4JO1 - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF RABBIT MAB R56 FAB IN COMPLEX WITH V3 C HIV-1 JR-FL GP120
• Keywords: IG, ANTIBODY, IMMUNE SYSTEM-VIRAL PROTEIN COMPLEX
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	4JO1	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein		L	216	1596	0
2	Protein		H	213	1551	0
3	Protein	GP120	P	10	74	0
4	Protein		M	216	1596	0
5	Protein		I	213	1551	0
6	Protein	GP120	Q	10	74	0
7	Ligand		L	2	0	2
8	Ligand		H	1	0	1
9	Ligand		M	1	0	1
10	Ligand		I	1	0	1
11	Water			805	0	805
total				1688	6442	810

Proteins

Unit 1	GLN 2 VAL 3 LEU 4 THR 5 GLN 6 THR 7 PRO 8 SER 9 SER 10 VAL 11 SER 12 THR 13 ALA 14 VAL 15 GLY 16 SER 17 ALA 18 VAL 19 THR 20 ILE 21 ASN 22 CYS 23 GLN 24 SER 25 SER 26 GLN 27 ASN 27A VAL 27B TYR 28 SER 29 ASN 30 ASN 31 ASN 32 LEU 33 ALA 34 TRP 35 PHE 36 GLN 37 GLN 38 LYS 39 PRO 40 GLY 41 GLN 42 PRO 43 PRO 44 ARG 45 LEU 46 LEU 47 ILE 48 TYR 49 ASP 50 ALA 51 SER 52 LYS 53 LEU 54 ALA 55 SER 56 GLY 57 VAL 58 PRO 59 SER 60 ARG 61 PHE 62 LYS 63 GLY 64 SER 65 GLY 66 SER 67 GLY 68 THR 69 GLN 70 PHE 71 THR 72 PHE 73 THR 74 ILE 75 SER 76 ASP 77 VAL 78 GLN 79 CYS 80 ASP 81 ASP 82 ALA 83 ALA 84 THR 85 PHE 86 TYR 87 CYS 88 LEU 89 GLY 90 GLY 91 TYR 92 ASP 93 CYS 94 SER 95 SER 95A GLY 95B ASP 95C CYS 95D ALA 96 ALA 97 PHE 98 GLY 99 GLY 100 GLY 101 THR 102 GLU 103 VAL 104 VAL 105 VAL 106 ARG 107 GLY 108 ASP 109 PRO 110 VAL 111 ALA 112 PRO 113 THR 114 VAL 115 LEU 116 ILE 117 PHE 118 PRO 119 PRO 120 ALA 121 ALA 122 ASP 123 GLN 124 VAL 125 ALA 126 THR 127 GLY 128 THR 129 VAL 130 THR 131 ILE 132 VAL 133 CYS 134 VAL 135 ALA 136 ASN 137 LYS 138 TYR 139 PHE 140 PRO 141 ASP 142 VAL 143 THR 144 VAL 145 THR 146 TRP 147 GLU 148 VAL 149 ASP 150 GLY 151 THR 152 THR 153 GLN 154 THR 155 THR 156 GLY 157 ILE 158 GLU 159 ASN 160 SER 161 LYS 162 THR 163 PRO 164 GLN 165 ASN 166 SER 167 ALA 168 ASP 169 CYS 170 THR 171 TYR 172 ASN 173 LEU 174 SER 175 SER 176 THR 177 LEU 178 THR 179 LEU 180 THR 181 SER 182 THR 183 GLN 184 TYR 185 ASN 186 SER 187 HIS 188 LYS 189 GLU 190 TYR 191 THR 192 CYS 193 LYS 194 VAL 195 THR 196 GLN 197 GLY 198 THR 199 THR 200 SER 201 VAL 202 VAL 203 GLN 204 SER 205 PHE 206 ASN 207 ARG 208 GLY 209 ASP 210 CYS 211
