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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF THE AMYLOID-FORMING IMMUNOGLOBULIN AL-1 PROLINE 95 MUTANT
Keywords IMMUNOGLOBULIN VARIABLE DOMAIN, AMYLOID PROTEIN, PATIENT-DER SEQUENCE, IMMUNE SYSTEM
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   4K07     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein    A 108 1640 0
2  Protein    B 108 1640 0
3  Protein    C 108 1639 0
4  Protein    D 108 1640 0
5  Protein    E 108 1640 0
6  Protein    F 108 1640 0
7  Protein    G 108 1640 0
8  Protein    H 108 1640 0
9  Protein    I 108 1640 0
10  Protein    J 108 1640 0
11  Ligand    B 1 0 5
12 Water     32 0 33
total       1113 16399 38
Proteins
Unit 1 THR0 ASP1 ILE2 GLN3 MET4 THR5 GLN6 SER7 PRO8 SER9 SER10 LEU11 SER12 ALA13 SER14 VAL15 GLY16 ASP17 ARG18 VAL19 THR20 ILE21 THR22 CYS23 GLN24 ALA25 SER26 GLN27 ASP28 ILE29 SER30 ASN31 TYR32 LEU33 ILE34 TRP35 TYR36 GLN37 GLN38 LYS39 PRO40 GLY41 LYS42 ALA43 PRO44 LYS45 LEU46 LEU47 ILE48 TYR49 ASP50 ALA51 SER52 ASN53 LEU54 GLU55 THR56 GLY57 VAL58 PRO59 SER60 ARG61 PHE62 SER63 GLY64 SER65 GLY66 SER67 GLY68 THR69 ASP70 PHE71 THR72 PHE73 THR74 ILE75 SER76 SER77 LEU78 GLN79 PRO80 GLU81 ASP82 ILE83 ALA84 THR85 TYR86 TYR87 CYS88 GLN89 GLN90 TYR91 HIS92 ASN93 LEU94 PRO95 TYR96 THR97 PHE98 GLY99 PRO100 GLY101 THR102 LYS103 LEU104 GLU105 ILE106 LYS107
Unit 2 THR0 ASP1 ILE2 GLN3 MET4 THR5 GLN6 SER7 PRO8 SER9 SER10 LEU11 SER12 ALA13 SER14 VAL15 GLY16 ASP17 ARG18 VAL19 THR20 ILE21 THR22 CYS23 GLN24 ALA25 SER26 GLN27 ASP28 ILE29 SER30 ASN31 TYR32 LEU33 ILE34 TRP35 TYR36 GLN37 GLN38 LYS39 PRO40 GLY41 LYS42 ALA43 PRO44 LYS45 LEU46 LEU47 ILE48 TYR49 ASP50 ALA51 SER52 ASN53 LEU54 GLU55 THR56 GLY57 VAL58 PRO59 SER60 ARG61 PHE62 SER63 GLY64 SER65 GLY66 SER67 GLY68 THR69 ASP70 PHE71 THR72 PHE73 THR74 ILE75 SER76 SER77 LEU78 GLN79 PRO80 GLU81 ASP82 ILE83 ALA84 THR85 TYR86 TYR87 CYS88 GLN89 GLN90 TYR91 HIS92 ASN93 LEU94 PRO95 TYR96 THR97 PHE98 GLY99 PRO100 GLY101 THR102 LYS103 LEU104 GLU105 ILE106 LYS107
Unit 3 THR0 ASP1 ILE2 GLN3 MET4 THR5 GLN6 SER7 PRO8 SER9 SER10 LEU11 SER12 ALA13 SER14 VAL15 GLY16 ASP17 ARG18 VAL19 THR20 ILE21 THR22 CYS23 GLN24 ALA25 SER26 GLN27 ASP28 ILE29 SER30 ASN31 TYR32 LEU33 ILE34 TRP35 TYR36 GLN37 GLN38 LYS39 PRO40 GLY41 LYS42 ALA43 PRO44 LYS45 LEU46 LEU47 ILE48 TYR49 ASP50 ALA51 SER52 ASN53 LEU54 GLU55 THR56 GLY57 VAL58 PRO59 SER60 ARG61 PHE62 SER63 GLY64 SER65 GLY66 SER67 GLY68 THR69 ASP70 PHE71 THR72 PHE73 THR74 ILE75 SER76 SER77 LEU78 GLN79 PRO80 GLU81 ASP82 ILE83 ALA84 THR85 TYR86 TYR87 CYS88 GLN89 GLN90 TYR91 HIS92 ASN93 LEU94 PRO95 TYR96 THR97 PHE98 GLY99 PRO100 GLY101 THR102 LYS103 LEU104 GLU105 ILE106 LYS107
Unit 4 THR0 ASP1 ILE2 GLN3 MET4 THR5 GLN6 SER7 PRO8 SER9 SER10 LEU11 SER12 ALA13 SER14 VAL15 GLY16 ASP17 ARG18 VAL19 THR20 ILE21 THR22 CYS23 GLN24 ALA25 SER26 GLN27 ASP28 ILE29 SER30 ASN31 TYR32 LEU33 ILE34 TRP35 TYR36 GLN37 GLN38 LYS39 PRO40 GLY41 LYS42 ALA43 PRO44 LYS45 LEU46 LEU47 ILE48 TYR49 ASP50 ALA51 SER52 ASN53 LEU54 GLU55 THR56 GLY57 VAL58 PRO59 SER60 ARG61 PHE62 SER63 GLY64 SER65 GLY66 SER67 GLY68 THR69 ASP70 PHE71 THR72 PHE73 THR74 ILE75 SER76 SER77 LEU78 GLN79 PRO80 GLU81 ASP82 ILE83 ALA84 THR85 TYR86 TYR87 CYS88 GLN89 GLN90 TYR91 HIS92 ASN93 LEU94 PRO95 TYR96 THR97 PHE98 GLY99 PRO100 GLY101 THR102 LYS103 LEU104 GLU105 ILE106 LYS107
Unit 5 THR0 ASP1 ILE2 GLN3 MET4 THR5 GLN6 SER7 PRO8 SER9 SER10 LEU11 SER12 ALA13 SER14 VAL15 GLY16 ASP17 ARG18 VAL19 THR20 ILE21 THR22 CYS23 GLN24 ALA25 SER26 GLN27 ASP28 ILE29 SER30 ASN31 TYR32 LEU33 ILE34 TRP35 TYR36 GLN37 GLN38 LYS39 PRO40 GLY41 LYS42 ALA43 PRO44 LYS45 LEU46 LEU47 ILE48 TYR49 ASP50 ALA51 SER52 ASN53 LEU54 GLU55 THR56 GLY57 VAL58 PRO59 SER60 ARG61 PHE62 SER63 GLY64 SER65 GLY66 SER67 GLY68 THR69 ASP70 PHE71 THR72 PHE73 THR74 ILE75 SER76 SER77 LEU78 GLN79 PRO80 GLU81 ASP82 ILE83 ALA84 THR85 TYR86 TYR87 CYS88 GLN89 GLN90 TYR91 HIS92 ASN93 LEU94 PRO95 TYR96 THR97 PHE98 GLY99 PRO100 GLY101 THR102 LYS103 LEU104 GLU105 ILE106 LYS107
Unit 6 THR0 ASP1 ILE2 GLN3 MET4 THR5 GLN6 SER7 PRO8 SER9 SER10 LEU11 SER12 ALA13 SER14 VAL15 GLY16 ASP17 ARG18 VAL19 THR20 ILE21 THR22 CYS23 GLN24 ALA25 SER26 GLN27 ASP28 ILE29 SER30 ASN31 TYR32 LEU33 ILE34 TRP35 TYR36 GLN37 GLN38 LYS39 PRO40 GLY41 LYS42 ALA43 PRO44 LYS45 LEU46 LEU47 ILE48 TYR49 ASP50 ALA51 SER52 ASN53 LEU54 GLU55 THR56 GLY57 VAL58 PRO59 SER60 ARG61 PHE62 SER63 GLY64 SER65 GLY66 SER67 GLY68 THR69 ASP70 PHE71 THR72 PHE73 THR74 ILE75 SER76 SER77 LEU78 GLN79 PRO80 GLU81 ASP82 ILE83 ALA84 THR85 TYR86 TYR87 CYS88 GLN89 GLN90 TYR91 HIS92 ASN93 LEU94 PRO95 TYR96 THR97 PHE98 GLY99 PRO100 GLY101 THR102 LYS103 LEU104 GLU105 ILE106 LYS107
Unit 7 THR0 ASP1 ILE2 GLN3 MET4 THR5 GLN6 SER7 PRO8 SER9 SER10 LEU11 SER12 ALA13 SER14 VAL15 GLY16 ASP17 ARG18 VAL19 THR20 ILE21 THR22 CYS23 GLN24 ALA25 SER26 GLN27 ASP28 ILE29 SER30 ASN31 TYR32 LEU33 ILE34 TRP35 TYR36 GLN37 GLN38 LYS39 PRO40 GLY41 LYS42 ALA43 PRO44 LYS45 LEU46 LEU47 ILE48 TYR49 ASP50 ALA51 SER52 ASN53 LEU54 GLU55 THR56 GLY57 VAL58 PRO59 SER60 ARG61 PHE62 SER63 GLY64 SER65 GLY66 SER67 GLY68 THR69 ASP70 PHE71 THR72 PHE73 THR74 ILE75 SER76 SER77 LEU78 GLN79 PRO80 GLU81 ASP82 ILE83 ALA84 THR85 TYR86 TYR87 CYS88 GLN89 GLN90 TYR91 HIS92 ASN93 LEU94 PRO95 TYR96 THR97 PHE98 GLY99 PRO100 GLY101 THR102 LYS103 LEU104 GLU105 ILE106 LYS107
Unit 8 THR0 ASP1 ILE2 GLN3 MET4 THR5 GLN6 SER7 PRO8 SER9 SER10 LEU11 SER12 ALA13 SER14 VAL15 GLY16 ASP17 ARG18 VAL19 THR20 ILE21 THR22 CYS23 GLN24 ALA25 SER26 GLN27 ASP28 ILE29 SER30 ASN31 TYR32 LEU33 ILE34 TRP35 TYR36 GLN37 GLN38 LYS39 PRO40 GLY41 LYS42 ALA43 PRO44 LYS45 LEU46 LEU47 ILE48 TYR49 ASP50 ALA51 SER52 ASN53 LEU54 GLU55 THR56 GLY57 VAL58 PRO59 SER60 ARG61 PHE62 SER63 GLY64 SER65 GLY66 SER67 GLY68 THR69 ASP70 PHE71 THR72 PHE73 THR74 ILE75 SER76 SER77 LEU78 GLN79 PRO80 GLU81 ASP82 ILE83 ALA84 THR85 TYR86 TYR87 CYS88 GLN89 GLN90 TYR91 HIS92 ASN93 LEU94 PRO95 TYR96 THR97 PHE98 GLY99 PRO100 GLY101 THR102 LYS103 LEU104 GLU105 ILE106 LYS107
Unit 9 THR0 ASP1 ILE2 GLN3 MET4 THR5 GLN6 SER7 PRO8 SER9 SER10 LEU11 SER12 ALA13 SER14 VAL15 GLY16 ASP17 ARG18 VAL19 THR20 ILE21 THR22 CYS23 GLN24 ALA25 SER26 GLN27 ASP28 ILE29 SER30 ASN31 TYR32 LEU33 ILE34 TRP35 TYR36 GLN37 GLN38 LYS39 PRO40 GLY41 LYS42 ALA43 PRO44 LYS45 LEU46 LEU47 ILE48 TYR49 ASP50 ALA51 SER52 ASN53 LEU54 GLU55 THR56 GLY57 VAL58 PRO59 SER60 ARG61 PHE62 SER63 GLY64 SER65 GLY66 SER67 GLY68 THR69 ASP70 PHE71 THR72 PHE73 THR74 ILE75 SER76 SER77 LEU78 GLN79 PRO80 GLU81 ASP82 ILE83 ALA84 THR85 TYR86 TYR87 CYS88 GLN89 GLN90 TYR91 HIS92 ASN93 LEU94 PRO95 TYR96 THR97 PHE98 GLY99 PRO100 GLY101 THR102 LYS103 LEU104 GLU105 ILE106 LYS107
Unit 10 THR0 ASP1 ILE2 GLN3 MET4 THR5 GLN6 SER7 PRO8 SER9 SER10 LEU11 SER12 ALA13 SER14 VAL15 GLY16 ASP17 ARG18 VAL19 THR20 ILE21 THR22 CYS23 GLN24 ALA25 SER26 GLN27 ASP28 ILE29 SER30 ASN31 TYR32 LEU33 ILE34 TRP35 TYR36 GLN37 GLN38 LYS39 PRO40 GLY41 LYS42 ALA43 PRO44 LYS45 LEU46 LEU47 ILE48 TYR49 ASP50 ALA51 SER52 ASN53 LEU54 GLU55 THR56 GLY57 VAL58 PRO59 SER60 ARG61 PHE62 SER63 GLY64 SER65 GLY66 SER67 GLY68 THR69 ASP70 PHE71 THR72 PHE73 THR74 ILE75 SER76 SER77 LEU78 GLN79 PRO80 GLU81 ASP82 ILE83 ALA84 THR85 TYR86 TYR87 CYS88 GLN89 GLN90 TYR91 HIS92 ASN93 LEU94 PRO95 TYR96 THR97 PHE98 GLY99 PRO100 GLY101 THR102 LYS103 LEU104 GLU105 ILE106 LYS107
Ligands
Unit 11 SO4201
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany