4JS4 - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF E. COLI EXONUCLEASE I IN COMPLEX WITH A OLIGONUCLEOTIDE
• Keywords: EXONUCLEASE, PROCESSIVE, DNA REPAIR, DNAQ SUPERFAMILY, 3'-5' EXONUCLEASE, HYDROLASE-DNA COMPLEX
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	4JS4	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Other macromolecule	DT16 OLIGONUCLEOTIDE	C	15	316	0
2	Other macromolecule	DT16 OLIGONUCLEOTIDE	D	14	295	0
3	Protein	EXODEOXYRIBONUCLEASE I	A	468	3597	0
4	Protein	EXODEOXYRIBONUCLEASE I	B	461	3501	0
5	Ligand	EXODEOXYRIBONUCLEASE I	A	8	0	40
total				966	7709	40

Proteins

Unit 3

GLN 8 SER 9 THR 10 PHE 11 LEU 12 PHE 13 HIS 14 ASP 15 TYR 16 GLU 17 THR 18 PHE 19 GLY 20 THR 21 HIS 22 PRO 23 ALA 24 LEU 25 ASP 26 ARG 27 PRO 28 ALA 29 GLN 30 PHE 31 ALA 32 ALA 33 ILE 34 ARG 35 THR 36 ASP 37 SER 38 GLU 39 PHE 40 ASN 41 VAL 42 ILE 43 GLY 44 GLU 45 PRO 46 GLU 47 VAL 48 PHE 49 TYR 50 CYS 51 LYS 52 PRO 53 ALA 54 ASP 55 ASP 56 TYR 57 LEU 58 PRO 59 GLN 60 PRO 61 GLY 62 ALA 63 VAL 64 LEU 65 ILE 66 THR 67 GLY 68 ILE 69 THR 70 PRO 71 GLN 72 GLU 73 ALA 74 ARG 75 ALA 76 LYS 77 GLY 78 GLU 79 ASN 80 GLU 81 ALA 82 ALA 83 PHE 84 ALA 85 ALA 86 ARG 87 ILE 88 HIS 89 SER 90 LEU 91 PHE 92 THR 93 VAL 94 PRO 95 LYS 96 THR 97 CYS 98 ILE 99 LEU 100 GLY 101 TYR 102 ASN 103 ASN 104 VAL 105 ARG 106 PHE 107 ASP 108 ASP 109 GLU 110 VAL 111 THR 112 ARG 113 ASN 114 ILE 115 PHE 116 TYR 117 ARG 118 ASN 119 PHE 120 TYR 121 ASP 122 PRO 123 TYR 124 ALA 125 TRP 126 SER 127 TRP 128 GLN 129 HIS 130 ASP 131 ASN 132 SER 133 ARG 134 TRP 135 ASP 136 LEU 137 LEU 138 ASP 139 VAL 140 MET 141 ARG 142 ALA 143 CYS 144 TYR 145 ALA 146 LEU 147 ARG 148 PRO 149 GLU 150 GLY 151 ILE 152 ASN 153 TRP 154 PRO 155 GLU 156 ASN 157 ASP 158 ASP 159 GLY 160 LEU 161 PRO 162 SER 163 PHE 164 ARG 165 LEU 166 GLU 167 HIS 168 LEU 169 THR 170 LYS 171 ALA 172 ASN 173 GLY 174 ILE 175 GLU 176 HIS 177 SER 178 ASN 179 ALA 180 HIS 181 ASP 182 ALA 183 MET 184 ALA 185 ASP 186 VAL 187 TYR 188 ALA 189 THR 190 ILE 191 ALA 192 MET 193 ALA 194 LYS 195 LEU 196 VAL 197 LYS 198 THR 199 ARG 200 GLN 201 PRO 202 ARG 203 LEU 204 PHE 205 ASP 206 TYR 207 LEU 208 PHE 209 THR 210 HIS 211 ARG 212 ASN 213 LYS 214 HIS 215 LYS 216 LEU 217 MET 218 ALA 219 LEU 220 ILE 221 ASP 222 VAL 223 PRO 224 GLN 225 MET 226 LYS 227 PRO 228 LEU 229 VAL 230 HIS 231 VAL 232 SER 233 GLY 234 MET 235 PHE 236 GLY 237 ALA 238 TRP 239 ARG 240 GLY 241 ASN 242 THR 243 SER 244 TRP 245 VAL 246 ALA 247 PRO 248 LEU 249 ALA 250 TRP 251 HIS 252 PRO 253 GLU 254 ASN 255 ARG 256 ASN 257 ALA 258 VAL 259 ILE 260 MET 261 VAL 262 ASP 263 LEU 264 ALA 265 GLY 266 ASP 267 ILE 268 SER 269 PRO 270 LEU 271 LEU 272 GLU 273 LEU 274 ASP 275 SER 276 ASP 277 THR 278 LEU 279 ARG 280 GLU 281 ARG 282 LEU 283 TYR 284 THR 285 ALA 286 LYS 287 THR 288 ASP 289 LEU 290 GLY 291 ASP 292 ASN 293 ALA 294 ALA 295 VAL 296 PRO 297 VAL 298 LYS 299 LEU 300 VAL 301 HIS 302 ILE 303 ASN 304 LYS 305 CYS 306 PRO 307 VAL 308 LEU 309 ALA 310 GLN 311 ALA 312 ASN 313 THR 314 LEU 315 ARG 316 PRO 317 GLU 318 ASP 319 ALA 320 ASP 321 ARG 322 LEU 323 GLY 324 ILE 325 ASN 326 ARG 327 GLN 328 HIS 329 CYS 330 LEU 331 ASP 332 ASN 333 LEU 334 LYS 335 ILE 336 LEU 337 ARG 338 GLU 339 ASN 340 PRO 341 GLN 342 VAL 343 ARG 344 GLU 345 LYS 346 VAL 347 VAL 348 ALA 349 ILE 350 PHE 351 ALA 352 GLU 353 ALA 354 GLU 355 PRO 356 PHE 357 THR 358 PRO 359 SER 360 ASP 361 ASN 362 VAL 363 ASP 364 ALA 365 GLN 366 LEU 367 TYR 368 ASN 369 GLY 370 PHE 371 PHE 372 SER 373 ASP 374 ALA 375 ASP 376 ARG 377 ALA 378 ALA 379 MET 380 LYS 381 ILE 382 VAL 383 LEU 384 GLU 385 THR 386 GLU 387 PRO 388 ARG 389 ASN 390 LEU 391 PRO 392 ALA 393 LEU 394 ASP 395 ILE 396 THR 397 PHE 398 VAL 399 ASP 400 LYS 401 ARG 402 ILE 403 GLU 404 LYS 405 LEU 406 LEU 407 PHE 408 ASN 409 TYR 410 ARG 411 ALA 412 ARG 413 ASN 414 PHE 415 PRO 416 GLY 417 THR 418 LEU 419 ASP 420 TYR 421 ALA 422 GLU 423 GLN 424 GLN 425 ARG 426 TRP 427 LEU 428 GLU 429 HIS 430 ARG 431 ARG 432 GLN 433 VAL 434 PHE 435 THR 436 PRO 437 GLU 438 PHE 439 LEU 440 GLN 441 GLY 442 TYR 443 ALA 444 ASP 445 GLU 446 LEU 447 GLN 448 MET 449 LEU 450 VAL 451 GLN 452 GLN 453 TYR 454 ALA 455 ASP 456 ASP 457 LYS 458 GLU 459 LYS 460 VAL 461 ALA 462 LEU 463 LEU 464 LYS 465 ALA 466 LEU 467 TRP 468 GLN 469 TYR 470 ALA 471 GLU 472 GLU 473 ILE 474 VAL 475

Unit 4

GLN 8 SER 9 THR 10 PHE 11 LEU 12 PHE 13 HIS 14 ASP 15 TYR 16 GLU 17 THR 18 PHE 19 GLY 20 THR 21 HIS 22 PRO 23 ALA 24 LEU 25 ASP 26 ARG 27 PRO 28 ALA 29 GLN 30 PHE 31 ALA 32 ALA 33 ILE 34 ARG 35 THR 36 ASP 37 SER 38 GLU 39 PHE 40 ASN 41 VAL 42 ILE 43 GLY 44 GLU 45 PRO 46 GLU 47 VAL 48 PHE 49 TYR 50 CYS 51 LYS 52 PRO 53 ALA 54 ASP 55 ASP 56 TYR 57 LEU 58 PRO 59 GLN 60 PRO 61 GLY 62 ALA 63 VAL 64 LEU 65 ILE 66 THR 67 GLY 68 ILE 69 THR 70 PRO 71 GLN 72 GLU 73 ALA 74 ARG 75 ALA 76 LYS 77 GLY 78 GLU 79 ASN 80 GLU 81 ALA 82 ALA 83 PHE 84 ALA 85 ALA 86 ARG 87 ILE 88 HIS 89 SER 90 LEU 91 PHE 92 THR 93 VAL 94 PRO 95 LYS 96 THR 97 CYS 98 ILE 99 LEU 100 GLY 101 TYR 102 ASN 103 ASN 104 VAL 105 ARG 106 PHE 107 ASP 108 ASP 109 GLU 110 VAL 111 THR 112 ARG 113 ASN 114 ILE 115 PHE 116 TYR 117 ARG 118 ASN 119 PHE 120 TYR 121 ASP 122 PRO 123 TYR 124 ALA 125 TRP 126 SER 127 TRP 128 GLN 129 HIS 130 ASP 131 ASN 132 SER 133 ARG 134 TRP 135 ASP 136 LEU 137 LEU 138 ASP 139 VAL 140 MET 141 ARG 142 ALA 143 CYS 144 TYR 145 ALA 146 LEU 147 ARG 148 PRO 149 GLU 150 GLY 151 ILE 152 ASN 153 TRP 154 PRO 155 GLU 156 ASN 157 ASP 158 ASP 159 GLY 160 LEU 161 PRO 162 SER 163 PHE 164 ARG 165 LEU 166 GLU 167 HIS 168 LEU 169 THR 170 LYS 171 ALA 172 ASN 173 GLY 174 ILE 175 GLU 176 ALA 180 HIS 181 ASP 182 ALA 183 MET 184 ALA 185 ASP 186 VAL 187 TYR 188 ALA 189 THR 190 ILE 191 ALA 192 MET 193 ALA 194 LYS 195 LEU 196 VAL 197 LYS 198 THR 199 ARG 200 GLN 201 PRO 202 ARG 203 LEU 204 PHE 205 ASP 206 TYR 207 LEU 208 PHE 209 THR 210 HIS 211 ARG 212 ASN 213 LYS 214 HIS 215 LYS 216 LEU 217 MET 218 ALA 219 LEU 220 ILE 221 ASP 222 VAL 223 PRO 224 GLN 225 MET 226 LYS 227 PRO 228 LEU 229 VAL 230 HIS 231 VAL 232 SER 233 GLY 234 MET 235 PHE 236 GLY 237 ALA 238 TRP 239 ARG 240 GLY 241 ASN 242 THR 243 SER 244 TRP 245 VAL 246 ALA 247 PRO 248 LEU 249 ALA 250 TRP 251 HIS 252 PRO 253 GLU 254 ASN 255 ARG 256 ASN 257 ALA 258 VAL 259 ILE 260 MET 261 VAL 262 ASP 263 LEU 264 ALA 265 GLY 266 ASP 267 ILE 268 SER 269 PRO 270 LEU 271 LEU 272 GLU 273 LEU 274 ASP 275 SER 276 ASP 277 THR 278 LEU 279 ARG 280 GLU 281 ARG 282 LEU 283 TYR 284 THR 285 ALA 286 LYS 287 THR 288 ASP 289 LEU 290 GLY 291 ASP 292 ASN 293 ALA 294 ALA 295 VAL 296 PRO 297 VAL 298 LYS 299 LEU 300 VAL 301 HIS 302 ILE 303 ASN 304 LYS 305 CYS 306 PRO 307 VAL 308 LEU 309 ALA 310 GLN 311 ALA 312 ASN 313 THR 314 LEU 315 ARG 316 PRO 317 GLU 318 ASP 319 ALA 320 ASP 321 ARG 322 LEU 323 GLY 324 ILE 325 ASN 326 ARG 327 GLN 328 HIS 329 CYS 330 LEU 331 ASP 332 ASN 333 LEU 334 LYS 335 ILE 336 LEU 337 ARG 338 GLU 339 ASN 340 PRO 341 GLN 342 VAL 343 ARG 344 GLU 345 LYS 346 VAL 347 VAL 348 ALA 349 ILE 350 PHE 351 ALA 352 GLU 353 ALA 354 PRO 359 SER 360 ASP 361 ASN 362 VAL 363 ASP 364 ALA 365 GLN 366 LEU 367 TYR 368 ASN 369 GLY 370 PHE 371 PHE 372 SER 373 ASP 374 ALA 375 ASP 376 ARG 377 ALA 378 ALA 379 MET 380 LYS 381 ILE 382 VAL 383 LEU 384 GLU 385 THR 386 GLU 387 PRO 388 ARG 389 ASN 390 LEU 391 PRO 392 ALA 393 LEU 394 ASP 395 ILE 396 THR 397 PHE 398 VAL 399 ASP 400 LYS 401 ARG 402 ILE 403 GLU 404 LYS 405 LEU 406 LEU 407 PHE 408 ASN 409 TYR 410 ARG 411 ALA 412 ARG 413 ASN 414 PHE 415 PRO 416 GLY 417 THR 418 LEU 419 ASP 420 TYR 421 ALA 422 GLU 423 GLN 424 GLN 425 ARG 426 TRP 427 LEU 428 GLU 429 HIS 430 ARG 431 ARG 432 GLN 433 VAL 434 PHE 435 THR 436 PRO 437 GLU 438 PHE 439 LEU 440 GLN 441 GLY 442 TYR 443 ALA 444 ASP 445 GLU 446 LEU 447 GLN 448 MET 449 LEU 450 VAL 451 GLN 452 GLN 453 TYR 454 ALA 455 ASP 456 ASP 457 LYS 458 GLU 459 LYS 460 VAL 461 ALA 462 LEU 463 LEU 464 LYS 465 ALA 466 LEU 467 TRP 468 GLN 469 TYR 470 ALA 471 GLU 472 GLU 473 ILE 474 VAL 475

Other macromolecules

Unit 1	DA 2 DA 3 DA 4 DA 5 DA 6 DA 7 DA 8 DA 9 DA 10 DA 11 DA 12 DA 13 DA 14 DA 15 DA 16
Unit 2	DA 3 DA 4 DA 5 DA 6 DA 7 DA 8 DA 9 DA 10 DA 11 DA 12 DA 13 DA 14 DA 15 DA 16

Ligands

Unit 5

SO4 501 SO4 502 SO4 503 SO4 504 SO4 505 SO4 506 SO4 507 SO4 508