP 85 MET 86 ILE 87 GLU 88 MET 89 LEU 90 GLN 91 ALA 92 HIS 93 PHE 94 LEU 95 VAL 96 GLU 97 ASP 98 ASP 99 ILE 100 MET 101 ASP 102 HIS 103 SER 104 LYS 105 THR 106 ARG 107 ARG 108 GLY 109 LYS 110 PRO 111 CYS 112 TRP 113 TYR 114 LEU 115 HIS 116 PRO 117 GLY 118 VAL 119 THR 120 ALA 121 GLN 122 VAL 123 ALA 124 ILE 125 ASN 126 ASP 127 GLY 128 LEU 129 ILE 130 LEU 131 LEU 132 ALA 133 TRP 134 ALA 135 THR 136 GLN 137 MET 138 ALA 139 LEU 140 HIS 141 TYR 142 PHE 143 ALA 144 ASP 145 ARG 146 PRO 147 PHE 148 LEU 149 ALA 150 GLU 151 VAL 152 LEU 153 ARG 154 VAL 155 PHE 156 HIS 157 ASP 158 VAL 159 ASP 160 LEU 161 THR 162 THR 163 THR 164 ILE 165 GLY 166 GLN 167 LEU 168 TYR 169 ASP 170 VAL 171 THR 172 SER 173 MET 174 VAL 175 ASP 176 SER 177 ALA 178 LYS 179 LEU 180 ASP 181 ALA 182 LYS 183 VAL 184 ALA 185 HIS 186 ALA 187 ASN 188 THR 189 THR 190 ASP 191 TYR 192 VAL 193 GLU 194 TYR 195 THR 196 PRO 197 PHE 198 ASN 199 HIS 200 ARG 201 ARG 202 ILE 203 VAL 204 VAL 205 TYR 206 LYS 207 THR 208 ALA 209 TYR 210 TYR 211 THR 212 TYR 213 TRP 214 LEU 215 PRO 216 LEU 217 VAL 218 MET 219 GLY 220 LEU 221 LEU 222 VAL 223 SER 224 GLY 225 THR 226 LEU 227 GLU 228 LYS 229 VAL 230 ASP 231 LYS 232 LYS 233 ALA 234 THR 235 HIS 236 LYS 237 VAL 238 ALA 239 MET 240 VAL 241 MET 242 GLY 243 GLU 244 TYR 245 PHE 246 GLN 247 VAL 248 GLN 249 ASP 250 ASP 251 VAL 252 MET 253 ASP 254 CYS 255 PHE 256 THR 257 PRO 258 PRO 259 GLU 260 LYS 261 LEU 262 GLY 263 LYS 264 ILE 265 GLY 266 THR 267 ASP 268 ILE 269 GLU 270 ASP 271 ALA 272 LYS 273 CYS 274 SER 275 TRP 276 LEU 277 ALA 278 VAL 279 THR 280 PHE 281 LEU 282 THR 283 THR 284 ALA 285 PRO 286 ALA 287 GLU 288 LYS 289 VAL 290 ALA 291 GLU 292 PHE 293 LYS 294 ALA 295 ASN 296 TYR 297 GLY 298 SER 299 THR 300 ASP 301 PRO 302 ALA 303 ALA 304 VAL 305 ALA 306 VAL 307 ILE 308 LYS 309 GLN 310 LEU 311 TYR 312 THR 313 GLU 314 GLN 315 ASN 316 LEU 317 LEU 318 ALA 319 ARG 320 PHE 321 GLU 322 GLU 323 TYR 324 GLU 325 LYS 326 ALA 327 VAL 328 VAL 329 ALA 330 GLU 331 VAL 332 GLU 333 GLN 334 LEU 335 ILE 336 ALA 337 ALA 338 LEU 339 GLU 340 ALA 341 GLN 342 ASN 343 ALA 344 ALA 345 PHE 346 ALA 347 ALA 348 SER 349 VAL 350 LYS 351 VAL 352 LEU 353 TRP 354 SER 355 LYS 356 THR 357 TYR 358
Unit 3	MET 1 ALA 2 HIS 3 MET 4 GLU 5 ARG 6 PHE 7 GLN 8 LYS 9 VAL 10 TYR 11 GLU 12 GLU 13 VAL 14 GLN 15 GLU 16 PHE 17 LEU 18 LEU 19 GLY 20 ASP 21 ALA 22 GLU 23 LYS 24 ARG 25 PHE 26 GLU 27 MET 28 ASP 29 VAL 30 HIS 31 ARG 32 LYS 33 GLY 34 TYR 35 LEU 36 LYS 37 SER 38 MET 39 MET 40 ASP 41 THR 42 THR 43 CYS 44 LEU 45 GLY 46 GLY 47 LYS 48 TYR 49 ASN 50 ARG 51 GLY 52 LEU 53 CYS 54 VAL 55 VAL 56 ASP 57 VAL 58 ALA 59 GLU 60 ALA 61 MET 62 ALA 63 LYS 64 ASP 65 THR 66 GLN 67 