4JZN - Sequence, Chains, Asymmetric and Biological Units

• Title: THREE DIMENSIONAL STRUCTURE OF BROADLY NEUTRALIZING HUMAN AN HEPATITIS C VIRUS (HCV) GLYCOPROTEIN E2 FAB FRAGMENT HC84-1
• Keywords: FAB FRAGMENT, IMMUNGLOBULIN FOLD, ANTIBODY, IMMUNE SYSTEM, V PROTEIN-IMMUNE SYSTEM COMPLEX, IMMUNE SYSTEM-VIRAL PROTEIN
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	4JZN	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	ANTI-HCV E2 FAB HC84-1 HEAVY CHAIN	A	212	1581	0
2	Protein	ANTI-HCV E2 FAB HC84-1 LIGHT CHAIN	B	213	1613	0
3	Protein	ANTI-HCV E2 FAB HC84-1 HEAVY CHAIN	C	203	1524	0
4	Protein	ANTI-HCV E2 FAB HC84-1 LIGHT CHAIN	D	212	1607	0
5	Protein	ANTI-HCV E2 FAB HC84-1 HEAVY CHAIN	I	215	1603	0
6	Protein	ENVELOPE GLYCOPROTEIN E2	K	12	101	0
7	Protein	ANTI-HCV E2 FAB HC84-1 LIGHT CHAIN	P	213	1613	0
8	Ligand	ENVELOPE GLYCOPROTEIN E2	K	1	0	5
9	Water			557	0	557
total				1838	9642	562

Proteins

Unit 1	GLN 1 VAL 2 GLN 3 LEU 4 VAL 5 GLN 6 SER 7 GLY 8 ALA 9 GLU 10 VAL 11 LYS 12 LYS 13 PRO 14 GLY 15 SER 16 SER 17 VAL 18 LYS 19 VAL 20 SER 21 CYS 22 GLU 23 ALA 24 SER 25 GLY 26 GLY 27 THR 28 TYR 32 VAL 33 ILE 34 THR 35 TRP 36 VAL 37 ARG 38 GLN 39 ALA 40 PRO 41 GLY 42 GLN 43 GLY 44 LEU 45 GLU 46 TRP 47 MET 48 GLY 49 GLY 50 PHE 51 ILE 52 PRO 53 THR 54 PHE 55 ARG 56 THR 57 ALA 58 MET 59 TYR 60 ALA 61 GLN 62 GLY 63 PHE 64 GLN 65 GLY 66 ARG 67 VAL 68 THR 69 ILE 70 THR 71 ALA 72 ASP 73 GLU 74 SER 75 THR 76 SER 77 ILE 78 ALA 79 TYR 80 MET 81 GLU 82 LEU 83 THR 84 ASN 85 LEU 86 ARG 87 SER 88 GLU 89 ASP 90 THR 91 ALA 92 VAL 93 TYR 94 TYR 95 CYS 96 ALA 97 ARG 98 GLY 99 PRO 100 LEU 101 SER 102 ARG 103 GLY 104 TYR 105 TYR 106 ASP 107 TYR 108 TRP 109 GLY 110 GLN 111 GLY 112 THR 113 LEU 114 VAL 115 THR 116 VAL 117 SER 118 SER 119 ALA 120 SER 121 THR 122 LYS 123 GLY 124 PRO 125 SER 126 VAL 127 PHE 128 PRO 129 LEU 130 ALA 131 PRO 132 GLY 139 GLY 140 THR 141 ALA 142 ALA 143 LEU 144 GLY 145 CYS 146 LEU 147 VAL 148 LYS 149 ASP 150 TYR 151 PHE 152 PRO 153 GLU 154 PRO 155 VAL 156 THR 157 VAL 158 SER 159 TRP 160 ASN 161 SER 162 GLY 163 ALA 164 LEU 165 THR 166 SER 167 GLY 168 VAL 169 HIS 170 THR 171 PHE 172 PRO 173 ALA 174 VAL 175 LEU 176 GLN 177 SER 178 SER 179 GLY 180 LEU 181 TYR 182 SER 183 LEU 184 SER 185 SER 186 VAL 187 VAL 188 THR 189 VAL 190 PRO 191 SER 192 SER 193 SER 194 LEU 195 GLY 196 THR 197 GLN 198 THR 199 TYR 200 ILE 201 CYS 202 ASN 203 VAL 204 ASN 205 HIS 206 LYS 207 PRO 208 SER 209 ASN 210 THR 211 LYS 212 VAL 213 ASP 214 LYS 215 LYS 216 ALA 217 GLU 218 PRO 219 LYS 220 SER 221
Unit 2	SER 1 TYR 2 VAL 3 LEU 4 THR 5 GLN 6 PRO 7 PRO 8 SER 9 VAL 10 SER 11 VAL 12 ALA 13 PRO 14 GLY 15 LYS 16 THR 17 ALA 18 ARG 19 ILE 20 THR 21 CYS 22 GLY 23 GLY 24 ASN 25 ASN 26 ILE 27 GLY 28 SER 29 LYS 30 SER 31 VAL 32 HIS 33 TRP 34 TYR 35 GLN 36 GLN 37 LYS 38 PRO 39 GLY 40 GLN 41 ALA 42 PRO 43 VAL 44 LEU 45 VAL 46 VAL 47 TYR 48 ASP 49 ASP 50 SER 51 ASP 52 ARG 53 PRO 54 SER 55 GLY 56 ILE 57 PRO 58 GLU 59 ARG 60 PHE 61 SER 62 GLY 63 SER 64 ASN 65 SER 66 GLY 67 ASN 68 THR 69 ALA 70 THR 71 LEU 72 THR 73 ILE 74 SER 75 ARG 76 VAL 77 GLU 78 ALA 79 GLY 80 ASP 81 GLU 82 ALA 83 ASP 84 TYR 85 TYR 86 CYS 87 GLN 88 VAL 89 TRP 90 ASP 91 SER 92 SER 93 SER 94 VAL 95 VAL 96 PHE 97 GLY 98 GLY 99 GLY 100 THR 101 LYS 102 LEU 103 THR 104 VAL 105 LEU 106 ARG 107 THR 108 VAL 109 ALA 110 ALA 111 PRO 112 SER 113 VAL 114 PHE 115 ILE 116 PHE 117 PRO 118 PRO 119 SER 120 ASP 121 GLU 122 GLN 123 LEU 124 LYS 125 SER 126 GLY 127 THR 128 ALA 129 SER 130 VAL 131 VAL 132 CYS 133 LEU 134 LEU 135 ASN 136 ASN 137 PHE 138 TYR 139 PRO 140 ARG 141 GLU 142 ALA 143 LYS 144 VAL 145 GLN 146 TRP 147 LYS 148 VAL 149 ASP 150 ASN 151 ALA 152 LEU 153 GLN 154 SER 155 GLY 156 ASN 157 SER 158 GLN 159 GLU 160 SER 161 VAL 162 THR 163 GLU 164 GLN 165 ASP 166 SER 167 LYS 168 ASP 169 SER 170 THR 171 TYR 172 SER 173 LEU 174 SER 175 SER 176 THR 177 LEU 178 THR 179 LEU 180 SER 181 LYS 182 ALA 183 ASP 184 TYR 185 GLU 186 LYS 187 HIS 188 LYS 189 VAL 190 TYR 191 ALA 192 CYS 193 GLU 194 VAL 195 THR 196 HIS 197 GLN 198 GLY 199 LEU 200 SER 201 SER 202 PRO 203 VAL 204 THR 205 LYS 206 SER 207 PHE 208 ASN 209 ARG 210 GLY 211 GLU 212 CYS 213
Unit 3	VAL 2 GLN 3 LEU 4 VAL 5 GLN 6 SER 7 GLY 8 ALA 9 GLU 10 VAL 11 LYS 12 LYS 13 PRO 14 GLY 15 SER 16 SER 17 VAL 18 LYS 19 VAL 20 SER 21 CYS 22 GLU 23 TYR 32 VAL 33 ILE 34 THR 35 TRP 36 VAL 37 ARG 38 GLN 39 ALA 40 PRO 41 GLY 42 GLN 43 GLY 44 LEU 45 GLU 46 TRP 47 MET 48 GLY 49 GLY 50 PHE 51 ILE 52 PRO 53 THR 54 PHE 55 ARG 56 THR 57 ALA 58 MET 59 TYR 60 ALA 61 GLN 62 GLY 63 PHE 64 GLN 65 GLY 66 ARG 67 VAL 68 THR 69 ILE 70 THR 71 ALA 79 TYR 80 MET 81 GLU 82 LEU 83 THR 84 ASN 85 LEU 86 ARG 87 SER 88 GLU 89 ASP 90 THR 91 ALA 92 VAL 93 TYR 94 TYR 95 CYS 96 ALA 97 ARG 98 GLY 99 PRO 100 LEU 101 SER 102 ARG 103 GLY 104 TYR 105 TYR 106 ASP 107 TYR 108 TRP 109 GLY 110 GLN 111 GLY 112 THR 113 LEU 114 VAL 115 THR 116 VAL 117 SER 118 SER 119 ALA 120 SER 121 THR 122 LYS 123 GLY 124 PRO 125 SER 126 VAL 127 PHE 128 PRO 129 LEU 130 ALA 131 PRO 132 SER 133 SER 134 LYS 135 GLY 139 GLY 140 THR 141 ALA 142 ALA 143 LEU 144 GLY 145 CYS 146 LEU 147 VAL 148 LYS 149 ASP 150 TYR 151 PHE 152 PRO 153 GLU 154 PRO 155 VAL 156 THR 157 VAL 158 SER 159 TRP 160 ASN 161 SER 162 GLY 163 ALA 164 LEU 165 THR 166 SER 167 GLY 168 VAL 169 HIS 170 THR 171 PHE 172 PRO 173 ALA 174 VAL 175 LEU 176 GLN 177 SER 178 SER 179 GLY 180 LEU 181 TYR 182 SER 183 LEU 184 SER 185 SER 186 VAL 187 VAL 188 THR 189 VAL 190 PRO 191 SER 192 SER 193 SER 194 LEU 195 GLY 196 THR 197 GLN 198 THR 199 TYR 200 ILE 201 CYS 202 ASN 203 VAL 204 ASN 205 HIS 206 LYS 207 PRO 208 SER 209 ASN 210 THR 211 LYS 212 VAL 213 ASP 214 LYS 215 LYS 216 ALA 217 GLU 218 PRO 219 LYS 220 SER 221 CYS 222
Unit 4	SER 1 TYR 2 VAL 3 LEU 4 THR 5 GLN 6 PRO 7 PRO 8 SER 9 VAL 10 SER 11 VAL 12 ALA 13 PRO 14 GLY 15 LYS 16 THR 17 ALA 18 ARG 19 ILE 20 THR 21 CYS 22 GLY 23 GLY 24 ASN 25 ASN 26 ILE 27 GLY 28 SER 29 LYS 30 SER 31 VAL 32 HIS 33 TRP 34 TYR 35 GLN 36 GLN 37 LYS 38 PRO 39 GLY 40 GLN 41 ALA 42 PRO 43 VAL 44 LEU 45 VAL 46 VAL 47 TYR 48 ASP 49 ASP 50 SER 51 ASP 52 ARG 53 PRO 54 SER 55 GLY 56 ILE 57 PRO 58 GLU 59 ARG 60 PHE 61 SER 62 GLY 63 SER 64 ASN 65 SER 66 GLY 67 ASN 68 THR 69 ALA 70 THR 71 LEU 72 THR 73 ILE 74 SER 75 ARG 76 VAL 77 GLU 78 ALA 79 GLY 80 ASP 81 GLU 82 ALA 83 ASP 84 TYR 85 TYR 86 CYS 87 GLN 88 VAL 89 TRP 90 ASP 91 SER 92 SER 93 SER 94 VAL 95 VAL 96 PHE 97 GLY 98 GLY 99 GLY 100 THR 101 LYS 102 LEU 103 THR 104 VAL 105 LEU 106 ARG 107 THR 108 VAL 109 ALA 110 ALA 111 PRO 112 SER 113 VAL 114 PHE 115 ILE 116 PHE 117 PRO 118 PRO 119 SER 120 ASP 121 GLU 122 GLN 123 LEU 124 LYS 125 SER 126 GLY 127 THR 128 ALA 129 SER 130 VAL 131 VAL 132 CYS 133 LEU 134 LEU 135 ASN 136 ASN 137 PHE 138 TYR 139 PRO 140 ARG 141 GLU 142 ALA 143 LYS 144 VAL 145 GLN 146 TRP 147 LYS 148 VAL 149 ASP 150 ASN 151 ALA 152 LEU 153 GLN 154 SER 155 GLY 156 ASN 157 SER 158 GLN 159 GLU 160 SER 161 VAL 162 THR 163 GLU 164 GLN 165 ASP 166 SER 167 LYS 168 ASP 169 SER 170 THR 171 TYR 172 SER 173 LEU 174 SER 175 SER 176 THR 177 LEU 178 THR 179 LEU 180 SER 181 LYS 182 ALA 183 ASP 184 TYR 185 GLU 186 LYS 187 HIS 188 LYS 189 VAL 190 TYR 191 ALA 192 CYS 193 GLU 194 VAL 195 THR 196 HIS 197 GLN 198 GLY 199 LEU 200 SER 201 SER 202 PRO 203 VAL 204 THR 205 LYS 206 SER 207 PHE 208 ASN 209 ARG 210 GLY 211 GLU 212
Unit 5	GLN 1 VAL 2 GLN 3 LEU 4 VAL 5 GLN 6 SER 7 GLY 8 ALA 9 GLU 10 VAL 11 LYS 12 LYS 13 PRO 14 GLY 15 SER 16 SER 17 VAL 18 LYS 19 VAL 20 SER 21 CYS 22 GLU 23 ALA 24 SER 25 GLY 26 GLY 27 THR 28 LEU 29 SER 30 ASN 31 TYR 32 VAL 33 ILE 34 THR 35 TRP 36 VAL 37 ARG 38 GLN 39 ALA 40 PRO 41 GLY 42 GLN 43 GLY 44 LEU 45 GLU 46 TRP 47 MET 48 GLY 49 GLY 50 PHE 51 ILE 52 PRO 53 THR 54 PHE 55 ARG 56 THR 57 ALA 58 MET 59 TYR 60 ALA 61 GLN 62 GLY 63 PHE 64 GLN 65 GLY 66 ARG 67 VAL 68 THR 69 ILE 70 THR 71 ALA 72 ASP 73 GLU 74 SER 75 THR 76 SER 77 ILE 78 ALA 79 TYR 80 MET 81 GLU 82 LEU 83 THR 84 ASN 85 LEU 86 ARG 87 SER 88 GLU 89 ASP 90 THR 91 ALA 92 VAL 93 TYR 94 TYR 95 CYS 96 ALA 97 ARG 98 GLY 99 PRO 100 LEU 101 SER 102 ARG 103 GLY 104 TYR 105 TYR 106 ASP 107 TYR 108 TRP 109 GLY 110 GLN 111 GLY 112 THR 113 LEU 114 VAL 115 THR 116 VAL 117 SER 118 SER 119 ALA 120 SER 121 THR 122 LYS 123 GLY 124 PRO 125 SER 126 VAL 127 PHE 128 PRO 129 LEU 130 ALA 131 PRO 132 GLY 139 GLY 140 THR 141 ALA 142 ALA 143 LEU 144 GLY 145 CYS 146 LEU 147 VAL 148 LYS 149 ASP 150 TYR 151 PHE 152 PRO 153 GLU 154 PRO 155 VAL 156 THR 157 VAL 158 SER 159 TRP 160 ASN 161 SER 162 GLY 163 ALA 164 LEU 165 THR 166 SER 167 GLY 168 VAL 169 HIS 170 THR 171 PHE 172 