Unit 2	GLN 2 SER 3 LEU 4 GLU 5 GLU 6 SER 7 GLY 8 GLY 9 ASP 10 LEU 11 VAL 12 GLN 13 PRO 14 GLY 15 ALA 16 SER 17 LEU 18 THR 19 LEU 20 THR 21 CYS 22 LYS 23 ALA 24 SER 25 GLY 26 PHE 27 SER 28 PHE 29 GLY 30 ASN 31 ASN 32 TYR 33 ASP 34 MET 35 CYS 35A TRP 36 VAL 37 ARG 38 GLN 39 ALA 40 PRO 41 GLY 42 LYS 43 GLY 44 LEU 45 GLU 46 TRP 47 ILE 48 GLY 49 CYS 50 ILE 51 GLU 52 THR 52A GLY 52B SER 53 SER 54 ASP 55 SER 56 ALA 57 ALA 58 TYR 59 ALA 60 THR 61 TRP 62 ALA 63 LYS 64 GLY 65 ARG 66 PHE 67 THR 68 ILE 69 SER 70 LYS 71 THR 72 SER 73 SER 74 THR 75 THR 76 VAL 77 THR 78 LEU 79 GLN 80 MET 81 THR 82 SER 82A LEU 82B THR 83 ALA 84 ALA 85 ASP 86 THR 87 ALA 88 THR 89 TYR 90 PHE 91 CYS 92 ALA 93 ARG 94 ASN 95 PHE 96 ASP 101 LEU 102 TRP 103 GLY 104 PRO 105 GLY 106 THR 107 LEU 108 VAL 109 ILE 110 VAL 111 SER 112 SER 113 GLY 114 GLN 115 PRO 116 LYS 117 ALA 118 PRO 119 SER 120 VAL 121 PHE 122 PRO 123 LEU 124 ALA 125 PRO 126 CYS 127 CYS 128 GLY 129 ASP 130 THR 131 PRO 132 SER 133 SER 134 THR 135 VAL 136 THR 137 LEU 138 GLY 139 CYS 140 LEU 141 VAL 142 LYS 143 GLY 144 TYR 145 LEU 146 PRO 147 GLU 148 PRO 149 VAL 150 THR 151 VAL 152 THR 153 TRP 154 ASN 155 SER 156 GLY 157 THR 158 LEU 159 THR 160 ASN 161 GLY 162 VAL 163 ARG 164 THR 165 PHE 166 PRO 167 SER 168 VAL 169 ARG 170 GLN 171 SER 172 SER 173 GLY 174 LEU 175 TYR 176 SER 177 LEU 178 SER 179 SER 180 VAL 181 VAL 182 SER 183 VAL 184 THR 185 SER 186 SER 187 SER 188 GLN 189 PRO 190 VAL 191 THR 192 CYS 193 ASN 194 VAL 195 ALA 196 HIS 197 PRO 198 ALA 199 THR 200 ASN 201 THR 202 LYS 203 VAL 204 ASP 205 LYS 206 THR 207 VAL 208 ALA 209 PRO 210 SER 211 THR 212 CYS 213
Unit 3	THR 303 ARG 304 LYS 305 SER 306 ILE 307 HIS 308 ILE 309 GLY 312 PRO 313 GLY 314
Unit 4	GLN 2 VAL 3 LEU 4 THR 5 GLN 6 THR 7 PRO 8 SER 9 SER 10 VAL 11 SER 12 THR 13 ALA 14 VAL 15 GLY 16 SER 17 ALA 18 VAL 19 THR 20 ILE 21 ASN 22 CYS 23 GLN 24 SER 25 SER 26 GLN 27 ASN 27A VAL 27B TYR 28 SER 29 ASN 30 ASN 31 ASN 32 LEU 33 ALA 34 TRP 35 PHE 36 GLN 37 GLN 38 LYS 39 PRO 40 GLY 41 GLN 42 PRO 43 PRO 44 ARG 45 LEU 46 LEU 47 ILE 48 TYR 49 ASP 50 ALA 51 SER 52 LYS 53 LEU 54 ALA 55 SER 56 GLY 57 VAL 58 PRO 59 SER 60 ARG 61 PHE 62 LYS 63 GLY 64 SER 65 GLY 66 SER 67 GLY 68 THR 69 GLN 70 PHE 71 THR 72 PHE 73 THR 74 ILE 75 SER 76 ASP 77 VAL 78 GLN 79 CYS 80 ASP 81 ASP 82 ALA 83 ALA 84 THR 85 PHE 86 TYR 87 CYS 88 LEU 89 GLY 90 GLY 91 TYR 92 ASP 93 CYS 94 SER 95 SER 95A GLY 95B ASP 95C CYS 95D ALA 96 ALA 97 PHE 98 GLY 99 GLY 100 GLY 101 THR 102 GLU 103 VAL 104 VAL 105 VAL 106 ARG 107 GLY 108 ASP 109 PRO 110 VAL 111 ALA 112 PRO 113 THR 114 VAL 115 LEU 116 ILE 117 PHE 118 PRO 119 PRO 120 ALA 121 ALA 122 ASP 123 GLN 124 VAL 125 ALA 126 THR 127 GLY 128 THR 