MET 68 ASP 69 ALA 70 ALA 71 ALA 72 MET 73 GLU 74 ARG 75 VAL 76 LEU 77 HIS 78 ASP 79 ALA 80 CYS 81 VAL 82 CYS 83 GLY 84 TRP 85 MET 86 ILE 87 GLU 88 MET 89 LEU 90 GLN 91 ALA 92 HIS 93 PHE 94 LEU 95 VAL 96 GLU 97 ASP 98 ASP 99 ILE 100 MET 101 ASP 102 HIS 103 SER 104 LYS 105 THR 106 ARG 107 ARG 108 GLY 109 LYS 110 PRO 111 CYS 112 TRP 113 TYR 114 LEU 115 HIS 116 PRO 117 GLY 118 VAL 119 THR 120 ALA 121 GLN 122 VAL 123 ALA 124 ILE 125 ASN 126 ASP 127 GLY 128 LEU 129 ILE 130 LEU 131 LEU 132 ALA 133 TRP 134 ALA 135 THR 136 GLN 137 MET 138 ALA 139 LEU 140 HIS 141 TYR 142 PHE 143 ALA 144 ASP 145 ARG 146 PRO 147 PHE 148 LEU 149 ALA 150 GLU 151 VAL 152 LEU 153 ARG 154 VAL 155 PHE 156 HIS 157 ASP 158 VAL 159 ASP 160 LEU 161 THR 162 THR 163 THR 164 ILE 165 GLY 166 GLN 167 LEU 168 TYR 169 ASP 170 VAL 171 THR 172 SER 173 MET 174 VAL 175 ASP 176 SER 177 ALA 178 LYS 179 LEU 180 ASP 181 ALA 182 LYS 183 VAL 184 ALA 185 HIS 186 ALA 187 ASN 188 THR 189 THR 190 ASP 191 TYR 192 VAL 193 GLU 194 TYR 195 THR 196 PRO 197 PHE 198 ASN 199 HIS 200 ARG 201 ARG 202 ILE 203 VAL 204 VAL 205 TYR 206 LYS 207 THR 208 ALA 209 TYR 210 TYR 211 THR 212 TYR 213 TRP 214 LEU 215 PRO 216 LEU 217 VAL 218 MET 219 GLY 220 LEU 221 LEU 222 VAL 223 SER 224 GLY 225 THR 226 LEU 227 GLU 228 LYS 229 VAL 230 ASP 231 LYS 232 LYS 233 ALA 234 THR 235 HIS 236 LYS 237 VAL 238 ALA 239 MET 240 VAL 241 MET 242 GLY 243 GLU 244 TYR 245 PHE 246 GLN 247 VAL 248 GLN 249 ASP 250 ASP 251 VAL 252 MET 253 ASP 254 CYS 255 PHE 256 THR 257 PRO 258 PRO 259 GLU 260 LYS 261 LEU 262 GLY 263 LYS 264 ILE 265 GLY 266 THR 267 ASP 268 ILE 269 GLU 270 ASP 271 ALA 272 LYS 273 CYS 274 SER 275 TRP 276 LEU 277 ALA 278 VAL 279 THR 280 PHE 281 LEU 282 THR 283 THR 284 ALA 285 PRO 286 ALA 287 GLU 288 LYS 289 VAL 290 ALA 291 GLU 292 PHE 293 LYS 294 ALA 295 ASN 296 TYR 297 GLY 298 SER 299 THR 300 ASP 301 PRO 302 ALA 303 ALA 304 VAL 305 ALA 306 VAL 307 ILE 308 LYS 309 GLN 310 LEU 311 TYR 312 THR 313 GLU 314 GLN 315 ASN 316 LEU 317 LEU 318 ALA 319 ARG 320 PHE 321 GLU 322 GLU 323 TYR 324 GLU 325 LYS 326 ALA 327 VAL 328 VAL 329 ALA 330 GLU 331 VAL 332 GLU 333 GLN 334 LEU 335 ILE 336 ALA 337 ALA 338 LEU 339 GLU 340 ALA 341 GLN 342 ASN 343 ALA 344 ALA 345 PHE 346 ALA 347 ALA 348 SER 349 VAL 350 LYS 351 VAL 352 LEU 353 TRP 354 SER 355 LYS 356 THR 357 TYR 358 LYS 359 ARG 360
