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Title | CRYSTAL STRUCTURE OF THE ECTODOMAIN OF BOVINE VIRAL DIARRHEA E2 ENVELOPE PROTEIN | |
Keywords | BVDV1, E2, VIRAL ENVELOPE PROTEIN, E2 ENVELOPE PROTEIN, VIRA MEMBRANE FUSION, VIRAL SURFACE MEMBRANE, VIRAL PROTEIN | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 4JNT | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Protein | ENVELOPE GLYCOPROTEIN E2 | A | 324 | 2578 | 0 |
2 | Protein | ENVELOPE GLYCOPROTEIN E2 | B | 324 | 2578 | 0 |
3 | Ligand | C | 2 | 0 | 28 | |
4 | Ligand | D | 2 | 0 | 28 | |
5 | Ligand | E | 2 | 0 | 28 | |
6 | Ligand | F | 2 | 0 | 28 | |
7 | Ligand | G | 2 | 0 | 28 | |
8 | Ligand | H | 2 | 0 | 28 | |
9 | Ligand | I | 2 | 0 | 28 | |
10 | Ligand | J | 2 | 0 | 28 | |
total | 664 | 5156 | 224 |
Unit 1 | LEU694 ASP695 CYS696 LYS697 PRO698 GLU699 PHE700 SER701 TYR702 ALA703 ILE704 ALA705 LYS706 ASP707 GLU708 ARG709 ILE710 GLY711 GLN712 LEU713 GLY714 ALA715 GLU716 GLY717 LEU718 THR719 THR720 THR721 TRP722 LYS723 GLU724 TYR725 SER726 PRO727 GLY728 MET729 LYS730 LEU731 GLU732 ASP733 THR734 MET735 VAL736 ILE737 ALA738 TRP739 CYS740 GLU741 ASP742 GLY743 LYS744 LEU745 MET746 TYR747 LEU748 GLN749 ARG750 CYS751 THR752 ARG753 GLU754 THR755 ARG756 TYR757 LEU758 ALA759 ILE760 LEU761 HIS762 THR763 ARG764 ALA765 LEU766 PRO767 THR768 SER769 VAL770 VAL771 PHE772 LYS773 LYS774 LEU775 PHE776 ASP777 GLY778 ARG779 LYS780 GLN781 GLU782 ASP783 VAL784 VAL785 GLU786 MET787 ASP788 ASP789 ASN790 PHE791 GLU792 PHE793 GLY794 LEU795 CYS796 PRO797 CYS798 ASP799 ALA800 LYS801 PRO802 ILE803 VAL804 ARG805 GLY806 LYS807 PHE808 ASN809 THR810 THR811 LEU812 LEU813 ASN814 GLY815 PRO816 ALA817 PHE818 GLN819 MET820 VAL821 CYS822 PRO823 ILE824 GLY825 TRP826 THR827 GLY828 THR829 VAL830 SER831 CYS832 THR833 SER834 PHE835 ASN836 MET837 ASP838 THR839 LEU840 ALA841 THR842 THR843 VAL844 VAL845 ARG846 THR847 TYR848 ARG849 ARG850 SER851 LYS852 PRO853 PHE854 PRO855 HIS856 ARG857 GLN858 GLY859 CYS860 ILE861 THR862 GLN863 LYS864 ASN865 LEU866 GLY867 GLU868 ASP869 LEU870 HIS871 ASN872 CYS873 ILE874 LEU875 GLY876 GLY877 ASN878 TRP879 THR880 CYS881 VAL882 PRO883 GLY884 ASP885 GLN886 LEU887 LEU888 TYR889 LYS890 GLY891 GLY892 SER893 ILE894 GLU895 SER896 CYS897 LYS898 TRP899 CYS900 GLY901 TYR902 GLN903 PHE904 LYS905 GLU906 SER907 GLU908 GLY909 LEU910 PRO911 HIS912 TYR913 PRO914 ILE915 GLY916 LYS917 CYS918 LYS919 LEU920 GLU921 ASN922 GLU923 THR924 GLY925 TYR926 ARG927 LEU928 VAL929 ASP930 SER931 THR932 SER933 CYS934 ASN935 ARG936 GLU937 GLY938 VAL939 ALA940 ILE941 VAL942 PRO943 GLN944 GLY945 THR946 LEU947 LYS948 CYS949 LYS950 ILE951 GLY952 LYS953 THR954 THR955 VAL956 GLN957 VAL958 ILE959 ALA960 MET961 ASP962 THR963 LYS964 LEU965 GLY966 PRO967 MET968 PRO969 CYS970 ARG971 PRO972 TYR973 GLU974 ILE975 ILE976 SER977 SER978 THR985 ALA986 CYS987 THR988 PHE989 ASN990 TYR991 THR992 LYS993 THR994 LEU995 LYS996 ASN997 LYS998 TYR999 PHE1000 GLU1001 PRO1002 ARG1003 ASP1004 SER1005 TYR1006 PHE1007 GLN1008 GLN1009 TYR1010 MET1011 LEU1012 LYS1013 GLY1014 GLU1015 TYR1016 GLN1017 TYR1018 TRP1019 PHE1020 ASP1021 LEU1022 GLU1023 |
Unit 2 | LEU694 ASP695 CYS696 LYS697 PRO698 GLU699 PHE700 SER701 TYR702 ALA703 ILE704 ALA705 LYS706 ASP707 GLU708 ARG709 ILE710 GLY711 GLN712 LEU713 GLY714 ALA715 GLU716 GLY717 LEU718 THR719 THR720 THR721 TRP722 LYS723 GLU724 TYR725 SER726 PRO727 GLY728 MET729 LYS730 LEU731 GLU732 ASP733 THR734 MET735 VAL736 ILE737 ALA738 TRP739 CYS740 GLU741 ASP742 GLY743 LYS744 LEU745 MET746 TYR747 LEU748 GLN749 ARG750 CYS751 THR752 ARG753 GLU754 THR755 ARG756 TYR757 LEU758 ALA759 ILE760 LEU761 HIS762 THR763 ARG764 ALA765 LEU766 PRO767 THR768 SER769 VAL770 VAL771 PHE772 LYS773 LYS774 LEU775 PHE776 ASP777 GLY778 ARG779 LYS780 GLN781 GLU782 ASP783 VAL784 VAL785 GLU786 MET787 ASP788 ASP789 ASN790 PHE791 GLU792 PHE793 GLY794 LEU795 CYS796 PRO797 CYS798 ASP799 ALA800 LYS801 PRO802 ILE803 VAL804 ARG805 GLY806 LYS807 PHE808 ASN809 THR810 THR811 LEU812 LEU813 ASN814 GLY815 PRO816 ALA817 PHE818 GLN819 MET820 VAL821 CYS822 PRO823 ILE824 GLY825 TRP826 THR827 GLY828 THR829 VAL830 SER831 CYS832 THR833 SER834 PHE835 ASN836 MET837 ASP838 THR839 LEU840 ALA841 THR842 THR843 VAL844 VAL845 ARG846 THR847 TYR848 ARG849 ARG850 SER851 LYS852 PRO853 PHE854 PRO855 HIS856 ARG857 GLN858 GLY859 CYS860 ILE861 THR862 GLN863 LYS864 ASN865 LEU866 GLY867 GLU868 ASP869 LEU870 HIS871 ASN872 CYS873 ILE874 LEU875 GLY876 GLY877 ASN878 TRP879 THR880 CYS881 VAL882 PRO883 GLY884 ASP885 GLN886 LEU887 LEU888 TYR889 LYS890 GLY891 GLY892 SER893 ILE894 GLU895 SER896 CYS897 LYS898 TRP899 CYS900 GLY901 TYR902 GLN903 PHE904 LYS905 GLU906 SER907 GLU908 GLY909 LEU910 PRO911 HIS912 TYR913 PRO914 ILE915 GLY916 LYS917 CYS918 LYS919 LEU920 GLU921 ASN922 GLU923 THR924 GLY925 TYR926 ARG927 LEU928 VAL929 ASP930 SER931 THR932 SER933 CYS934 ASN935 ARG936 GLU937 GLY938 VAL939 ALA940 ILE941 VAL942 PRO943 GLN944 GLY945 THR946 LEU947 LYS948 CYS949 LYS950 ILE951 GLY952 LYS953 THR954 THR955 VAL956 GLN957 VAL958 ILE959 ALA960 MET961 ASP962 THR963 LYS964 LEU965 GLY966 PRO967 MET968 PRO969 CYS970 ARG971 PRO972 TYR973 GLU974 ILE975 ILE976 SER977 SER978 THR985 ALA986 CYS987 THR988 PHE989 ASN990 TYR991 THR992 LYS993 THR994 LEU995 LYS996 ASN997 LYS998 TYR999 PHE1000 GLU1001 PRO1002 ARG1003 ASP1004 SER1005 TYR1006 PHE1007 GLN1008 GLN1009 TYR1010 MET1011 LEU1012 LYS1013 GLY1014 GLU1015 TYR1016 GLN1017 TYR1018 TRP1019 PHE1020 ASP1021 LEU1022 GLU1023 |
Unit 3 | NAG1 NAG2 |
Unit 4 | NAG1 NAG2 |
Unit 5 | NAG1 NAG2 |
Unit 6 | NAG1 NAG2 |
Unit 7 | NAG1 NAG2 |
Unit 8 | NAG1 NAG2 |
Unit 9 | NAG1 NAG2 |
Unit 10 | NAG1 NAG2 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |