4JZW - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF CD4-MIMETIC MINIPROTEIN M48U1 IN COMPLE HIV-1 YU2 GP120 IN P212121 SPACE GROUP
• Keywords: GLYCOPROTEIN, HIV-1 ATTACHMENT GLYCOPROTEIN, CD4-MIMETIC MIN CD4, HIV-1 ENVELOPE, VIRAL PROTEIN-INHIBITOR COMPLEX
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	4JZW	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	HIV-1 YU2 GP120 GLYCOPROTEIN	A	336	2640	0
2	Protein	HIV-1 YU2 GP120 GLYCOPROTEIN	G	339	2662	0
3	Protein	CD4-MIMETIC MINIPROTEIN M48U1	M	28	177	32
4	Protein	CD4-MIMETIC MINIPROTEIN M48U1	R	28	177	32
5	Ligand	HIV-1 YU2 GP120 GLYCOPROTEIN	A	16	0	165
6	Ligand	HIV-1 YU2 GP120 GLYCOPROTEIN	G	13	0	133
7	Water			936	0	936
total				1696	5656	1298

Proteins

Unit 1	VAL 44 TRP 45 LYS 46 GLU 47 ALA 48 THR 49 THR 50 THR 51 LEU 52 PHE 53 CYS 54 ALA 55 SER 56 ASP 57 ALA 58 LYS 59 ALA 60 TYR 61 ASP 62 THR 63 GLU 64 VAL 65 HIS 66 ASN 67 VAL 68 TRP 69 ALA 70 THR 71 HIS 72 ALA 73 CYS 74 VAL 75 PRO 76 THR 77 ASP 78 PRO 79 ASN 80 PRO 81 GLN 82 GLU 83 VAL 84 LYS 85 LEU 86 GLU 87 ASN 88 VAL 89 THR 90 GLU 91 ASN 92 PHE 93 ASN 94 MET 95 TRP 96 LYS 97 ASN 98 ASN 99 MET 100 VAL 101 GLU 102 GLN 103 MET 104 HIS 105 GLU 106 ASP 107 ILE 108 ILE 109 SER 110 LEU 111 TRP 112 ASP 113 GLN 114 SER 115 LEU 116 LYS 117 PRO 118 CYS 119 VAL 120 LYS 121 LEU 122 THR 123 GLY 124 GLY 198 SER 199 VAL 200 ILE 201 THR 202 GLN 203 ALA 204 CYS 205 PRO 206 LYS 207 VAL 208 SER 209 PHE 210 GLU 211 PRO 212 ILE 213 PRO 214 ILE 215 HIS 216 TYR 217 CYS 218 ALA 219 PRO 220 ALA 221 GLY 222 PHE 223 ALA 224 ILE 225 LEU 226 LYS 227 CYS 228 ASN 229 ASP 230 LYS 231 LYS 232 PHE 233 ASN 234 GLY 235 THR 236 GLY 237 PRO 238 CYS 239 THR 240 ASN 241 VAL 242 SER 243 THR 244 VAL 245 GLN 246 CYS 247 THR 248 HIS 249 GLY 250 ILE 251 ARG 252 PRO 253 VAL 254 VAL 255 SER 256 THR 257 GLN 258 LEU 259 LEU 260 LEU 261 ASN 262 GLY 263 SER 264 LEU 265 ALA 266 GLU 267 GLU 268 GLU 269 ILE 270 VAL 271 ILE 272 ARG 273 SER 274 GLU 275 ASN 276 PHE 277 THR 278 ASN 279 ASN 280 ALA 281 LYS 282 THR 283 ILE 284 ILE 285 VAL 286 GLN 287 LEU 288 ASN 289 GLU 290 SER 291 VAL 292 VAL 293 ILE 294 ASN 295 CYS 296 THR 297 ARG 298 PRO 299 ASN 300 ASN 301 ASP 325 ILE 326 ARG 327 GLN 328 ALA 329 HIS 330 CYS 331 ASN 332 LEU 333 SER 334 LYS 335 THR 336 GLN 337 TRP 338 GLU 339 ASN 340 THR 341 LEU 342 GLU 343 GLN 344 ILE 345 ALA 346 ILE 347 LYS 348 LEU 349 LYS 350 GLU 351 GLN 352 PHE 353 GLY 354 ASN 355 ASN 356 LYS 357 THR 358 ILE 359 ILE 360 PHE 361 ASN 362 PRO 363 SER 364 SER 365 GLY 366 GLY 367 ASP 368 PRO 369 GLU 370 ILE 371 VAL 372 THR 373 HIS 374 SER 375 PHE 376 ASN 377 CYS 378 GLY 379 GLY 380 GLU 381 PHE 382 PHE 383 TYR 384 CYS 385 ASN 386 SER 387 THR 388 GLN 389 LEU 390 PHE 391 THR 392 TRP 393 ASN 394 ASP 395 THR 396 ARG 397 GLY 411 ARG 412 ASN 413 ILE 414 THR 415 LEU 416 PRO 417 CYS 418 ARG 419 ILE 420 LYS 421 GLN 422 ILE 423 ILE 424 ASN 425 MET 426 TRP 427 GLN 428 GLU 429 VAL 430 GLY 431 LYS 432 ALA 433 MET 434 TYR 435 ALA 436 PRO 437 PRO 438 ILE 439 ARG 440 GLY 441 GLN 442 ILE 443 ARG 444 CYS 445 SER 446 SER 447 ASN 448 ILE 449 THR 450 GLY 451 LEU 452 LEU 453 LEU 454 THR 455 ARG 456 ASP 457 GLY 458 GLY 459 GLY 464 THR 465 GLU 466 ILE 467 PHE 468 ARG 469 PRO 470 GLY 471 GLY 472 GLY 473 ASP 474 MET 475 ARG 476 ASP 477 ASN 478 TRP 479 ARG 480 SER 481 GLU 482 LEU 483 TYR 484 LYS 485 TYR 486 LYS 487 VAL 488 VAL 489 LYS 490 ILE 491 GLU 492
Unit 2	VAL 44 TRP 45 LYS 46 GLU 47 ALA 48 THR 49 THR 50 THR 51 LEU 52 PHE 53 CYS 54 ALA 55 SER 56 ASP 57 ALA 58 LYS 59 ALA 60 TYR 61 ASP 62 THR 63 GLU 64 VAL 65 HIS 66 ASN 67 VAL 68 TRP 69 ALA 70 THR 71 HIS 72 ALA 73 CYS 74 VAL 75 PRO 76 THR 77 ASP 78 PRO 79 ASN 80 PRO 81 GLN 82 GLU 83 VAL 84 LYS 85 LEU 86 GLU 87 ASN 88 VAL 89 THR 90 GLU 91 ASN 92 PHE 93 ASN 94 MET 95 TRP 96 LYS 97 ASN 98 ASN 99 MET 100 VAL 101 GLU 102 GLN 103 MET 104 HIS 105 GLU 106 ASP 107 ILE 108 ILE 109 SER 110 LEU 111 TRP 112 ASP 113 GLN 114 SER 115 LEU 116 LYS 117 PRO 118 CYS 119 VAL 120 LYS 121 LEU 122 THR 123 GLY 124 GLY 198 SER 199 VAL 200 ILE 201 THR 202 GLN 203 ALA 204 CYS 205 PRO 206 LYS 207 VAL 208 SER 209 PHE 210 GLU 211 PRO 212 ILE 213 PRO 214 ILE 215 HIS 216 TYR 217 CYS 218 ALA 219 PRO 220 ALA 221 GLY 222 PHE 223 ALA 224 ILE 225 LEU 226 LYS 227 CYS 228 ASN 229 ASP 230 LYS 231 LYS 232 PHE 233 ASN 234 GLY 235 THR 236 GLY 237 PRO 238 CYS 239 THR 240 ASN 241 VAL 242 SER 243 THR 244 VAL 245 GLN 246 CYS 247 THR 248 HIS 249 GLY 250 ILE 251 ARG 252 PRO 253 VAL 254 VAL 255 SER 256 THR 257 GLN 258 LEU 259 LEU 260 LEU 261 ASN 262 GLY 263 SER 264 LEU 265 ALA 266 GLU 267 GLU 268 GLU 269 ILE 270 VAL 271 ILE 272 ARG 273 SER 274 GLU 275 ASN 276 PHE 277 THR 278 ASN 279 ASN 280 ALA 281 LYS 282 THR 283 ILE 284 ILE 285 VAL 286 GLN 287 LEU 288 ASN 289 GLU 290 SER 291 VAL 292 VAL 293 ILE 294 ASN 295 CYS 296 THR 297 ARG 298 PRO 299 ASN 300 ASN 301 ASP 325 ILE 326 ARG 327 GLN 328 ALA 329 HIS 330 CYS 331 ASN 332 LEU 333 SER 334 LYS 335 THR 336 GLN 337 TRP 338 GLU 339 ASN 340 THR 341 LEU 342 GLU 343 GLN 344 ILE 345 ALA 346 ILE 347 LYS 348 LEU 349 LYS 350 GLU 351 GLN 352 PHE 353 GLY 354 ASN 355 ASN 356 LYS 357 THR 358 ILE 359 ILE 360 PHE 361 ASN 362 PRO 363 SER 364 SER 365 GLY 366 GLY 367 ASP 368 PRO 369 GLU 370 ILE 371 VAL 372 THR 373 HIS 374 SER 375 PHE 376 ASN 377 CYS 378 GLY 379 GLY 380 GLU 381 PHE 382 PHE 383 TYR 384 CYS 385 ASN 386 SER 387 THR 388 GLN 389 LEU 390 PHE 391 THR 392 TRP 393 ASN 394 ASP 395 THR 396 ARG 397 THR 410 GLY 411 ARG 412 ASN 413 ILE 414 THR 415 LEU 416 PRO 417 CYS 418 ARG 419 ILE 420 LYS 421 GLN 422 ILE 423 ILE 424 ASN 425 MET 426 TRP 427 GLN 428 GLU 429 VAL 430 GLY 431 LYS 432 ALA 433 MET 434 TYR 435 ALA 436 PRO 437 PRO 438 ILE 439 ARG 440 GLY 441 GLN 442 ILE 443 ARG 444 CYS 445 SER 446 SER 447 ASN 448 ILE 449 THR 450 GLY 451 LEU 452 LEU 453 LEU 454 THR 455 ARG 456 ASP 457 GLY 458 GLY 459 THR 462 ASN 463 GLY 464 THR 465 GLU 466 ILE 467 PHE 468 ARG 469 PRO 470 GLY 471 GLY 472 GLY 473 ASP 474 MET 475 ARG 476 ASP 477 ASN 478 TRP 479 ARG 480 SER 481 GLU 482 LEU 483 TYR 484 LYS 485 TYR 486 LYS 487 VAL 488 VAL 489 LYS 490 ILE 491 GLU 492
Unit 3	MPT 1 ASN 2 LEU 3 HIS 4 PHE 5 CYS 6 GLN 7 LEU 8 ARG 9 CYS 10 LYS 11 SER 12 LEU 13 GLY 14 LEU 15 LEU 16 GLY 17 ARG 18 CYS 19 ALA 20 DPR 21 THR 22 U2X 23 CYS 24 ALA 25 CYS 26 VAL 27 NH2 28
Unit 4	MPT 1 ASN 2 LEU 3 HIS 4 PHE 5 CYS 6 GLN 7 LEU 8 ARG 9 CYS 10 LYS 11 SER 12 LEU 13 GLY 14 LEU 15 LEU 16 GLY 17 ARG 18 CYS 19 ALA 20 DPR 21 THR 22 U2X 23 CYS 24 ALA 25 CYS 26 VAL 27 NH2 28

Ligands

Unit 5	NAG 501 NAG 502 NAG 503 NAG 504 NAG 505 NAG 506 NAG 507 NAG 508 NAG 509 IPA 510 IPA 511 IPA 512 SO4 513 NAG 514 IPA 515 IPA 516
Unit 6	NAG 501 NAG 502 NAG 503 NAG 504 NAG 505 NAG 506 NAG 507 NAG 508 IPA 509 IPA 510 IPA 511 EDO 512 SO4 513