129 VAL 130 THR 131 ILE 132 VAL 133 CYS 134 VAL 135 ALA 136 ASN 137 LYS 138 TYR 139 PHE 140 PRO 141 ASP 142 VAL 143 THR 144 VAL 145 THR 146 TRP 147 GLU 148 VAL 149 ASP 150 GLY 151 THR 152 THR 153 GLN 154 THR 155 THR 156 GLY 157 ILE 158 GLU 159 ASN 160 SER 161 LYS 162 THR 163 PRO 164 GLN 165 ASN 166 SER 167 ALA 168 ASP 169 CYS 170 THR 171 TYR 172 ASN 173 LEU 174 SER 175 SER 176 THR 177 LEU 178 THR 179 LEU 180 THR 181 SER 182 THR 183 GLN 184 TYR 185 ASN 186 SER 187 HIS 188 LYS 189 GLU 190 TYR 191 THR 192 CYS 193 LYS 194 VAL 195 THR 196 GLN 197 GLY 198 THR 199 THR 200 SER 201 VAL 202 VAL 203 GLN 204 SER 205 PHE 206 ASN 207 ARG 208 GLY 209 ASP 210 CYS 211
Unit 5	GLN 2 SER 3 LEU 4 GLU 5 GLU 6 SER 7 GLY 8 GLY 9 ASP 10 LEU 11 VAL 12 GLN 13 PRO 14 GLY 15 ALA 16 SER 17 LEU 18 THR 19 LEU 20 THR 21 CYS 22 LYS 23 ALA 24 SER 25 GLY 26 PHE 27 SER 28 PHE 29 GLY 30 ASN 31 ASN 32 TYR 33 ASP 34 MET 35 CYS 35A TRP 36 VAL 37 ARG 38 GLN 39 ALA 40 PRO 41 GLY 42 LYS 43 GLY 44 LEU 45 GLU 46 TRP 47 ILE 48 GLY 49 CYS 50 ILE 51 GLU 52 THR 52A GLY 52B SER 53 SER 54 ASP 55 SER 56 ALA 57 ALA 58 TYR 59 ALA 60 THR 61 TRP 62 ALA 63 LYS 64 GLY 65 ARG 66 PHE 67 THR 68 ILE 69 SER 70 LYS 71 THR 72 SER 73 SER 74 THR 75 THR 76 VAL 77 THR 78 LEU 79 GLN 80 MET 81 THR 82 SER 82A LEU 82B THR 83 ALA 84 ALA 85 ASP 86 THR 87 ALA 88 THR 89 TYR 90 PHE 91 CYS 92 ALA 93 ARG 94 ASN 95 PHE 96 ASP 101 LEU 102 TRP 103 GLY 104 PRO 105 GLY 106 THR 107 LEU 108 VAL 109 ILE 110 VAL 111 SER 112 SER 113 GLY 114 GLN 115 PRO 116 LYS 117 ALA 118 PRO 119 SER 120 VAL 121 PHE 122 PRO 123 LEU 124 ALA 125 PRO 126 CYS 127 CYS 128 GLY 129 ASP 130 THR 131 PRO 132 SER 133 SER 134 THR 135 VAL 136 THR 137 LEU 138 GLY 139 CYS 140 LEU 141 VAL 142 LYS 143 GLY 144 TYR 145 LEU 146 PRO 147 GLU 148 PRO 149 VAL 150 THR 151 VAL 152 THR 153 TRP 154 ASN 155 SER 156 GLY 157 THR 158 LEU 159 THR 160 ASN 161 GLY 162 VAL 163 ARG 164 THR 165 PHE 166 PRO 167 SER 168 VAL 169 ARG 170 GLN 171 SER 172 SER 173 GLY 174 LEU 175 TYR 176 SER 177 LEU 178 SER 179 SER 180 VAL 181 VAL 182 SER 183 VAL 184 THR 185 SER 186 SER 187 SER 188 GLN 189 PRO 190 VAL 191 THR 192 CYS 193 ASN 194 VAL 195 ALA 196 HIS 197 PRO 198 ALA 199 THR 200 ASN 201 THR 202 LYS 203 VAL 204 ASP 205 LYS 206 THR 207 VAL 208 ALA 209 PRO 210 SER 211 THR 212 CYS 213
Unit 6	THR 303 ARG 304 LYS 305 SER 306 ILE 307 HIS 308 ILE 309 GLY 312 PRO 313 GLY 314

Ligands

Unit 7	CA 301 CA 302
Unit 8	CA 301
Unit 9	CA 301
Unit 10	CA 301