Unit 4	MET 1 ALA 2 HIS 3 MET 4 GLU 5 ARG 6 PHE 7 GLN 8 LYS 9 VAL 10 TYR 11 GLU 12 GLU 13 VAL 14 GLN 15 GLU 16 PHE 17 LEU 18 LEU 19 GLY 20 ASP 21 ALA 22 GLU 23 LYS 24 ARG 25 PHE 26 GLU 27 MET 28 ASP 29 VAL 30 HIS 31 ARG 32 LYS 33 GLY 34 TYR 35 LEU 36 LYS 37 SER 38 MET 39 MET 40 ASP 41 THR 42 THR 43 CYS 44 LEU 45 GLY 46 GLY 47 LYS 48 TYR 49 ASN 50 ARG 51 GLY 52 LEU 53 CYS 54 VAL 55 VAL 56 ASP 57 VAL 58 ALA 59 GLU 60 ALA 61 MET 62 ALA 63 LYS 64 ASP 65 THR 66 GLN 67 MET 68 ASP 69 ALA 70 ALA 71 ALA 72 MET 73 GLU 74 ARG 75 VAL 76 LEU 77 HIS 78 ASP 79 ALA 80 CYS 81 VAL 82 CYS 83 GLY 84 TRP 85 MET 86 ILE 87 GLU 88 MET 89 LEU 90 GLN 91 ALA 92 HIS 93 PHE 94 LEU 95 VAL 96 GLU 97 ASP 98 ASP 99 ILE 100 MET 101 ASP 102 HIS 103 SER 104 LYS 105 THR 106 ARG 107 ARG 108 GLY 109 LYS 110 PRO 111 CYS 112 TRP 113 TYR 114 LEU 115 HIS 116 PRO 117 GLY 118 VAL 119 THR 120 ALA 121 GLN 122 VAL 123 ALA 124 ILE 125 ASN 126 ASP 127 GLY 128 LEU 129 ILE 130 LEU 131 LEU 132 ALA 133 TRP 134 ALA 135 THR 136 GLN 137 MET 138 ALA 139 LEU 140 HIS 141 TYR 142 PHE 143 ALA 144 ASP 145 ARG 146 PRO 147 PHE 148 LEU 149 ALA 150 GLU 151 VAL 152 LEU 153 ARG 154 VAL 155 PHE 156 HIS 157 ASP 158 VAL 159 ASP 160 LEU 161 THR 162 THR 163 THR 164 ILE 165 GLY 166 GLN 167 LEU 168 TYR 169 ASP 170 VAL 171 THR 172 SER 173 MET 174 VAL 175 ASP 176 SER 177 ALA 178 LYS 179 LEU 180 ASP 181 ALA 182 LYS 183 VAL 184 ALA 185 HIS 186 ALA 187 ASN 188 THR 189 THR 190 ASP 191 TYR 192 VAL 193 GLU 194 TYR 195 THR 196 PRO 197 PHE 198 ASN 199 HIS 200 ARG 201 ARG 202 ILE 203 VAL 204 VAL 205 TYR 206 LYS 207 THR 208 ALA 209 TYR 210 TYR 211 THR 212 TYR 213 TRP 214 LEU 215 PRO 216 LEU 217 VAL 218 MET 219 GLY 220 LEU 221 LEU 222 VAL 223 SER 224 GLY 225 THR 226 LEU 227 GLU 228 LYS 229 VAL 230 ASP 231 LYS 232 LYS 233 ALA 234 THR 235 HIS 236 LYS 237 VAL 238 ALA 239 MET 240 VAL 241 MET 242 GLY 243 GLU 244 TYR 245 PHE 246 GLN 247 VAL 248 GLN 249 ASP 250 ASP 251 VAL 252 MET 253 ASP 254 CYS 255 PHE 256 THR 257 PRO 258 PRO 259 GLU 260 LYS 261 GLY 263 LYS 264 ILE 265 GLY 266 THR 267 ASP 268 ILE 269 GLU 270 ASP 271 ALA 272 LYS 273 CYS 274 SER 275 TRP 276 LEU 277 ALA 278 VAL 279 THR 280 PHE 281 LEU 282 THR 283 THR 284 ALA 285 PRO 286 ALA 287 GLU 288 LYS 289 VAL 290 ALA 291 GLU 292 PHE 293 LYS 294 ALA 295 ASN 296 TYR 297 GLY 298 SER 299 THR 300 ASP 301 PRO 302 ALA 303 ALA 304 VAL 305 ALA 306 VAL 307 ILE 308 LYS 309 GLN 310 LEU 311 TYR 312 THR 313 GLU 314 GLN 315 ASN 316 LEU 317 LEU 318 ALA 319 ARG 320 PHE 321 GLU 322 GLU 323 TYR 324 GLU 325 LYS 326 ALA 327 VAL 328 VAL 329 ALA 330 GLU 331 VAL 332 GLU 333 GLN 334 LEU 335 ILE 336 ALA 337 ALA 338 LEU 339 GLU 340 ALA 341 GLN 342 ASN 343 ALA 344 ALA 345 PHE 346 ALA 347 ALA 348 SER 349 VAL 350 LYS 351 VAL 352 LEU 353 TRP 354 SER 355 LYS 356 THR 357 TYR 358 LYS 359 ARG 360 GLN 361

Ligands

Unit 5	NA 401 NA 402 NA 403 MG 404 MG 405 NI9 406 PEG 407
Unit 6	NA 401 ACT 402 MG 403 MG 404 NI9 405
Unit 7	MES 401 ACT 402 MG 403 MG 404 NI9 405
Unit 8	NA 401 NA 402 MG 403 MG 404 NI9 405