PRO 173 ALA 174 VAL 175 LEU 176 GLN 177 SER 178 SER 179 GLY 180 LEU 181 TYR 182 SER 183 LEU 184 SER 185 SER 186 VAL 187 VAL 188 THR 189 VAL 190 PRO 191 SER 192 SER 193 SER 194 LEU 195 GLY 196 THR 197 GLN 198 THR 199 TYR 200 ILE 201 CYS 202 ASN 203 VAL 204 ASN 205 HIS 206 LYS 207 PRO 208 SER 209 ASN 210 THR 211 LYS 212 VAL 213 ASP 214 LYS 215 LYS 216 ALA 217 GLU 218 PRO 219 LYS 220 SER 221
Unit 6	THR 435 GLY 436 TRP 437 LEU 438 ALA 439 GLY 440 LEU 441 PHE 442 TYR 443 GLN 444 HIS 445 LYS 446
Unit 7	SER 0 SER 1 TYR 2 VAL 3 LEU 4 THR 5 GLN 6 PRO 7 PRO 8 SER 9 VAL 10 SER 11 VAL 12 ALA 13 PRO 14 GLY 15 LYS 16 THR 17 ALA 18 ARG 19 ILE 20 THR 21 CYS 22 GLY 23 GLY 24 ASN 25 ASN 26 ILE 27 GLY 28 SER 29 LYS 30 SER 31 VAL 32 HIS 33 TRP 34 TYR 35 GLN 36 GLN 37 LYS 38 PRO 39 GLY 40 GLN 41 ALA 42 PRO 43 VAL 44 LEU 45 VAL 46 VAL 47 TYR 48 ASP 49 ASP 50 SER 51 ASP 52 ARG 53 PRO 54 SER 55 GLY 56 ILE 57 PRO 58 GLU 59 ARG 60 PHE 61 SER 62 GLY 63 SER 64 ASN 65 SER 66 GLY 67 ASN 68 THR 69 ALA 70 THR 71 LEU 72 THR 73 ILE 74 SER 75 ARG 76 VAL 77 GLU 78 ALA 79 GLY 80 ASP 81 GLU 82 ALA 83 ASP 84 TYR 85 TYR 86 CYS 87 GLN 88 VAL 89 TRP 90 ASP 91 SER 92 SER 93 SER 94 VAL 95 VAL 96 PHE 97 GLY 98 GLY 99 GLY 100 THR 101 LYS 102 LEU 103 THR 104 VAL 105 LEU 106 ARG 107 THR 108 VAL 109 ALA 110 ALA 111 PRO 112 SER 113 VAL 114 PHE 115 ILE 116 PHE 117 PRO 118 PRO 119 SER 120 ASP 121 GLU 122 GLN 123 LEU 124 LYS 125 SER 126 GLY 127 THR 128 ALA 129 SER 130 VAL 131 VAL 132 CYS 133 LEU 134 LEU 135 ASN 136 ASN 137 PHE 138 TYR 139 PRO 140 ARG 141 GLU 142 ALA 143 LYS 144 VAL 145 GLN 146 TRP 147 LYS 148 VAL 149 ASP 150 ASN 151 ALA 152 LEU 153 GLN 154 SER 155 GLY 156 ASN 157 SER 158 GLN 159 GLU 160 SER 161 VAL 162 THR 163 GLU 164 GLN 165 ASP 166 SER 167 LYS 168 ASP 169 SER 170 THR 171 TYR 172 SER 173 LEU 174 SER 175 SER 176 THR 177 LEU 178 THR 179 LEU 180 SER 181 LYS 182 ALA 183 ASP 184 TYR 185 GLU 186 LYS 187 HIS 188 LYS 189 VAL 190 TYR 191 ALA 192 CYS 193 GLU 194 VAL 195 THR 196 HIS 197 GLN 198 GLY 199 LEU 200 SER 201 SER 202 PRO 203 VAL 204 THR 205 LYS 206 SER 207 PHE 208 ASN 209 ARG 210 GLY 211 GLU 212

Ligands

Unit 8

SO4 501